Works Published in 2003

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Displaying works 21 - 40 of 72 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2003 journal article

Quantitative analysis of bristle number in Drosophila mutants identifies genes involved in neural development

CURRENT BIOLOGY, 13(16), 1388–1397.

By: K. Norga*, M. Gurganus n, C. Dilda n, A. Yamamoto n, R. Lyman n, P. Patel*, G. Rubin*, R. Hoskins*, T. Mackay n, H. Bellen*

MeSH headings : Animals; Drosophila / anatomy & histology; Drosophila / genetics; Drosophila / growth & development; Gene Expression Regulation, Developmental; Genes, Insect; Mutation; Peripheral Nerves / growth & development
TL;DR: The findings establish the use of quantitative trait analysis for functional genome annotation through forward genetics, and similar analyses of quantitative effects of P element insertions will facilitate the understanding of the genes affecting many other complex traits in Drosophila. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2003 journal article

Design and standards for genetic evaluation of swine seedstock populations

Journal of Animal Science, 81(10), 2409–2418.

By: T. Baas*, R. Goodwin*, L. Christian*, R. Johnson*, O. Robison n, J. Mabry*, K. Clark*, M. Tokach*, S. Henry*, P. Berger*

MeSH headings : Animals; Breeding / methods; Female; Male; Models, Genetic; Selection, Genetic; Swine / genetics
TL;DR: High levels of statistical accuracy and a large, representative sample of boars with restrictions on genetic relationships ensured that the program results included unbiased, highly accurate sire line data for growth, carcass, meat quality, and eating quality traits of economic importance. (via Semantic Scholar)
Source: NC State University Libraries
Added: August 6, 2018

2003 journal article

Analysis, characterization, and loci of the tuf genes in Lactobacillus and Bifidobacterium species and their direct application for species identification

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 69(11), 6908–6922.

MeSH headings : Adult; Animals; Bacterial Typing Techniques; Bifidobacterium / classification; Bifidobacterium / genetics; Cattle; Child; DNA, Bacterial / analysis; DNA, Ribosomal / analysis; Humans; Lactobacillus / classification; Lactobacillus / genetics; Molecular Sequence Data; Peptide Elongation Factor Tu / genetics; Phylogeny; RNA, Ribosomal, 16S / genetics; Sequence Analysis, DNA; Species Specificity; Transcription, Genetic
TL;DR: It is demonstrated that the synonymous substitution affecting this gene renders elongation factor Tu a reliable molecular clock for investigating evolutionary distances of lactobacilli and bifidobacteria. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2003 journal article

UV-acclimation responses in natural populations of cyanobacteria (Calothrix sp.)

ENVIRONMENTAL MICROBIOLOGY, 5(6), 473–483.

By: J. Dillon*, . Miller n & R. Castenholz*

MeSH headings : Acclimatization / physiology; Carbon / metabolism; Cyanobacteria / metabolism; Cyanobacteria / radiation effects; Hot Springs; Phenotype; Photosynthesis / physiology; Pigments, Biological / metabolism; Ultraviolet Rays
TL;DR: The response of photosynthetic carbon fixation in populations of cyanobacteria inhabiting a hot spring following acclimation to different UV treatments suggests that closely related natural cyanobacterial populations respond differently to natural irradiance conditions and may be adopting different strategies of UV tolerance. (via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action (Web of Science)
Source: Web Of Science
Added: August 6, 2018

2003 review

Structure of linkage disequilibrium in plants

[Review of ]. ANNUAL REVIEW OF PLANT BIOLOGY, 54, 357–374.

By: S. Flint-Garcia n, J. Thornsberry n & E. Buckler n

author keywords: gametic phase disequilibrium; allelic association; association mapping; recombination; quantitative trait loci (QTL)
MeSH headings : Animals; Humans; Linkage Disequilibrium / genetics; Models, Genetic; Plants / genetics; Species Specificity
TL;DR: The basic patterns of LD in plants will be better understood as more species are analyzed, and association mapping has been exploited to dissect quantitative trait loci (QTL). (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2003 patent

Polynucleotide encoding a Lactobacillus gasseri beta-glucuronidase polypeptide

Washington, DC: U.S. Patent and Trademark Office.

Source: NC State University Libraries
Added: August 6, 2018

2003 journal article

Lensectomy and vitrectomy decrease the rate of photoreceptor loss in rhodopsin P347L transgenic pigs

GRAEFES ARCHIVE FOR CLINICAL AND EXPERIMENTAL OPHTHALMOLOGY, 241(4), 298–308.

By: T. Mahmoud*, B. McCuen*, Y. Hao*, S. Moon*, M. Tatebayashi*, S. Stinnett*, R. Petters n, F. Wong*

MeSH headings : Animals; Animals, Genetically Modified; Cell Count; Disease Models, Animal; Fluorescent Antibody Technique, Indirect; Lens, Crystalline / surgery; Photoreceptor Cells, Vertebrate / metabolism; Photoreceptor Cells, Vertebrate / pathology; Retinal Degeneration / genetics; Retinal Degeneration / pathology; Retinal Degeneration / prevention & control; Rhodopsin / genetics; Rhodopsin / metabolism; Vitrectomy
TL;DR: Lensectomy and vitrectomy delay photoreceptor degeneration in rhodopsin P347L transgenic pigs, and lens-related rescue effect is a probable reason for the delayed degeneration. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2003 journal article

Isolation and characterization of a Lactobacillus plantarum bacteriophage, Phi JL-1, from a cucumber fermentation

INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY, 84(2), 225–235.

author keywords: bacteriophage; Lactobacillus plantarum; lactic acid bacteria; vegetable fermentation; cucumber fermentation
MeSH headings : Adsorption; Bacteriophages / genetics; Bacteriophages / isolation & purification; Bacteriophages / physiology; Cucumis sativus / microbiology; Culture Media / chemistry; DNA, Viral / analysis; Electrophoresis, Polyacrylamide Gel; Fermentation; Food Microbiology; Genome, Viral; Hydrogen-Ion Concentration; Kinetics; Lactobacillus / virology
TL;DR: A virulent Lactobacillus plantarum bacteriophage, PhiJL-1, was isolated from a commercial cucumber fermentation and sequenced to reveal a linear, double-stranded DNA that may be important for the development of controlled vegetable fermentations. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2003 journal article

Intron and polypeptide evolution of conserved NPA to NPA motif regions in plant aquaporins

Journal of the American Society for Horticultural Science, 128(4), 591–597.

Source: NC State University Libraries
Added: August 6, 2018

2003 journal article

Horizontally transferred genes in plant-parasitic nematodes: a high-throughput genomic approach

Genome Biology, 4(6), R39–1.

By: E. Scholl, J. Thorne, J. McCarter & D. Bird

Source: NC State University Libraries
Added: August 6, 2018

2003 journal article

Enhanced resistance to Helicoverpa zea in tobacco expressing an activated form of maize ribosome-inactivating protein

JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 51(12), 3568–3574.

By: P. Dowd n, W. Zuo n, J. Gillikin n, E. Johnson n & R. Boston n

author keywords: corn earworm; tobacco hornworm; Manduca; cigarette beetle; Lasioderma
MeSH headings : Animals; Coleoptera; Feeding Behavior; Larva; Manduca; Moths; Plant Extracts / genetics; Plant Extracts / metabolism; Plant Proteins / genetics; Plant Proteins / metabolism; Plants, Genetically Modified / genetics; Plants, Genetically Modified / metabolism; Ribosome Inactivating Proteins; Tobacco / genetics; Tobacco / metabolism; Zea mays
TL;DR: Progeny of two transgenic tobacco lines that expressed an activated form of maize ribosome-inactivating protein (RIP) had varying resistance to the insect species tested, providing further support for maize RIP having a role in resistance to maize-feeding insects. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (Web of Science; OpenAlex)
Source: Web Of Science
Added: August 6, 2018

2003 patent

Regulation of quinolate phosphoribosyl transferase expression by transformation with a tobacco quinolate phosphoribosyl transferase nucleic acid

Washington, DC: U.S. Patent and Trademark Office.

By: M. Conkling, W. Song & N. Mendu

Source: NC State University Libraries
Added: August 6, 2018

2003 journal article

Patterns of nucleotide variation in homoeologous regulatory genes in the allotetraploid Hawaiian silversword alliance (Asteraceae)

MOLECULAR ECOLOGY, 12(5), 1301–1313.

By: A. Lawton-Rauh n, R. Robichaux* & M. Purugganan n

author keywords: adaptive radiation; allopolyploidy; floral homeotic genes; gene duplication; MADS-box; polyploidy
MeSH headings : Asteraceae / genetics; Base Sequence; Chromosome Mapping; DNA Primers; Evolution, Molecular; Genes, Duplicate / genetics; Genes, Homeobox / genetics; Genetic Variation; Haplotypes; Molecular Sequence Data; Phylogeny; Polyploidy
TL;DR: Results suggest that differing evolutionary forces can affect duplicate loci arising from allopolyploidization, which is prevalent in a large number of eukaryotic organisms and is particularly widespread in flowering plants. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (Web of Science; OpenAlex)
Source: Web Of Science
Added: August 6, 2018

2003 journal article

Ontogenies in mice selected for high voluntary wheel-running activity. I. Mean ontogenies

EVOLUTION, 57(3), 646–657.

author keywords: artificial selection; body mass; correlated characters; food consumption; ontogeny; wheel running
MeSH headings : Analysis of Variance; Animals; Female; Male; Mice / classification; Mice / genetics; Mice, Inbred ICR; Motor Activity / genetics; Phylogeny; Running; Selection, Genetic; Sex Characteristics
TL;DR: Overall the results demonstrate strong effects of early‐age selection, genetic drift, and environmental variation on the evolution and expression of behavioral and morphological ontogenies, with selection changing not only the position of the morphologicalOntogeny but both the position and shape of the behavioral ontogeny. (via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action (Web of Science)
15. Life on Land (Web of Science)
Source: Web Of Science
Added: August 6, 2018

2003 journal article

Molecular population genetics of the Arabidopsis CLAVATA2 region: The genomic scale of variation and selection in a selfing species

Genetics, 163(3), 1083–1095.

Source: NC State University Libraries
Added: August 6, 2018

2003 journal article

Mixed-model reanalysis of primate data suggests tissue and species biases in oligonucleotide-based gene expression profiles

Genetics, 165(2), 747–757.

By: W. Hsieh, T. Chu, R. Wolfinger & G. Gibson

Source: NC State University Libraries
Added: August 6, 2018

2003 article

Microarray analysis - Genome-scale hypothesis scanning

Gibson, G. (2003, October). PLOS BIOLOGY, Vol. 1, pp. 28–29.

By: G. Gibson*

MeSH headings : Animals; Base Sequence; Computational Biology; Drosophila melanogaster / genetics; Drosophila melanogaster / physiology; Gene Expression Profiling; Genetic Techniques; Genome; Genome, Human; Genomics; Humans; Nucleic Acid Hybridization; Oligonucleotide Array Sequence Analysis / methods; Research Design; Sequence Analysis, DNA
TL;DR: Microarrays can survey genome-wide expression patterns and be used to identify a few genes of interest, now being creatively applied for hypothesis generation and testing. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2003 article

Merging ecology, molecular evolution, and functional genetics

Purugganan, M., & Gibson, G. (2003, May). MOLECULAR ECOLOGY, Vol. 12, pp. 1109–1112.

MeSH headings : Ecology; Evolution, Molecular; Genotype; Phenotype
TL;DR: While the use of molecular markers by ecologists has been fruitful, there is more to the molecules than their current dominant role in ecological research as mere genetic barcodes, and ecologists stand today at a crossroads that provide unprecedented opportunity to make connections between genes and ecological processes. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2003 journal article

Evidence for the adaptive evolution of the carbon fixation gene rbcL during diversification in temperature tolerance of a clade of hot spring cyanobacteria

MOLECULAR ECOLOGY, 12(5), 1237–1246.

author keywords: adaptation; cyanobacteria; molecular evolution; rbcL; RuBisCO
MeSH headings : Adaptation, Biological; Base Sequence; Cluster Analysis; Cyanobacteria / enzymology; Cyanobacteria / genetics; DNA Primers; Evolution, Molecular; Hot Springs / microbiology; Hydrophobic and Hydrophilic Interactions; Likelihood Functions; Molecular Sequence Data; Phylogeny; Protein Conformation; Ribulose-Bisphosphate Carboxylase / genetics; Temperature
TL;DR: Whether there is evidence for molecular adaptation of the carbon fixation gene rbcL for a clade of hot spring cyanobacteria in the genus Synechococcus that has diverged in thermotolerance is tested. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (Web of Science)
Source: Web Of Science
Added: August 6, 2018

2003 journal article

Contrasting selection pressures on components of the Ras-mediated signal transduction pathway in Drosophila

MOLECULAR ECOLOGY, 12(5), 1315–1323.

By: R. Riley n, W. Jin n & G. Gibson n

author keywords: Corkscrew; Drosophila melanogaster; Drk; Dsor1; HKA test; Ksr; nucleotide polymorphism; pole hole
MeSH headings : Animals; Base Sequence; DNA Primers; Drosophila / genetics; Drosophila / physiology; Drosophila Proteins / genetics; Genetic Variation; Genetics, Population; Molecular Sequence Data; Polymorphism, Single Nucleotide; Selection, Genetic; Signal Transduction
TL;DR: It is inferred that contrasting selection pressures act on six components of the Ras signal transduction pathway by comparing sequences obtained from 25 alleles of Drosophila melanogaster with one allele of the sibling species D. simulans. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

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