Works Published in 2012

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Displaying works 1 - 20 of 58 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2012 journal article

Epistasis dominates the genetic architecture of Drosophila quantitative traits

Proceedings of the National Academy of Sciences, 109(39), 15553–15559.

By: W. Huang, S. Richards*, M. Carbone*, D. Zhu*, R. Anholt n, J. Ayroles, L. Duncan, K. Jordan ...

co-author countries: United States of America 🇺🇸
author keywords: chill coma recovery; genetic interaction networks; genome-wide association studies; startle response; starvation resistance
MeSH headings : Animals; Drosophila melanogaster; Epistasis, Genetic / physiology; Genes, Insect / physiology; Polymorphism, Single Nucleotide; Quantitative Trait, Heritable
Source: Crossref
Added: August 28, 2020

2012 journal article

The Drosophila melanogaster Genetic Reference Panel

Nature, 482(7384), 173–178.

By: T. Mackay n, S. Richards*, E. Stone n, A. Barbadilla*, J. Ayroles n, D. Zhu*, S. Casillas*, Y. Han* ...

co-author countries: Spain 🇪🇸 United Kingdom of Great Britain and Northern Ireland 🇬🇧 United States of America 🇺🇸
MeSH headings : Alleles; Animals; Centromere / genetics; Chromosomes, Insect / genetics; Drosophila melanogaster / genetics; Genome-Wide Association Study; Genomics; Genotype; Phenotype; Polymorphism, Single Nucleotide / genetics; Quantitative Trait Loci / genetics; Selection, Genetic / genetics; Starvation / genetics; Telomere / genetics; X Chromosome / genetics
Source: Crossref
Added: August 28, 2020

2012 journal article

The interface of protein structure, protein biophysics, and molecular evolution

Protein Science, 21(6), 769–785.

By: D. Liberles*, S. Teichmann*, I. Bahar*, U. Bastolla*, J. Bloom*, E. Bornberg-Bauer*, L. Colwell*, A. de Koning* ...

co-author countries: Argentina 🇦🇷 Canada 🇨🇦 Germany 🇩🇪 Spain 🇪🇸 United Kingdom of Great Britain and Northern Ireland 🇬🇧 Israel 🇮🇱 Sweden 🇸🇪 United States of America 🇺🇸
author keywords: evolutionary modeling; domain evolution; sequence-structure-function relationships; protein dynamics; protein thermodynamics; gene duplication; protein expression; ancestral sequence reconstruction
MeSH headings : Amino Acid Sequence; Animals; Evolution, Molecular; Humans; Models, Molecular; Molecular Sequence Data; Protein Conformation; Protein Folding; Proteins / chemistry; Proteins / genetics; RNA, Messenger / genetics; Sequence Alignment
Source: Crossref
Added: August 28, 2020

2012 journal article

AUX/LAX genes encode a family of auxin influx transporters that perform distinct functions during Arabidopsis development

The Plant Cell Online, 24(7), 2874–2885.

By: B. Péret*, K. Swarup*, A. Ferguson*, M. Seth*, Y. Yang*, S. Dhondt*, N. James*, I. Casimiro*, P. Perry*, A. Syed*

co-author countries: Belgium 🇧🇪 Spain 🇪🇸 France 🇫🇷 United Kingdom of Great Britain and Northern Ireland 🇬🇧 United States of America 🇺🇸

Contributors: B. Péret*, K. Swarup*, A. Ferguson*, M. Seth*, Y. Yang*, S. Dhondt*, N. James*, I. Casimiro*, P. Perry*, A. Syed*

MeSH headings : Arabidopsis / cytology; Arabidopsis / genetics; Arabidopsis / growth & development; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Biological Transport; Body Patterning; Cotyledon / cytology; Cotyledon / genetics; Cotyledon / growth & development; Cotyledon / metabolism; Gene Knockout Techniques; Indoleacetic Acids / metabolism; Membrane Transport Proteins / genetics; Membrane Transport Proteins / metabolism; Multigene Family; Mutagenesis, Insertional; Phenotype; Plant Roots / cytology; Plant Roots / genetics; Plant Roots / growth & development; Plant Roots / metabolism; Plant Vascular Bundle / cytology; Plant Vascular Bundle / genetics; Plant Vascular Bundle / growth & development; Plant Vascular Bundle / metabolism; Plants, Genetically Modified; Seedlings / cytology; Seedlings / genetics; Seedlings / growth & development; Seedlings / metabolism
Source: ORCID
Added: December 19, 2019

2012 journal article

Differential effects of poly(ADP-ribose) polymerase inhibition on DNA break repair in human cells are revealed with Epstein-Barr virus

Proceedings of the National Academy of Sciences, 109(17), 6590–6595.

By: W. Ma*, C. Halweg*, D. Menendez* & M. Resnick*

co-author countries: United States of America 🇺🇸
author keywords: base excision repair; BRCA
MeSH headings : Blotting, Western; Cell Cycle; DNA Damage; DNA Repair; Enzyme Inhibitors / pharmacology; Herpesvirus 4, Human / physiology; Humans; Infrared Rays; Plasmids / physiology; Poly(ADP-ribose) Polymerase Inhibitors; Polymerase Chain Reaction; Tumor Suppressor Protein p53 / physiology
Sources: Crossref, ORCID
Added: September 28, 2019

2012 chapter

Composite Interval Mapping and Multiple Interval Mapping: Procedures and Guidelines for Using Windows QTL Cartographer

In Methods in Molecular Biology (pp. 75–119).

By: L. Silva n, S. Wang n & Z. Zeng n

co-author countries: United States of America 🇺🇸
MeSH headings : Animals; Drosophila melanogaster / genetics; Inbreeding; Models, Statistical; Quantitative Trait Loci / genetics; Software
Source: Crossref
Added: July 20, 2019

2012 journal article

Metabolomics Reveals Amino Acids Contribute to Variation in Response to Simvastatin Treatment

PLoS ONE, 7(7), e38386.

co-author countries: United States of America 🇺🇸

Ed(s): M. Oresic

MeSH headings : Adult; Amino Acids, Essential / blood; Biomarkers, Pharmacological / blood; Cholesterol, LDL / blood; Citrulline / blood; Cystine / blood; Female; Fructose / blood; Gas Chromatography-Mass Spectrometry; Humans; Hydroxymethylglutaryl-CoA Reductase Inhibitors / pharmacology; Hydroxymethylglutaryl-CoA Reductase Inhibitors / therapeutic use; Lauric Acids / blood; Male; Metabolomics; Nitric Oxide Synthase / blood; Ornithine / blood; Simvastatin / pharmacology; Simvastatin / therapeutic use; Stearic Acids / blood; Succinic Acid / blood; Xanthine / blood; alpha-Tocopherol / blood
Source: Crossref
Added: July 20, 2019

2012 journal article

Evolution of bract development and B-class MADS box gene expression in petaloid bracts of cornus s. l. (cornaceae)

New Phytologist, 196(2), 631–643.

co-author countries: United States of America 🇺🇸

Contributors: C. Feng n, X. Liu n, Y. Yu n, D. Xie n, R. Franks n & Q. Xiang n

author keywords: APETALA3; B-class gene expression; Cornus; development; Evo-Devo; evolution of petaloid bracts; heterotopic petaloidy; PISTILLATA
MeSH headings : Biological Evolution; Cell Shape; Cornaceae / anatomy & histology; Cornaceae / genetics; Cornaceae / growth & development; Cornaceae / ultrastructure; Flowers / cytology; Flowers / genetics; Flowers / growth & development; Flowers / ultrastructure; Gene Expression Regulation, Developmental; Gene Expression Regulation, Plant; Genes, Plant / genetics; Inflorescence / growth & development; MADS Domain Proteins / genetics; MADS Domain Proteins / metabolism; Phylogeny; Plant Epidermis / cytology; Plant Epidermis / ultrastructure; Plant Leaves / cytology; Plant Leaves / genetics; Plant Leaves / growth & development; Plant Leaves / ultrastructure; Plant Proteins / genetics; Plant Proteins / metabolism; Seasons; Time Factors
Source: ORCID
Added: January 22, 2019

2012 journal article

Photoreceptor Differentiation following Transplantation of Allogeneic Retinal Progenitor Cells to the Dystrophic Rhodopsin Pro347Leu Transgenic Pig

STEM CELLS INTERNATIONAL, 2012.

By: H. Klassen*, J. Kiilgaard*, K. Warfvinge*, M. Samuel*, R. Prather*, F. Wong*, R. Petters n, M. Cour*, M. Young*

co-author countries: Denmark 🇩🇰 Sweden 🇸🇪 United States of America 🇺🇸
Source: Web Of Science
Added: August 6, 2018

2012 journal article

Multiple trait multiple interval mapping of quantitative trait loci from inbred line crosses

BMC Genetics, 13.

By: L. Silva, S. Wang & Z. Zeng

Source: NC State University Libraries
Added: August 6, 2018

2012 journal article

Influence of Exposure Time on Gene Expression by Human Intestinal Epithelial Cells Exposed to Lactobacillus acidophilus

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 78(14), 5028–5032.

co-author countries: United States of America 🇺🇸
MeSH headings : Caco-2 Cells; Epithelial Cells / immunology; Epithelial Cells / metabolism; Epithelial Cells / microbiology; Flagellin / metabolism; Flagellin / pharmacology; Gene Expression Profiling; Gene Expression Regulation; Humans; Intestinal Mucosa / metabolism; Intestines / cytology; Intestines / immunology; Intestines / microbiology; Lactobacillus acidophilus / immunology; Molecular Sequence Data; NF-kappa B / genetics; NF-kappa B / metabolism; Probiotics / pharmacology; Recombinant Proteins / metabolism; Recombinant Proteins / pharmacology; Time Factors
Source: Web Of Science
Added: August 6, 2018

2012 journal article

Construction and Immunological Evaluation of Dual Cell Surface Display of HIV-1 Gag and Salmonella enterica Serovar Typhimurium FliC in Lactobacillus acidophilus for Vaccine Delivery

CLINICAL AND VACCINE IMMUNOLOGY, 19(9), 1374–1381.

By: A. Kajikawa*, L. Zhang*, J. Long n, S. Nordone n, L. Stoeker n, A. LaVoy*, S. Bumgardner n, T. Klaenhammer n, G. Dean*

co-author countries: United States of America 🇺🇸
MeSH headings : AIDS Vaccines / administration & dosage; AIDS Vaccines / genetics; AIDS Vaccines / immunology; Administration, Oral; Animals; Bacterial Vaccines / administration & dosage; Bacterial Vaccines / genetics; Bacterial Vaccines / immunology; Cell Surface Display Techniques / methods; Cells, Cultured; Dendritic Cells / immunology; Female; Flagellin / genetics; Flagellin / immunology; HIV-1 / genetics; HIV-1 / immunology; Humans; Intestinal Mucosa / immunology; Lactobacillus acidophilus / genetics; Leukocytes, Mononuclear / immunology; Mice; Mice, Inbred BALB C; Salmonella typhimurium / genetics; Salmonella typhimurium / immunology; Vaccines, Synthetic / administration & dosage; Vaccines, Synthetic / genetics; Vaccines, Synthetic / immunology; gag Gene Products, Human Immunodeficiency Virus / genetics; gag Gene Products, Human Immunodeficiency Virus / immunology
Source: Web Of Science
Added: August 6, 2018

2012 journal article

Characterization of the fecal microbiota using high-throughput sequencing reveals a stable microbial community during storage

PLoS One, 7(10).

By: I. Carroll*, T. Ringel-Kulka*, J. Siddle*, T. Klaenhammer n & Y. Ringel*

co-author countries: United States of America 🇺🇸
MeSH headings : Bacteria / classification; Bacteria / genetics; Bacteria / growth & development; Biodiversity; DNA, Bacterial / chemistry; DNA, Bacterial / genetics; Feces / microbiology; Freezing; Genetic Variation; Humans; Intestines / microbiology; Irritable Bowel Syndrome / microbiology; Metagenome / genetics; RNA, Ribosomal, 16S / genetics; Sequence Analysis, DNA / methods; Specimen Handling / methods; Time Factors
Source: NC State University Libraries
Added: August 6, 2018

2012 journal article

AUX/LAX genes encode a family of auxin influx transporters that perform distinct functions during arabidopsis development

Plant Cell, 24(7), 2874–2885.

By: B. Peret, K. Swarup, A. Ferguson, M. Seth, Y. Yang, S. Dhondt, N. James, I. Casimiro ...

Source: NC State University Libraries
Added: August 6, 2018

2012 journal article

The impact of probiotics and prebiotics on the immune system

NATURE REVIEWS IMMUNOLOGY, 12(10), 728–734.

By: T. Klaenhammer*, M. Kleerebezem, M. Kopp & M. Rescigno

MeSH headings : Animals; Humans; Immune System; Immunomodulation; Prebiotics; Probiotics
Source: Web Of Science
Added: August 6, 2018

2012 journal article

Impact of Genetic Architecture on the Relative Rates of X versus Autosomal Adaptive Substitution

MOLECULAR BIOLOGY AND EVOLUTION, 29(8), 1933–1942.

co-author countries: United States of America 🇺🇸
author keywords: dominance; epistasis; genetics of adaptation; soft sweeps; molecular evolution
MeSH headings : Adaptation, Physiological / genetics; Animals; Chromosomes, Human, X / genetics; Evolution, Molecular; Genes / genetics; Humans; Models, Genetic; Mutation / genetics; Phylogeny; Population Density; X Chromosome / genetics
Source: Web Of Science
Added: August 6, 2018

2012 journal article

Fitting nonstationary general-time-reversible models to obtain edge-lengths and frequencies for the barry-hartigan model

Systematic Biology, 61(6), 927–940.

By: L. Zou, E. Susko, C. Field & A. Roger

Source: NC State University Libraries
Added: August 6, 2018

2012 journal article

Efficacy of EGFR Inhibition Is Modulated by Model, Sex, Genetic Background and Diet: Implications for Preclinical Cancer Prevention and Therapy Trials

PLOS ONE, 7(6).

By: E. Rinella* & D. Threadgill n

co-author countries: United States of America 🇺🇸
MeSH headings : Animals; Antineoplastic Agents / pharmacology; Antineoplastic Agents / therapeutic use; Azoxymethane / toxicity; Colorectal Neoplasms / chemically induced; Colorectal Neoplasms / drug therapy; Colorectal Neoplasms / genetics; Diet; Disease Models, Animal; ErbB Receptors / antagonists & inhibitors; ErbB Receptors / metabolism; Female; Male; Mice; Mice, Inbred C57BL; Phosphorylation; Quinazolines / pharmacology; Quinazolines / therapeutic use; Sex Factors; Tyrphostins / pharmacology; Tyrphostins / therapeutic use
Source: Web Of Science
Added: August 6, 2018

2012 journal article

Developmental plasticity and the evolution of parasitism in an unusual nematode, Parastrongyloides trichosuri

EvoDevo, 3(1).

By: S. Stasiuk*, M. Scott n & W. Grant*

co-author countries: Australia 🇦🇺 Canada 🇨🇦 New Zealand 🇳🇿 United States of America 🇺🇸
Sources: Web Of Science, Crossref, ORCID
Added: August 6, 2018

2012 journal article

Age-specific variation in immune response in drosophila melanogaster has a genetic basis

Genetics, 191(3), 989–584.

By: T. Felix, K. Hughes, E. Stone, J. Drnevich & J. Leips

Source: NC State University Libraries
Added: August 6, 2018

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