Works Published in 2015

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Displaying works 41 - 56 of 56 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2015 journal article

The 28th International Mammalian Genome Conference-meeting report

Mammalian Genome, 26(5-6), 201–209.

By: W. Barrington, A. Morgan & L. Siracusa

Source: NC State University Libraries
Added: August 6, 2018

2015 journal article

SIGNR3-dependent immune regulation by Lactobacillus acidophilus surface layer protein A in colitis

EMBO JOURNAL, 34(7), 881–895.

By: Y. Lightfoot*, K. Selle n, T. Yang*, Y. Goh n, B. Sahay*, M. Zadeh*, J. Owen*, N. Colliou* ...

author keywords: colitis; immune regulation; Lactobacillus acidophilus; SIGNR3; surface layer protein A
MeSH headings : Animals; Antigens, CD / genetics; Antigens, CD / immunology; Bacterial Proteins / genetics; Bacterial Proteins / immunology; Inflammatory Bowel Diseases / genetics; Inflammatory Bowel Diseases / immunology; Inflammatory Bowel Diseases / microbiology; Inflammatory Bowel Diseases / pathology; Intestinal Mucosa / immunology; Intestinal Mucosa / pathology; Lactobacillus acidophilus / genetics; Lactobacillus acidophilus / immunology; Lectins, C-Type / genetics; Lectins, C-Type / immunology; Lipopolysaccharides / genetics; Lipopolysaccharides / immunology; Mice; Mice, Knockout; Protein Binding / genetics; Protein Binding / immunology; Teichoic Acids / genetics; Teichoic Acids / immunology
TL;DR: This work presents critical insights into SlpA/SIGNR3‐induced responses that are integral to the potential development of novel biological therapies for autoinflammatory diseases, including IBD. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2015 journal article

Roles of Solvent Accessibility and Gene Expression in Modeling Protein Sequence Evolution

EVOLUTIONARY BIOINFORMATICS, 11.

author keywords: protein evolution; protein structure; gene expression; codon usage; scaled selection coefficient; solvent accessibility
TL;DR: It is come to the biologically plausible conclusion that both RSA and gene expression are related to amino acid frequencies, but, among synonymous codons, the relative probability of a particular codon is more closely related to gene expression than RSA. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2015 journal article

Regulator of bulb biogenesis1 (RBB1) is involved in vacuole bulb formation in arabidopsis

PLoS One, 10(4).

TL;DR: It is proposed that the bulbs may function transiently to accommodate membranes and proteins when transvacuolar strands fail to elongate, and it is shown that RBB1 corresponds to a very large protein of unknown function that is specific to plants, is present in the cytosol, and may associate with cellular membranes. (via Semantic Scholar)
Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2015 journal article

Genetic Architecture of Micro-Environmental Plasticity in Drosophila melanogaster

SCIENTIFIC REPORTS, 5.

MeSH headings : Acclimatization / genetics; Animals; Cell Plasticity / genetics; Drosophila Proteins / genetics; Drosophila melanogaster / genetics; Ecosystem; Gene-Environment Interaction; Genetic Fitness / genetics; Quantitative Trait Loci / genetics
TL;DR: This work quantified genetic variation for micro-environmental plasticity for three quantitative traits in the inbred, sequenced lines of the Drosophila melanogaster Genetic Reference Panel and identified several candidate genes associated with micro-Environmental plasticity of startle response, including Drosophile Hsp90. (via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action (Web of Science)
15. Life on Land (Web of Science; OpenAlex)
Source: Web Of Science
Added: August 6, 2018

2015 journal article

Auxin Influx Carriers Control Vascular Patterning and Xylem Differentiation in Arabidopsis thaliana

PLOS GENETICS, 11(4).

MeSH headings : Arabidopsis / genetics; Arabidopsis / growth & development; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Cell Differentiation / genetics; Gene Expression Regulation, Plant; Indoleacetic Acids; Membrane Transport Proteins / genetics; Membrane Transport Proteins / metabolism; Plant Development / genetics; Plant Shoots / genetics; Plant Shoots / growth & development; Xylem / genetics; Xylem / growth & development
TL;DR: The theoretical analysis predicts that influx carriers facilitate periodic patterning and modulate the periodicity of auxin maxima and computational simulations propose a role for extracellular auxin as an inhibitor of xylem differentiation. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2015 journal article

The 100-genomes strains, an S. cerevisiae resource that illuminates its natural phenotypic and genotypic variation and emergence as an opportunistic pathogen

GENOME RESEARCH, 25(5), 762–774.

By: P. Strope*, D. Skelly*, S. Kozmin*, G. Mahadevan*, E. Stone n, P. Magwene*, F. Dietrich*, J. McCusker*

MeSH headings : Contig Mapping / methods; Genome, Fungal; Genotype; Phenotype; Phylogeny; Polymorphism, Genetic; Saccharomyces cerevisiae / classification; Saccharomyces cerevisiae / genetics; Saccharomyces cerevisiae / pathogenicity; Sequence Alignment / methods; Virulence / genetics
TL;DR: The 100-genomes strains are a novel, multipurpose resource to advance the study of S. cerevisiae population genetics, quantitative genetics, and the emergence of an opportunistic pathogen. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2015 journal article

Tetracycline-exposed Drosophila melanogaster males produce fewer offspring but a relative excess of sons

ECOLOGY AND EVOLUTION, 5(15), 3130–3139.

By: . Kaitlyn L. O'Shea & N. Singh n

author keywords: Drosophila; fitness; sex ratio; tetracycline; Wolbachia
TL;DR: The results indicate that tetracycline-treated males produce a relative excess of sons and the number of progeny produced by treated males but not treated females, and implicate the antibiotic itself as mediating these changes. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2015 article

Molecular basis of fruit development

Liu, Z., & Franks, R. G. (2015, February 5). FRONTIERS IN PLANT SCIENCE, Vol. 6.

By: Z. Liu* & R. Franks n

Contributors: Z. Liu* & R. Franks n

author keywords: fruit evolution; endocarp; auxin; cytokinin; morphogenesis; ovule; gynoecium; carpel margin meristem
TL;DR: The 11 articles within this special research topic focus on the molecular mechanisms of early fruit development and span a diversity of species and experimental approaches. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science; OpenAlex)
13. Climate Action (Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2015 journal article

Functional characterization of calliphorid cell death genes and cellularization gene promoters for controlling gene expression and cell viability in early embryos

INSECT MOLECULAR BIOLOGY, 24(1), 58–70.

By: R. Edman n, R. Linger n, E. Belikoff n, F. Li n, S. Sze*, A. Tarone*, M. Scott n

author keywords: genetic sexing; transgenic; cellularization gene; sterile insect technique
MeSH headings : Amino Acid Sequence; Animals; Animals, Genetically Modified; Base Sequence; Cell Death / genetics; Cell Survival; Diptera / embryology; Diptera / genetics; Diptera / growth & development; Drosophila melanogaster / genetics; Drosophila melanogaster / growth & development; Embryo, Nonmammalian; Female; Gene Expression Regulation; Genes, Insect; Genes, Lethal; Male; Molecular Sequence Data; Pest Control, Biological / methods; Promoter Regions, Genetic; Sex Ratio
TL;DR: The isolated gene promoters and pro‐apoptotic genes could potentially be used to build transgenic embryonic sexing strains of calliphorid livestock pests. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, ORCID
Added: August 6, 2018

2015 journal article

The ABCs of Eye Color in Tribolium castaneum: Orthologs of the Drosophila white, scarlet, and brown Genes

GENETICS, 199(3), 749-+.

By: N. Grubbs n, S. Haas*, R. Beeman* & M. Lorenzen n

author keywords: ABC transporters; eye pigmentation; evolution of development
MeSH headings : ATP-Binding Cassette Transporters / genetics; Animals; Base Sequence; Drosophila Proteins / genetics; Evolution, Molecular; Eye Color / genetics; Eye Proteins / genetics; Genes, Insect; Molecular Sequence Data; Mutation; Tribolium / genetics
TL;DR: RNA inhibition of Tcw and Tcst recapitulates the mutant phenotypes, confirming the roles of these genes in normal eye pigmentation, while RNA interference of Tcbw provides further evidence that it has no role in eye pigmented in Tribolium. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2015 journal article

Sensitivity to hepatotoxicity due to epigallocatechin gallate is affected by genetic background in diversity outbred mice

FOOD AND CHEMICAL TOXICOLOGY, 76, 19–26.

By: R. Church*, D. Gatti*, T. Urban*, N. Long*, . Yang*, Q. Shi*, J. Eaddy*, M. Mosedale* ...

author keywords: Green tea; Epigallocatechin gallate; Hepatotoxicity; Population variability; Herbal; Diversity outbred
MeSH headings : Animals; Antioxidants / administration & dosage; Antioxidants / adverse effects; Catechin / administration & dosage; Catechin / adverse effects; Catechin / analogs & derivatives; Chemical and Drug Induced Liver Injury / genetics; Chromosome Mapping; Dose-Response Relationship, Drug; Genotyping Techniques; In Situ Nick-End Labeling; Liver / drug effects; Liver / metabolism; Male; Mice / genetics; Phenotype; Polymorphism, Single Nucleotide; Polyphenols / administration & dosage; Polyphenols / adverse effects; Quantitative Trait Loci; Tea / chemistry
TL;DR: The data indicate that the Diversity Outbred mice may provide a platform for informing risk of rare, adverse reactions that may occur in consumer populations upon ingestion of concentrated herbal products. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (Web of Science; OpenAlex)
Source: Web Of Science
Added: August 6, 2018

2015 journal article

Evolutionary tipping points in the capacity to adapt to environmental change

Proceedings of the National Academy of Sciences of the United States of America, 112(1), 184–189.

By: C. Botero, F. Weissing, J. Wright & D. Rubenstein

Source: NC State University Libraries
Added: August 6, 2018

2015 journal article

Enhancement of single particle rare earth doped NaYF4: Yb, Er emission with a gold shell

Nanotechnology, 26(2).

By: L. Li, K. Green, H. Hallen & S. Lim

Source: NC State University Libraries
Added: August 6, 2018

2015 journal article

X-to-autosome expression and msl-2 transcript abundance correlate among Drosophila melanogaster somatic tissues

PEERJ, 3.

By: S. Vensko n & E. Stone n

author keywords: H4K16Ac; Male-Specific Lethal complex; Drosophila melanogaster; Dosage compensation complex; Dosage compensation
TL;DR: It is hypothesize the degree, up to but not exceeding 2-fold, to which the MSL complex upregulates male X-linked genes varies quantitatively by tissue type, and finds X-to-autosome expression correlates with the tissue-specific expression of msl-2 which encodes an essential male-specific component of theMSL complex. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2015 journal article

A recombineering-based gene tagging system for Arabidopsis

Methods in Molecular Biology (Clifton, N.J.), 1227, 233–243.

Contributors: J. Alonso n & A. Stepanova n

author keywords: Recombineering; Arabidopsis; Fluorescent protein; Lambda RED
MeSH headings : Arabidopsis / genetics; Arabidopsis / metabolism; Bacteriophage lambda / genetics; Bacteriophage lambda / metabolism; Chromosomes, Artificial, Bacterial / chemistry; Chromosomes, Artificial, Bacterial / metabolism; Cloning, Molecular; Electroporation; Escherichia coli / genetics; Escherichia coli / metabolism; Genetic Engineering / methods; Genetic Vectors / chemistry; Genetic Vectors / metabolism; Homologous Recombination; Mutagenesis
TL;DR: In this chapter, the experimental procedures involved in recombineering-based tagging of an Arabidopsis gene contained in a plant transformation-ready bacterial artificial chromosome (TAC) are described. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: ORCID, NC State University Libraries
Added: August 6, 2018

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