Works Published in 2006
Displaying works 21 - 40 of 78 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2006 review
Analysis of variance of microarray data
[Review of ]. Dna microarrays, part b: databases and statistics, 411, 214-. San Diego: Elsevier Academic Press Inc.
Source: NC State University Libraries
Added: August 6, 2018
2006 journal article
Transcriptional and functional analysis of oxalyl-coenzyme A (CoA) decarboxylase and formyl-CoA transferase genes from Lactobacillus acidophilus
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 72(3), 1891–1899.
MeSH headings : Carboxy-Lyases / genetics; Carboxy-Lyases / metabolism; Coenzyme A-Transferases / genetics; Coenzyme A-Transferases / metabolism; Gene Expression Regulation, Bacterial; Lactobacillus acidophilus / enzymology; Lactobacillus acidophilus / genetics; Lactobacillus acidophilus / growth & development; Oligonucleotide Array Sequence Analysis; Operon; Oxalates / metabolism; Reverse Transcriptase Polymerase Chain Reaction; Transcription, Genetic
TL;DR:
Transcriptional analysis using cDNA microarrays and reverse transcription-quantitative PCR revealed that mildly acidic conditions were a prerequisite for frc and oxc transcription, andOxalate-dependent induction of these genes occurred only in cells first adapted to subinhibitory concentrations of oxalate and then exposed to pH 5.5.
(via Semantic Scholar)
aem.asm.org (publisher PDF)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2006 journal article
The maize Mucronate mutation is a deletion in the 16-kDa gamma-zein gene that induces the unfolded protein response
PLANT JOURNAL, 48(3), 440–451.
author keywords: unfolded protein response (UPR); endosperm; protein body; opaque mutant
MeSH headings : Alleles; Amino Acid Sequence; Base Sequence; DNA Primers; Electrophoresis, Gel, Two-Dimensional; Frameshift Mutation; Gene Deletion; Molecular Sequence Data; Polymerase Chain Reaction; Sequence Homology, Amino Acid; Zea mays / genetics; Zein / chemistry; Zein / genetics
TL;DR:
Results indicate that the Mc phenotype results from a frame-shift mutation in the gene encoding the 16-kDa gamma-zein protein, leading to the unfolded protein response in developing endosperm.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2006 journal article
The genetic basis of prezygotic reproductive isolation between Drosophila santomea and D-yakuba due to mating preference
GENETICS, 173(1), 215–223.
MeSH headings : Animals; Chromosome Mapping; Chromosomes / genetics; Drosophila / cytology; Drosophila / genetics; Drosophila / physiology; Genetic Markers; Quantitative Trait Loci / genetics; Reproduction / genetics; Reproduction / physiology; Sexual Behavior, Animal / physiology; Zygote / metabolism
TL;DR:
QTL contributing to prezygotic reproductive isolation between the sibling species Drosophila santomea and D. yakuba is mapped and future high-resolution mapping and, ultimately, positional cloning will reveal whether these traits do indeed have a common genetic basis.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
5. Gender Equality
(OpenAlex)
15. Life on Land
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2006 journal article
The genetic basis of postzygotic reproductive isolation between Drosophila santomea and D-yakuba due to hybrid male sterility
GENETICS, 173(1), 225–233.
MeSH headings : Animals; Chromosome Mapping; Chromosomes / genetics; Crosses, Genetic; Drosophila / classification; Drosophila / genetics; Drosophila / physiology; Epistasis, Genetic; Genetic Markers; Hybridization, Genetic; Infertility, Male / genetics; Infertility, Male / physiopathology; Male; Pigmentation / genetics; Quantitative Trait Loci / genetics; Reproduction / genetics; Reproduction / physiology; Species Specificity; Zygote / metabolism
TL;DR:
Mapping quantitative trait loci affecting fertility of male hybrids between D. yakuba and its recently discovered sibling species, D. santomea, provides the basis for future high-resolution mapping and ultimately, molecular cloning of the interacting genes that contribute to hybrid sterility.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2006 journal article
Quantitative trait loci for locomotor behavior in Drosophila melanogaster
GENETICS, 174(1), 271–284.
MeSH headings : Animals; Behavior, Animal; Chromosome Mapping / methods; Crosses, Genetic; Drosophila melanogaster / genetics; Female; Genetic Complementation Test; Genome, Insect; Linkage Disequilibrium; Male; Motor Activity / genetics; Quantitative Trait Loci
TL;DR:
Linkage disequilibrium mapping in a population of 164 second chromosome substitution lines derived from a single natural population showed that polymorphisms at Ddc were associated with naturally occurring genetic variation in locomotor behavior, implicate variation in the synthesis of bioamines as a factor contributing to natural variation in Locomotor reactivity.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2006 journal article
Peptide aptamers that bind to a geminivirus replication protein interfere with viral replication in plant cells
JOURNAL OF VIROLOGY, 80(12), 5841–5853.
MeSH headings : Aptamers, Peptide / pharmacology; DNA, Viral / analysis; Geminiviridae / chemistry; Geminiviridae / drug effects; Geminiviridae / physiology; Peptide Library; Plant Cells; Plant Viruses / drug effects; Plants / virology; Plants, Genetically Modified; Thioredoxins / genetics; Thioredoxins / metabolism; Transfection; Two-Hybrid System Techniques; Viral Proteins / antagonists & inhibitors; Viral Proteins / genetics; Viral Proteins / metabolism; Viral Proteins / physiology; Virus Replication / drug effects
TL;DR:
The peptide aptamers characterized in these studies represent new tools for studying AL1 function and can serve as the basis for the development of crops with broad-based resistance to single-stranded DNA viruses.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
3. Good Health and Well-being
(OpenAlex)
13. Climate Action
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018
2006 article
On error prediction in circular systematic sampling
Jonsdottir, K. Y., Hoffmann, L. M., Hobolth, A., & Jensen, E. B. V. (2006, June). JOURNAL OF MICROSCOPY, Vol. 222, pp. 212–216.
author keywords: covariogram; error prediction; shape; stereology; stochastic processes; systematic sampling; variance estimation
TL;DR:
An extended covariogram model is discussed for estimating the precision of circular systematic sampling, motivated by recent developments in shape analysis of featureless planar objects.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2006 journal article
Localization of iron in Arabidopsis seed requires the vacuolar membrane transporter VIT1
SCIENCE, 314(5803), 1295–1298.
Contributors: S. Kim n, T. Punshon n, A. Lanzirotti n, L. Li n, J. Alonso n, J. Ecker n, J. Kaplan n, M. Guerinot n
MeSH headings : Arabidopsis / genetics; Arabidopsis / growth & development; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Cation Transport Proteins / genetics; Cation Transport Proteins / metabolism; Cotyledon / chemistry; Homeostasis; Hypocotyl / chemistry; Image Processing, Computer-Assisted; Intracellular Membranes / metabolism; Iron / analysis; Iron / metabolism; Manganese / analysis; Mutation; Plant Epidermis / chemistry; Plants, Genetically Modified; Recombinant Fusion Proteins / metabolism; Seedlings / growth & development; Seeds / chemistry; Seeds / metabolism; Tomography, X-Ray Computed; Vacuoles / chemistry; Vacuoles / metabolism; Zinc / analysis
TL;DR:
Using synchrotron x-ray fluorescence microtomography to directly visualize iron in Arabidopsis seeds, it is shown that iron is localized primarily to the provascular strands of the embryo.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science; OpenAlex)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018
2006 journal article
High affinity, high efficiency fibre-reactive dyes
COLORATION TECHNOLOGY, 122(4), 187–193.
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2006 journal article
Global genetic diversity and evolution of var genes associated with placental and severe childhood malaria
MOLECULAR AND BIOCHEMICAL PARASITOLOGY, 148(2), 169–180.
author keywords: malaria; Plasmodium falciparum; antigenic variation; var genes
MeSH headings : Amino Acid Sequence; Animals; Antigenic Variation / genetics; Child; Evolution, Molecular; Female; Genes, Protozoan; Genetic Variation; Humans; Malaria, Falciparum / parasitology; Malaria, Falciparum / physiopathology; Molecular Sequence Data; Placenta / parasitology; Placenta Diseases / parasitology; Plasmodium falciparum / genetics; Plasmodium falciparum / immunology; Pregnancy; Pregnancy Complications, Parasitic / parasitology; Sequence Analysis, DNA; Severity of Illness Index
TL;DR:
The analysis of var genes in Plasmodium falciparum found that UpsA vars are highly diverse between 22 world-wide parasite isolates, although they could be grouped into two broad clusters that may be separately recombining.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science; OpenAlex)
Source: Web Of Science
Added: August 6, 2018
2006 journal article
Dependence among sites in RNA evolution
MOLECULAR BIOLOGY AND EVOLUTION, 23(8), 1525–1537.
author keywords: RNA secondary structure; dependence among sites; substitution rate
MeSH headings : Animals; Computer Simulation; Evolution, Molecular; Markov Chains; Nucleic Acid Conformation; Phylogeny; RNA / chemistry; RNA / genetics; RNA, Ribosomal / chemistry; RNA, Ribosomal / genetics; Sequence Analysis, RNA
TL;DR:
An evolutionary model and a Bayesian inference procedure that are aimed at filling the gap in probabilistic models of genotype evolution are proposed and potential applications, including improved ancestral sequence inference and location of functionally interesting sites, are discussed.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
7. Affordable and Clean Energy
(OpenAlex)
15. Life on Land
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2006 journal article
Comparative genomics of the lactic acid bacteria
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 103(42), 15611–15616.
author keywords: evolutionary genomics; fermentation
MeSH headings : Animals; Bacterial Proteins / classification; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Biological Evolution; Food Microbiology; Gene Transfer, Horizontal; Genome, Bacterial; Genomics; Lactic Acid / metabolism; Lactobacillus / classification; Lactobacillus / genetics; Phylogeny; Streptococcaceae / classification; Streptococcaceae / genetics
TL;DR:
Phylogenetic analyses, comparison of gene content across the group, and reconstruction of ancestral gene sets indicate a combination of extensive gene loss and key gene acquisitions via horizontal gene transfer during the coevolution of lactic acid bacteria with their habitats.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(OpenAlex)
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2006 review
Allopolyploid origin of Cardamine asarifolia (Brassicaceae): Incongruence between plastid and nuclear ribosomal DNA sequences solved by a single-copy nuclear gene
[Review of ]. MOLECULAR PHYLOGENETICS AND EVOLUTION, 39(3), 759–786.
author keywords: Chalcone synthase gene; Cruciferae; flow cytometry; genome size; hybridization; nrDNA; polyploidy
MeSH headings : Acyltransferases / genetics; Base Sequence; Brassicaceae / enzymology; Brassicaceae / genetics; Chromosomes, Plant; DNA Primers; DNA, Plant / genetics; DNA, Ribosomal / genetics; Flow Cytometry; Plastids / genetics; Pollen; Polyploidy
TL;DR:
A phylogenetic analysis of the hexaploid Cardamine asarifolia, distributed in the southern European Alps and northern Apennines, revealed a marked discrepancy between the trnL-trnF region of cpDNA and internal transcribed spacer (nrDNA ITS) sequences.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2006 journal article
Quantitative genomics of aggressive behavior in Drosophila melanogaster
PLOS GENETICS, 2(9), 1386–1395.
MeSH headings : Aggression; Animals; Behavior, Animal; DNA Transposable Elements / genetics; Drosophila melanogaster / genetics; Drosophila melanogaster / physiology; Genes, Insect; Genomics / methods; Mutagenesis, Insertional; Phenotype; Selection, Genetic; Transcription, Genetic
TL;DR:
An assay to rapidly quantify aggressive behavior in Drosophila melanogaster is developed, and replicate selection lines with divergent levels of aggression are generated, and 15 novel genes affecting aggressive behavior are identified.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2006 review
Insulin signaling and limb-patterning: candidate pathways for the origin and evolutionary diversification of beetle 'horns'
[Review of ]. Heredity, 97(3), 179–191.
Source: NC State University Libraries
Added: August 6, 2018
2006 journal article
Evolution: The plastic transcriptorne
Current Biology, 16(8), R285–287.
Source: NC State University Libraries
Added: August 6, 2018
2006 journal article
Canonical Wnt signaling through Lef1 is required for hypothalamic neurogenesis
Development (Cambridge, England), 133(22), 4451–4461.
Source: NC State University Libraries
Added: August 6, 2018
2006 journal article
A murine specific expansion of the Rhox cluster involved in embryonic stem cell biology is under natural selection
BMC Genomics, 7.
Source: NC State University Libraries
Added: August 6, 2018
2006 review
The molecular genetic basis of plant adaptation
[Review of ]. American Journal of Botany, 93(7), 953–962.
Source: NC State University Libraries
Added: August 6, 2018
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