Works Published in 2013

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Displaying works 41 - 52 of 52 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2013 journal article

New Components of Drosophila Leg Development Identified through Genome Wide Association Studies

PLOS ONE, 8(4).

By: N. Grubbs n, M. Leach n, X. Su*, T. Petrisko*, J. Rosario n & J. Mahaffey n

MeSH headings : Animals; Cell Communication; Drosophila Proteins / antagonists & inhibitors; Drosophila Proteins / genetics; Drosophila Proteins / metabolism; Drosophila melanogaster / embryology; Drosophila melanogaster / genetics; Drosophila melanogaster / metabolism; Embryo, Nonmammalian; Extremities / embryology; Gene Expression Profiling; Gene Expression Regulation, Developmental; Gene Regulatory Networks; Genome-Wide Association Study; Imaginal Discs / embryology; Imaginal Discs / metabolism; Larva / genetics; Larva / growth & development; Larva / metabolism; Morphogenesis / genetics; Mutation; RNA, Small Interfering / genetics; Signal Transduction
TL;DR: The utility of the Genome Wide Association Study utilizing the natural genetic variation in leg proportionality found in the Drosophila Genetic Reference Panel fly lines is demonstrated, integrating the tools of quantitative and molecular genetics to study developmental processes, and new insights are provided into the pathways and networks involved in Drosophile leg development. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2013 journal article

Genome-wide association study of sleep in Drosophila melanogaster

BMC Genomics, 14.

By: S. Harbison, L. McCoy & T. Mackay

Source: NC State University Libraries
Added: August 6, 2018

2013 journal article

Gene selection and cancer type classification of diffuse large-B-cell lymphoma using a bivariate mixture model for two-species data

Hum Genomics, 7, 2.

By: Y. Su, D. Nielsen, L. Zhu, K. Richards, S. Suter, M. Breen, A. Motsinger-Reif, J. Osborne

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2013 journal article

Conservation and Sex-Specific Splicing of the transformer Gene in the Calliphorids Cochliomyia hominivorax, Cochliomyia macellaria and Lucilia sericata

PLoS ONE, 8(2), e56303.

By: F. Li n, S. Vensko n, E. Belikoff n & M. Scott n

Ed(s): G. Tear

MeSH headings : Animals; Base Sequence; Conserved Sequence / genetics; Diptera / genetics; Diptera / growth & development; Diptera / physiology; Female; Genes, Insect / genetics; Male; Molecular Sequence Data; Nucleotide Motifs / genetics; RNA Splicing / genetics; RNA, Messenger / genetics; RNA, Messenger / metabolism; Sex Characteristics
TL;DR: A model for sex specific regulation of tra splicing is proposed that incorporates the conserved features identified in this study and is proposed to facilitate the development of a “male-only” strain for genetic control programs. (via Semantic Scholar)
Sources: Web Of Science, Crossref, ORCID
Added: August 6, 2018

2013 journal article

Tumor fibroblast-derived epiregulin promotes growth of colitis-associated neoplasms through ERK

JOURNAL OF CLINICAL INVESTIGATION, 123(4), 1428–1443.

By: C. Neufert*, C. Becker, O. Tuereci, M. Waldner, I. Backert, K. Floh, I. Atreya, M. Leppkes ...

MeSH headings : Animals; Cell Line, Tumor; Cell Movement; Cell Proliferation; Colitis / chemically induced; Colitis / complications; Colon / pathology; Colorectal Neoplasms / etiology; Colorectal Neoplasms / pathology; Epidermal Growth Factor / genetics; Epidermal Growth Factor / metabolism; Epidermal Growth Factor / physiology; Epiregulin; Extracellular Signal-Regulated MAP Kinases / metabolism; Fibroblasts / metabolism; Fibroblasts / pathology; Fibroblasts / transplantation; Humans; Intestinal Mucosa / metabolism; Intestinal Mucosa / pathology; Ki-67 Antigen / metabolism; MAP Kinase Signaling System; Mice; Mice, Inbred C57BL; Mice, Knockout; Oligonucleotide Array Sequence Analysis; Transcriptome; Tumor Burden
TL;DR: The data indicate that EREG and tumor-associated fibroblasts play a crucial role in controlling tumor growth in colitis-associated neoplasms. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (Web of Science; OpenAlex)
Source: Web Of Science
Added: August 6, 2018

2013 journal article

Kinetic analysis of Arabidopsis glucosyltransferase UGT74B1 illustrates a general mechanism by which enzymes can escape product inhibition

BIOCHEMICAL JOURNAL, 450(1), 37–46.

By: J. Kopycki*, E. Wieduwild*, J. Kohlschmidt*, W. Brandt*, A. Stepanova n, J. Alonso n, M. Pedras*, S. Abel*, C. Grubb*

Contributors: J. Kopycki*, E. Wieduwild*, J. Kohlschmidt*, W. Brandt*, A. Stepanova n, J. Alonso n, M. Pedras*, S. Abel*, C. Grubb*

author keywords: glucosinolate; glycosyltransferase; ordered binding; product inhibition; UDP-glycosyltransferase (UGT)
MeSH headings : Arabidopsis / enzymology; Arabidopsis / genetics; Arabidopsis Proteins / chemistry; Arabidopsis Proteins / metabolism; Genome, Plant; Glucosyltransferases / chemistry; Glucosyltransferases / metabolism; Kinetics; Leucine / genetics; Leucine / metabolism; Models, Molecular; Mutation; Phenotype; Plants, Genetically Modified; Serine / genetics; Serine / metabolism; Substrate Specificity; Uridine Diphosphate Glucose / metabolism
TL;DR: It is found that mutation of the highly conserved Ser284 to leucine [wei9-1 (weak ethylene insensitive)] caused only very mild morphological and metabolic phenotypes, in dramatic contrast with knockout mutants, indicating that steady state glucosinolate levels are actively regulated even in unchallenged plants. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

2013 journal article

Improving K-12 pedagogy via a Cloud designed for education

INTERNATIONAL JOURNAL OF INFORMATION MANAGEMENT, 33(1), 235–241.

By: S. Stein n, J. Ware n, J. Laboy n & H. Schaffer n

author keywords: Cloud computing; Virtual Computing Lab; K-12 education; Mathematics; Geometry; Algebra; Software; Visualization
TL;DR: Observations from a case study in North Carolina rural high schools using an educational Cloud called the Virtual Computing Lab to access dynamic geometry and algebra software are used. (via Semantic Scholar)
UN Sustainable Development Goal Categories
4. Quality Education (OpenAlex)
Source: Web Of Science
Added: August 6, 2018

2013 journal article

Conditional Inactivation of TNF alpha-Converting Enzyme in Chondrocytes Results in an Elongated Growth Plate and Shorter Long Bones

PLOS ONE, 8(1).

By: K. Saito*, K. Horiuchi*, T. Kimura*, S. Mizuno*, M. Yoda*, H. Morioka*, H. Akiyama*, D. Threadgill n ...

MeSH headings : ADAM Proteins / genetics; ADAM Proteins / metabolism; ADAM17 Protein; Animals; Bone Development / genetics; Cell Differentiation; Chondrocytes / metabolism; Chondrocytes / physiology; Collagen Type II / genetics; Embryonic Development / genetics; ErbB Receptors / genetics; ErbB Receptors / metabolism; Gene Expression Regulation, Developmental; Growth Plate / growth & development; Growth Plate / metabolism; Male; Matrix Metalloproteinase 13 / metabolism; Mice; Mutation; Osteoprotegerin / metabolism; RANK Ligand / metabolism; Signal Transduction; Tumor Necrosis Factor-alpha / metabolism
TL;DR: Data suggest that TACE-EGFR signaling in chondrocytes is involved in the turnover of the growth plate during postnatal development via the transcriptional regulation of osteoprotegerin, Rankl, and Mmp-13. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2013 journal article

Early Weaning Stress in Pigs Impairs Innate Mucosal Immune Responses to Enterotoxigenic E. coli Challenge and Exacerbates Intestinal Injury and Clinical Disease

PLOS ONE, 8(4).

By: B. McLamb n, A. Gibson n, E. Overman n, C. Stahl n & A. Moeser n

MeSH headings : Animals; Animals, Newborn; Cytokines / immunology; Cytokines / metabolism; Dextrans / metabolism; Enterotoxigenic Escherichia coli / immunology; Enterotoxigenic Escherichia coli / pathogenicity; Escherichia coli Infections / veterinary; Ileum / immunology; Ileum / metabolism; Ileum / microbiology; Ileum / pathology; Immunity, Innate; Immunity, Mucosal; Inflammation Mediators / immunology; Inflammation Mediators / metabolism; Intestinal Mucosa / immunology; Intestinal Mucosa / microbiology; Intestinal Mucosa / pathology; Mast Cells / immunology; Mast Cells / pathology; Neutrophils / immunology; Neutrophils / pathology; Permeability; Stress, Physiological / immunology; Swine; Swine Diseases / immunology; Weaning
TL;DR: The early weaning stress can profoundly alter subsequent immune and physiology responses and clinical outcomes to subsequent infectious pathogen challenge, as demonstrated in pigs weaned from their dam. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Source: Web Of Science
Added: August 6, 2018

2013 journal article

Plant regeneration and genetic transformation of C. canadensis: A non-model plant appropriate for investigation of flower development in Cornus (Cornaceae)

Plant Cell Reports, 32(1), 77–87.

By: X. Liu n, C. Feng n, R. Franks n, R. Qu n, D. Xie n & Q. Xiang n

Contributors: X. Liu n, C. Feng n, R. Franks n, R. Qu n, D. Xie n & Q. Xiang n

MeSH headings : Cornus / drug effects; Cornus / genetics; Cornus / growth & development; Flowers / drug effects; Flowers / genetics; Flowers / growth & development; Fluorescence; Gene Expression Regulation, Plant; Green Fluorescent Proteins / metabolism; Hygromycin B / pharmacology; Inflorescence / drug effects; Inflorescence / growth & development; Microscopy, Confocal; Models, Biological; Plant Shoots / drug effects; Plant Shoots / growth & development; Regeneration / drug effects; Reverse Transcriptase Polymerase Chain Reaction; Soil; Transformation, Genetic / drug effects
TL;DR: An effective protocol of plant regeneration and genetic transformation of C. canadensis via Agrobacterium strain EHA105-mediated transformation is reported, providing an appropriate platform to investigate the molecular mechanisms by which the various inflorescence forms are developed in Cornus plants. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (Web of Science; OpenAlex)
Sources: NC State University Libraries, ORCID, NC State University Libraries
Added: August 6, 2018

2013 journal article

An eigenvector interlacing property of graphs that arise from trees by Schur complementation of the Laplacian

LINEAR ALGEBRA AND ITS APPLICATIONS, 438(3), 1078–1094.

By: A. Griffing n, B. Lynch n & E. Stone n

author keywords: Trees; Schur complement; Eigenvectors; Harmonic functions; Partially-supplied graph; Nodal domains; Interlacing
TL;DR: This paper specialize to where G is a tree with points of articulation r ∈ R and considers the partially-supplied graph G* derived from G by taking the Schur complement with respect to R in L. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2013 journal article

Inferences of Demography and Selection in an African Population of Drosophila melanogaster

GENETICS, 193(1), 215–228.

MeSH headings : Adaptation, Physiological; Africa; Animals; Demography; Drosophila melanogaster / genetics; Genetics, Population; Genome; High-Throughput Nucleotide Sequencing; Models, Genetic; Polymorphism, Genetic; Selection, Genetic
TL;DR: Demographic modeling of this ancestral population of Drosophila melanogaster reveals a strong signature of a population bottleneck followed by population expansion, which has significant implications for future demographic modeling of derived populations of this species. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

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