Molecular Education, Technology and Research Innovation Center

Works Published in 2011

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Displaying works 1 - 20 of 33 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2011 conference paper

A Microfluidic-Ion Mobility-Mass Spectrometry Platform for Presymptomatic Diagnoses of CBW Agent Exposure

Presented at the 2011 Chemical and Biological Defense Science and Technology Conference, Las Vegas, NV.

By: J. Enders, C. Marasco, C. Goodwin, J. May, K. Seale, J. Wikswo, J. McLean

Event: 2011 Chemical and Biological Defense Science and Technology Conference at Las Vegas, NV

Source: NC State University Libraries
Added: March 12, 2022

2011 conference paper

Development of a Platform for Online Acquisition of Empirical Systems Biology Data

Presented at the 5th Annual Conference on Cellular Information Processing (q-bio), Santa Fe, NM.

By: J. Enders, C. Marasco, C. Goodwin, J. May, K. Seale, J. Wikswo, J. McLean

Event: 5th Annual Conference on Cellular Information Processing (q-bio) at Santa Fe, NM on August 10-14, 2011

Source: NC State University Libraries
Added: March 12, 2022

2011 conference paper

Microfluidic-Coupled Ion Mobility-Mass Spectrometry Platform for Real-Time, Temporally-Resolved Analysis of Excreted Cellular Materials

Presented at the 59th American Society for Mass Spectrometry Annual Conference, Denver, CO.

By: J. Enders, C. Marasco, C. Goodwin, J. May, K. Seale, J. Wikswo, J. McLean

Event: 59th American Society for Mass Spectrometry Annual Conference at Denver, CO

Source: NC State University Libraries
Added: March 12, 2022

2011 conference paper

Behavioral Response Profiles of Odorant Binding Proteins in Drosophila melanogaster

Presented at the 6th Annual North Carolina State University Graduate Student Research Symposium, Raleigh, NC.

By: S. Swarup, T. Williams & R. Anholt

Event: 6th Annual North Carolina State University Graduate Student Research Symposium at Raleigh, NC

Source: NC State University Libraries
Added: March 6, 2022

2011 conference paper

Pseudo-SRM Conditions Improve Detection of N 2,3-ethenoguanine in DNA

Mutlu, E., Collins, L., Stout, M., Upton, P., Daye, L., Winsett, D., … Swenberg, J. (2011, June). Poster presented at the 59th American Society for Mass Spectrometry Conference, Denver, CO.

By: E. Mutlu, L. Collins, M. Stout, P. Upton, L. Daye, D. Winsett, G. Hatch, P. Evansky, J. Swenberg

Event: 59th American Society for Mass Spectrometry Conference at Denver, CO on June 5-9, 2011

Source: NC State University Libraries
Added: September 9, 2021

2011 journal article

Tet Proteins Can Convert 5-Methylcytosine to 5-Formylcytosine and 5-Carboxylcytosine

Science, 333(6047), 1300–1303.

By: S. Ito*, L. Shen*, Q. Dai*, S. Wu*, L. Collins*, J. Swenberg*, C. He*, Y. Zhang*

co-author countries: United States of America 🇺🇸
MeSH headings : 5-Methylcytosine / metabolism; Animals; Cell Line; Cytosine / analogs & derivatives; Cytosine / metabolism; DNA / metabolism; DNA Methylation; DNA-Binding Proteins / genetics; DNA-Binding Proteins / metabolism; Dioxygenases; Embryonic Stem Cells / metabolism; Humans; Mice; Oxidation-Reduction; Proto-Oncogene Proteins / genetics; Proto-Oncogene Proteins / metabolism; Recombinant Fusion Proteins / metabolism
Sources: Crossref, ORCID
Added: September 5, 2021

2011 journal article

Debio 0507 primarily forms diaminocyclohexane-Pt-d(GpG) and -d(ApG) DNA adducts in HCT116 cells

Cancer Chemotherapy and Pharmacology, 69(3), 665–677.

By: C. King*, S. Ramachandran*, S. Chaney*, L. Collins*, J. Swenberg*, K. deKrafft*, W. Lin*, L. Cicurel*, M. Barbier*

co-author countries: Switzerland 🇨🇭 United States of America 🇺🇸
author keywords: Debio 0507; Oxaliplatin; DNA adducts; LC/MS; UPLC/MS/MS
MeSH headings : Antineoplastic Agents / chemistry; Antineoplastic Agents / metabolism; Antineoplastic Agents / pharmacology; Cell Culture Techniques; Chromatography, High Pressure Liquid; DNA Adducts / chemistry; DNA Adducts / metabolism; Deoxyadenine Nucleotides / chemistry; Deoxyadenine Nucleotides / metabolism; Deoxyguanosine / chemistry; Deoxyguanosine / metabolism; Dinucleoside Phosphates / chemistry; Dinucleoside Phosphates / metabolism; HCT116 Cells; Humans; Organoplatinum Compounds / chemistry; Organoplatinum Compounds / metabolism; Organoplatinum Compounds / pharmacology; Oxaliplatin; Tandem Mass Spectrometry
Sources: Crossref, ORCID
Added: September 5, 2021

2011 conference paper

Proteomics of Olfaction: Identification and Relative Quantification of Odorant Binding Proteins in the Antennae of Drosophila melanogaster

Presented at the American Society for Mass Spectrometry, Denver, CO.

By: T. Williams, S. Swarup, S. Zhou & R. Anholt

Event: American Society for Mass Spectrometry at Denver, CO

Source: NC State University Libraries
Added: August 13, 2021

2011 conference paper

Functional Dissection of Odorant Binding Protein Genes in Drosophila melanogaster

Presented at the Center for Integrative Genomics (CIG) Symposium, Université de Lausanne, Lausanne, Switzerland.

By: S. Swarup, T. Williams & R. Anholt

Event: Center for Integrative Genomics (CIG) Symposium at Université de Lausanne, Lausanne, Switzerland

Source: NC State University Libraries
Added: August 13, 2021

2011 chapter

N-Linked Global Glycan Profiling by NanoLC Mass Spectrometry

In Methods in Molecular Biology (pp. 87–97).

By: M. Bereman* & D. Muddiman n

co-author countries: United States of America 🇺🇸
author keywords: N-linked glycans; NanoLC mass spectrometry; Glycoproteins; Glycosylation; Glycan profiling; Hydrophilic interaction chromatography; Glycobiology; Glycan algorithms
MeSH headings : Acetylglucosamine / metabolism; Asparagine; Blood Proteins / chemistry; Blood Proteins / metabolism; Chromatography, Liquid / methods; Glycoproteins / metabolism; Glycoside Hydrolases / metabolism; Hydrophobic and Hydrophilic Interactions; Mannose / metabolism; Mass Spectrometry / methods; Nanotechnology / methods; Nitrogen / chemistry; Peptide-N4-(N-acetyl-beta-glucosaminyl) Asparagine Amidase / metabolism; Polysaccharides / analysis; Polysaccharides / chemistry; Polysaccharides / isolation & purification; Polysaccharides / metabolism; Protein Denaturation; Solid Phase Extraction; Substrate Specificity; Tandem Mass Spectrometry
Sources: Crossref, ORCID
Added: February 12, 2021

2011 journal article

Advanced Structural Mass Spectrometry for Systems Biology: Pulling the Needles from Haystacks

Current Trends in Mass Spectrometry, 9(3), 18–23.

By: J. Enders, C. Goodwin, C. Marasco, K. Seale, J. Wikswo & J. McLean

Source: NC State University Libraries
Added: November 16, 2020

2011 journal article

Enzymatic Defects Underlying Hereditary Glutamate Cysteine Ligase Deficiency Are Mitigated by Association of the Catalytic and Regulatory Subunits

Biochemistry, 50(29), 6508–6517.

By: M. Willis*, Y. Liu*, E. Biterova*, M. Simpson*, H. Kim*, J. Lee*, J. Barycki*

co-author countries: United States of America 🇺🇸
MeSH headings : Animals; Catalytic Domain; Enzyme Stability; Glutamate-Cysteine Ligase / chemistry; Glutamate-Cysteine Ligase / deficiency; Glutamate-Cysteine Ligase / metabolism; Glutathione / biosynthesis; Homozygote; Humans; Kinetics; Mice; Models, Biological; Mutant Proteins / metabolism; Mutation / genetics; Protein Binding; Protein Structure, Secondary; Recombinant Proteins / metabolism; Saccharomyces cerevisiae / metabolism; Structural Homology, Protein; Temperature
Source: Crossref
Added: August 28, 2020

2011 journal article

Foreword

International Journal of Mass Spectrometry, 300(2-3), 72–73.

co-author countries: United States of America 🇺🇸
Sources: Crossref, ORCID
Added: February 24, 2020

2011 chapter

Peptide and Protein Analysis Using Ion Mobility-Mass Spectrometry

In Protein and Peptide Mass Spectrometry in Drug Discovery (pp. 139–174).

By: J. Enders*, M. Kliman*, S. Sundarapandian* & J. Mclean*

co-author countries: United States of America 🇺🇸

Contributors: J. Enders*, M. Kliman*, S. Sundarapandian* & J. Mclean*

Source: ORCID
Added: December 11, 2019

2011 journal article

Membrane protein complexes catalyze both 4-and 3-hydroxylation of cinnamic acid derivatives in monolignol biosynthesis

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 108(52), 21253–21258.

co-author countries: United States of America 🇺🇸
MeSH headings : Carboxylic Ester Hydrolases / chemistry; Carboxylic Ester Hydrolases / metabolism; Chromatography, Liquid; Coumaric Acids; DNA Primers / genetics; Hydroxylation; Immunoprecipitation; Kinetics; Lignin / biosynthesis; Mass Spectrometry; Membrane Proteins / chemistry; Membrane Proteins / metabolism; Microscopy, Confocal; Molecular Structure; Multiprotein Complexes / chemistry; Multiprotein Complexes / metabolism; Phenols; Phenylpropionates; Plasmids / genetics; Populus / metabolism; Propionates; Trans-Cinnamate 4-Monooxygenase / chemistry; Trans-Cinnamate 4-Monooxygenase / metabolism; Xylem / metabolism; Yeasts
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

Global optimization of the infrared matrix-assisted laser desorption electrospray ionization (IR MALDESI) source for mass spectrometry using statistical design of experiments

RAPID COMMUNICATIONS IN MASS SPECTROMETRY, 25(23), 3527–3536.

By: J. Barry n & D. Muddiman n

co-author countries: United States of America 🇺🇸
MeSH headings : Animals; Cattle; Cytochromes c / analysis; Cytochromes c / chemistry; Horses; Limit of Detection; Research Design; Spectrometry, Mass, Electrospray Ionization / methods; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization / methods
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

Evaluation of Normalization Methods on GeLC-MS/MS Label-Free Spectral Counting Data to Correct for Variation during Proteomic Workflows

JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 22(12), 2199–2208.

By: E. Gokce n, C. Shuford n, W. Franck n, R. Dean n & D. Muddiman n

co-author countries: United States of America 🇺🇸
author keywords: Label-free; Proteomics; Mass spectrometry; Total spectral count normalization; Normalized spectral abundance factor; Quantification; Spectral counting; Significance test; Fold-change; GeLC-MS/MS; nanoLC-MS; Orbitrap XL
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

Spectral Accuracy and Sulfur Counting Capabilities of the LTQ-FT-ICR and the LTQ-Orbitrap XL for Small Molecule Analysis

JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 22(12), 2269–2275.

co-author countries: United States of America 🇺🇸
author keywords: Electrospray ionization; FT-ICR-MS; Orbitrap-MS; Forensic analysis; Textiles; Trace evidence
MeSH headings : Chi-Square Distribution; Coloring Agents / chemistry; Forensic Sciences; Fourier Analysis; Mass Spectrometry / methods; Polyesters / chemistry; Sensitivity and Specificity; Sulfur / analysis; Textiles / analysis
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

One-year plasma N-linked glycome intra-individual and inter-individual variability in the chicken model of spontaneous ovarian adenocarcinoma

INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, 305(2-3), 79–86.

By: R. Dixon n, M. Bereman n, J. Petitte n, A. Hawkridge n & D. Muddiman n

co-author countries: United States of America 🇺🇸
author keywords: N-linked glycans; HILIC; FTMS; Longitudinal sampling
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

Stable-Isotope Labeled Hydrophobic Hydrazide Reagents for the Relative Quantification of N-Linked Glycans by Electrospray Ionization Mass Spectrometry

ANALYTICAL CHEMISTRY, 83(17), 6738–6745.

co-author countries: United States of America 🇺🇸
MeSH headings : Carbon Isotopes / chemistry; Glycopeptides / analysis; Glycosylation; Hydrazones / chemistry; Hydrophobic and Hydrophilic Interactions; Isotope Labeling; Polysaccharides / analysis; Spectrometry, Mass, Electrospray Ionization / methods
Sources: Web Of Science, ORCID
Added: August 6, 2018

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