Center for Environmental and Health Effects of PFAS - 2012 Chowdhury, Z., Shaw, J., Knappe, D., Roccaro, J., Randazzo, K., & Roberson, A. (2012). What are the impacts of a cVOC group regulation? Questions answered with a case study at Suffolk County Water Authority. Water Quality Technology Conference and Exposition 2012. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-84890729349&partnerID=MN8TOARS Kennedy, A., Reinert, A., Summers, R. S., Ferrer, I., Thurman, M., & Knappe, D. R. U. (2012). Scale-up of the GAC adsorption of trace organic compounds. Water Quality Technology Conference and Exposition 2012. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-84890579082&partnerID=MN8TOARS Fotta, M., Roccaro, J., & Knappe, D. R. U. (2012). Scale-up of granular activated carbon adsorbers for volatile organic compound removal from groundwater: Effect of carbon type. Water Quality Technology Conference and Exposition 2012. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-84890744863&partnerID=MN8TOARS Dudley, L.-A., Lindstrom, A., Strynar, M., Mcmillan, L., & Knappe, D. R. U. (2012). Removal of perfluorinated compounds by powdered activated carbon: Effects of adsorbent and background water characteristics. American Water Works Association Annual Conference and Exposition 2012, ACE 2012, 961–1003. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-84871533789&partnerID=MN8TOARS Fotta, M., Roccaro, J., & Knappe, D. R. U. (2012). Effect of activated carbon type on scale-up of adsorbers for volatile organic compound removal from groundwater. American Water Works Association Annual Conference and Exposition 2012, ACE 2012, 3188–3218. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-84871553369&partnerID=MN8TOARS Reinert, A. M., Kennedy, A., Scott Summers, R., Ferrer, I., Thurman, M., & Knappe, D. (2012). Comparing scale-up approaches to predict granular activated carbon absorber performance for micropollutant removal. American Water Works Association Annual Conference and Exposition 2012, ACE 2012, 1025–1056. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-84871574489&partnerID=MN8TOARS Detailed Review Paper on the State of the Science on Novel In Vitro and In Vivo Screening and Testing Methods and Endpoints for Evaluating Endocrine Disruptors. (2012). In OECD Series on Testing and Assessment. https://doi.org/10.1787/9789264221352-en Barlaz, M. A. (2012). Collection Efficiency: Critical Analysis of Published Literature. Invited Lecture presented at the US EPA WARM Landfill Gas Modeling Meeting, Arlington, VA. Levis, J., & Barlaz, M. (2012). Analysis of Landfill Times to Begin Collection, Begin Energy Recovery, Terminate Collection Under NSPS. Invited lecture presented at the US EPA WARM Landfill Gas Modeling Meeting, Arlington, VA. Barlaz, M. A. (2012). Collection Timeframe: Summary of Landfill Operator Survey Results. Presented at the US EPA WARM Landfill Gas Modeling Meeting, Arlington, VA. Barlaz, M. A. (2012). Updated k values based on using more detailed landfill gas collection and header pipe data. Presented at the US EPA Landfill NSPS Technical Meeting, Research Triangle Park, NC. Barlaz, M. A. (2012, March 27). Biodegradation in Landfills: Why It Happens and Implications for Packaging Design. Presented at the Environmental Research and Education Foundation Regional Summit on Sustainable Solid Waste Practices & Research, Austin, Texas. Levis, J., & Barlaz, M. A. (2012). Greenhouse Gas Mitigation Costs Associated with Solid Waste Management Policies. Presented at the Fourth International Symposium on Energy from Biomass and Waste, Venice, Italy. Milke, M., & Barlaz, M. A. (2012). Anaerobic Biodegradability of Wood and Wood Products: Reassessment and New Insights. Presented at the Fourth International Symposium on Energy from Biomass and Waste, Venice, Italy. Weaver, J. E., & Barlaz, M. A. (2012). Anaerobic Biodegradability of Plastics in Laboratory-Scale Landfill Reactors. Presented at the Global Waste Management Symposium, Phoenix, AZ. Lang, J. L., & Barlaz, M. A. (2012). Experimental Investigation of Hydraulic Properties and Sulfate Release from Construction and Demolition (C&D) Waste Fines. Presented at the Global Waste Management Symposium, Phoenix, AZ. Wang, X., Padgett, J. M., de la Cruz, F. B., & Barlaz, M. A. (2012). Biodegradability of Forest Products in Laboratory- and Field-Scale Municipal Solid Waste (MSW) Landfills. Presented at the Global Waste Management Symposium, Phoenix, AZ. Wang, X., Nagpure, A. S., DeCarolis, J. F., & Barlaz, M. A. (2012). Modernizing Models and Data on Methane Production from U.S. Municipal Solid Waste (MSW) Landfills. Presented at the Global Waste Management Symposium, Phoenix, AZ. Crest, M., Morris, J. W. F., Akerman, A., Barlaz, M. A., & Hayward-Higham, S. (2012). Step-Down Performance-Based Approach to Landfill Aftercare Completion and Reuse. Presented at the International Solid Waste Association (ISWA) Annual Congress, Florence, France. de la Cruz, F. B., & Barlaz, M. A. (2012). Hydrogen Sulfide Production from Different Sulfur-Containing Materials under Anaerobic Landfill Conditions. Presented at the Intercontinental Landfill Research Symposium, Lulea, Sweden. Lang, J. R., Field, J., Allred, B. M., & Barlaz, M. A. (2012). Fluorochemical Signatures in Municipal Waste and Landfill Leachate. Presented at the Intercontinental Landfill Research Symposium, Lulea, Sweden. Barlaz, M. A. (2012). Feasibility of Waste Sampling and Analysis for Post-Closure Care. Presented at the Intercontinental Landfill Research Symposium, Lulea, Sweden. Wang, X., Padgett, J. M., de la Cruz, F. B., & Barlaz, M. A. (2012). Wood Biodegradation in Laboratory- and Field-Scale Landfills. Presented at the Intercontinental Landfill Research Symposium, Lulea, Sweden. Wang, X., & Barlaz, M. A. (2012). Modernizing Methane Generation Models and Data from U.S. Landfills. Presented at the Intercontinental Landfill Research Symposium, Lulea, Sweden. De La Cruz, F. B., & Barlaz, M. A. (2012). Determination of Sources of Organic Matter in Landfills by Analysis of CuO Oxidation Products of Lignin. Presented at the Intercontinental Landfill Research Symposium, Lulea, Sweden. Ranjithan, S., Levis, J., Barlaz, M. A., & DeCarolis, J. (2012). Application of a multi-stage life-cycle optimization model to minimize cost and greenhouse emissions from solid waste management. Presented at the 2012 World Environmental & Water Resources Congress, Albuquerque, New Mexico. Kendig, E. L., Buesing, D. R., Christie, S. M., Cookman, C. J., Gear, R. B., Hugo, E. R., … Belcher, S. M. (2012). Estrogen-like disruptive effects of dietary exposure to bisphenol A or 17α-ethinyl estradiol in CD1 mice. International Journal of Toxicology, 31(6), 537–550. https://doi.org/10.1177/1091581812463254 Belcher, S. M., Chen, Y., Yan, S., & Wang, H.-S. (2012). Rapid estrogen receptor-mediated mechanisms determine the sexually dimorphic sensitivity of ventricular myocytes to 17β-estradiol and the environmental endocrine disruptor bispheno A. Endocrinology, 153(2), 712–720. https://doi.org/10.1210/en.2011-1772 Williams, K., Ghosh, R., Giridhar, P. V., Gu, G., Case, T., Belcher, S. M., & Kasper, S. (2012). Inhibition of stathmin1 accelerates the metastatic process. Cancer Research, 72(20), 5407–5417. https://doi.org/10.1158/0008-5472.CAN-12-1158 Oh, Y., Franck, W. L., Han, S.-O., Shows, A., Gokce, E., Muddiman, D. C., & Dean, R. A. (2012). Polyubiquitin Is Required for Growth, Development and Pathogenicity in the Rice Blast Fungus Magnaporthe oryzae. PLoS ONE, 7(8), e42868. https://doi.org/10.1371/journal.pone.0042868 Sedykh, A., Fourches, D., Duan, J., Hucke, O., Garneau, M., Zhu, H., … Tropsha, A. (2012). Human Intestinal Transporter Database: QSAR Modeling and Virtual Profiling of Drug Uptake, Efflux and Interactions. Pharmaceutical Research, 30(4), 996–1007. https://doi.org/10.1007/S11095-012-0935-X Koryakina, I., McArthur, J., Randall, S., Draelos, M. M., Musiol, E. M., Muddiman, D. C., … Williams, G. J. (2012). Poly Specific trans-Acyltransferase Machinery Revealed via Engineered Acyl-CoA Synthetases. ACS Chemical Biology, 8(1), 200–208. https://doi.org/10.1021/cb3003489 Muddiman, D. C. (2012). Alexander R. Ivanov, Alexander V. Lazarev (Eds): Sample preparation in biological mass spectrometry. Analytical and Bioanalytical Chemistry, 404(5), 1331–1332. https://doi.org/10.1007/S00216-012-6260-8 Whitworth, K. W., Haug, L. S., Baird, D. D., Becher, G., Hoppin, J. A., Eggesbo, M., … Longnecker, M. P. (2012). P60—Preliminary results on subfecundity and plasma concentrations of perfluorinated compounds during pregnancy in the Norwegian Mother and Child Cohort Study, 2002–2004. Reproductive Toxicology, 33(4), 620–621. https://doi.org/10.1016/j.reprotox.2011.11.094 Kendziorski, J. A., Kendig, E. L., Gear, R. B., & Belcher, S. M. (2012). Strain specific induction of pyometra and differences in immune responsiveness in mice exposed to 17α-ethinyl estradiol or the endocrine disrupting chemical bisphenol A. Reproductive Toxicology, 34(1), 22–30. https://doi.org/10.1016/j.reprotox.2012.03.001 Kumar, J., Brill, E. D., Mahinthakumar, G., & Ranjithan, S. R. (2012). Contaminant source characterization in water distribution systems using binary signals. Journal of Hydroinformatics, 14(3), 585–602. https://doi.org/10.2166/hydro.2012.073 Kaplan, P. O., DeCarolis, J. F., & Barlaz, M. A. (2012). Life Cycle Comparison of Waste-to-Energy to Sanitary Landfill. In Encyclopedia of Sustainability Science and Technology (pp. 5909–5934). https://doi.org/10.1007/978-1-4419-0851-3_409 Shuford, C. M., Li, Q., Sun, Y.-H., Chen, H.-C., Wang, J., Shi, R., … Muddiman, D. C. (2012). Comprehensive Quantification of Monolignol-Pathway Enzymes in Populus trichocarpa by Protein Cleavage Isotope Dilution Mass Spectrometry. Journal of Proteome Research, 11(6), 3390–3404. https://doi.org/10.1021/pr300205a Barandouzi, M. A., Mahinthakumar, G., Ranjithan, R., & Brill, E. D. (2012). Probabilistic Mapping of Water Leakage Characterizations Using a Bayesian Approach. World Environmental and Water Resources Congress 2012. Presented at the World Environmental And Water Resources Congress 2012. https://doi.org/10.1061/9780784412312.326 Sreepathi, S., Brill, D., Ranjithan, R., & Mahinthakumar, G. (K. (2012). Parallel Multi-Swarm Optimization Framework for Search Problems in Water Distribution Systems. World Environmental and Water Resources Congress 2012. Presented at the World Environmental And Water Resources Congress 2012. https://doi.org/10.1061/9780784412312.323 Abichou, T., Clark, J., Chanton, J., Hater, G., Green, R., Goldsmith, D., … Swan, N. (2012). A new approach to characterize emission contributions from area sources during optical remote sensing technique testing. Journal of the Air & Waste Management Association, 62(12), 1403–1410. https://doi.org/10.1080/10962247.2012.716384 Koutros, S., Beane Freeman, L. E., Lubin, J. H., Heltshe, S. L., Andreotti, G., Barry, K. H., … Alavanja, M. C. R. (2012). Risk of Total and Aggressive Prostate Cancer and Pesticide Use in the Agricultural Health Study. American Journal of Epidemiology, 177(1), 59–74. https://doi.org/10.1093/aje/kws225 Waggoner, J. K., Henneberger, P. K., Kullman, G. J., Umbach, D. M., Kamel, F., Beane Freeman, L. E., … Hoppin, J. A. (2012). Pesticide use and fatal injury among farmers in the Agricultural Health Study. International Archives of Occupational and Environmental Health, 86(2), 177–187. https://doi.org/10.1007/s00420-012-0752-x Angel, T. E., Aryal, U. K., Hengel, S. M., Baker, E. S., Kelly, R. T., Robinson, E. W., & Smith, R. D. (2012). Mass spectrometry-based proteomics: existing capabilities and future directions. Chemical Society Reviews, 41(10), 3912–3928. https://doi.org/10.1039/c2cs15331a Burnum, K. E., Hirota, Y., Baker, E. S., Yoshie, M., Ibrahim, Y. M., Monroe, M. E., … Dey, S. K. (2012). Uterine Deletion of Trp53 Compromises Antioxidant Responses in the Mouse Decidua. Endocrinology, 153(9), 4568–4579. https://doi.org/10.1210/en.2012-1335 Baker, E. S., Liu, T., Petyuk, V. A., Burnum-Johnson, K. E., Ibrahim, Y. M., Anderson, G. A., & Smith, R. D. (2012). Mass spectrometry for translational proteomics: progress and clinical implications. Genome Medicine, 4(8). https://doi.org/10.1186/gm364 Hengel, S. M., Floyd, E., Baker, E. S., Zhao, R., Wu, S., & Pasa-Tolic, L. (2012). Evaluation of SDS Depletion Using an Affinity Spin Column and IMS-MS Detection. Proteomics, 12(21), 3138–3142. https://doi.org/10.1002/pmic.201200168 Whitworth, K. W., Haug, L. S., Baird, D. D., Becher, G., Hoppin, J. A., Skjaerven, R., … Longnecker, M. P. (2012). Perfluorinated Compounds and Subfecundity in Pregnant Women. Epidemiology, 23(2), 257–263. https://doi.org/10.1097/EDE.0b013e31823b5031 Starks, S. E., Hoppin, J. A., Kamel, F., Lynch, C. F., Jones, M. P., Alavanja, M. C., … Gerr, F. (2012). Peripheral Nervous System Function and Organophosphate Pesticide Use among Licensed Pesticide Applicators in the Agricultural Health Study. Environmental Health Perspectives, 120(4), 515–520. https://doi.org/10.1289/ehp.1103944 Beane Freeman, L. E., DeRoos, A. J., Koutros, S., Blair, A., Ward, M. H., Alavanja, M., & Hoppin, J. A. (2012). Poultry and livestock exposure and cancer risk among farmers in the agricultural health study. Cancer Causes & Control, 23(5), 663–670. https://doi.org/10.1007/s10552-012-9921-1 Kamel, F., Umbach, D. M., Bedlack, R. S., Richards, M., Watson, M., Alavanja, M. C. R., … Sandler, D. P. (2012). Pesticide exposure and amyotrophic lateral sclerosis. NeuroToxicology, 33(3), 457–462. https://doi.org/10.1016/j.neuro.2012.04.001 Whitworth, K. W., Haug, L. S., Baird, D. D., Becher, G., Hoppin, J. A., Skjaerven, R., … Longnecker, M. P. (2012). Perfluorinated Compounds in Relation to Birth Weight in the Norwegian Mother and Child Cohort Study. American Journal of Epidemiology, 175(12), 1209–1216. https://doi.org/10.1093/aje/kwr459 Heltshe, S. L., Lubin, J. H., Koutros, S., Coble, J. B., Ji, B.-T., Alavanja, M. C. R., … Beane Freeman, L. E. (2012). Using multiple imputation to assign pesticide use for non-responders in the follow-up questionnaire in the Agricultural Health Study. Journal of Exposure Science & Environmental Epidemiology, 22(4), 409–416. https://doi.org/10.1038/jes.2012.31 Andreotti, G., Koutros, S., Berndt, S. I., Hughes Barry, K., Hou, L., Hoppin, J. A., … Alavanja, M. C. R. (2012). The Interaction between Pesticide Use and Genetic Variants Involved in Lipid Metabolism on Prostate Cancer Risk. Journal of Cancer Epidemiology, 2012, 1–11. https://doi.org/10.1155/2012/358076 DellaValle, C. T., Hoppin, J. A., Hines, C. J., Andreotti, G., & Alavanja, M. C. R. (2012). Risk-Accepting Personality and Personal Protective Equipment Use Within the Agricultural Health Study. Journal of Agromedicine, 17(3), 264–276. https://doi.org/10.1080/1059924X.2012.686390 Racine, E. F., Laditka, S. B., Dmochowski, J., Alavanja, M. C. R., Lee, D.-C., & Hoppin, J. A. (2012). Farming activities and carrying and lifting: The agricultural health study. Journal of Physical Activity and Health, 9(1), 39–47. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-84862940731&partnerID=MN8TOARS Starks, S. E., Gerr, F., Kamel, F., Lynch, C. F., Jones, M. P., Alavanja, M. C., … Hoppin, J. A. (2012). Neurobehavioral function and organophosphate insecticide use among pesticide applicators in the Agricultural Health Study. Neurotoxicology and Teratology, 34(1), 168–176. https://doi.org/10.1016/j.ntt.2011.08.014 Goldman, S. M., Kamel, F., Ross, G. W., Jewell, S. A., Bhudhikanok, G. S., Umbach, D., … Tanner, C. M. (2012). Head injury, alpha-synuclein Rep1, and Parkinson's disease. Annals of Neurology, 71(1), 40–48. https://doi.org/10.1002/ana.22499 Barry, K. H., Koutros, S., Lubin, J. H., Coble, J. B., Barone-Adesi, F., Beane Freeman, L. E., … Alavanja, M. C. R. (2012). Methyl bromide exposure and cancer risk in the Agricultural Health Study. Cancer Causes & Control, 23(6), 807–818. https://doi.org/10.1007/s10552-012-9949-2 Starks, S. E., Gerr, F., Kamel, F., Lynch, C. F., Alavanja, M. C., Sandler, D. P., & Hoppin, J. A. (2012). High pesticide exposure events and central nervous system function among pesticide applicators in the Agricultural Health Study. International Archives of Occupational and Environmental Health, 85(5), 505–515. https://doi.org/10.1007/s00420-011-0694-8 Endres, S. M., Green, B. J., Henneberger, P. K., Germolec, D. R., Bledsoe, T. A., Beezhold, D. H., … Hoppin, J. A. (2012). Fungal and atopic sensitization are low among farmers in the Agricultural Health Study. Journal of Allergy and Clinical Immunology, 130(1), 267–270.e1. https://doi.org/10.1016/j.jaci.2012.04.018 Buckley, J. P., Palmieri, R. T., Matuszewski, J. M., Herring, A. H., Baird, D. D., Hartmann, K. E., & Hoppin, J. A. (2012). Consumer product exposures associated with urinary phthalate levels in pregnant women. Journal of Exposure Science & Environmental Epidemiology, 22(5), 468–475. https://doi.org/10.1038/jes.2012.33 Cupul-Uicab, L. A., Skjaerven, R., Haug, K., Travlos, G. S., Wilson, R. E., Eggesbø, M., … Longnecker, M. P. (2012). Exposure to Tobacco Smoke in Utero and Subsequent Plasma Lipids, ApoB, and CRP among Adult Women in the MoBa Cohort. Environmental Health Perspectives, 120(11), 1532–1537. https://doi.org/10.1289/ehp.1104563 Hoppin, J. A., Long, S., Umbach, D. M., Lubin, J. H., Starks, S. E., Gerr, F., … Sandler, D. P. (2012). Lifetime organophosphorous insecticide use among private pesticide applicators in the Agricultural Health Study. Journal of Exposure Science & Environmental Epidemiology, 22(6), 584–592. https://doi.org/10.1038/jes.2012.79 Goldman, S. M., Kamel, F., Ross, G. W., Bhudhikanok, G. S., Hoppin, J. A., Korell, M., … Tanner, C. M. (2012). Genetic modification of the association of paraquat and Parkinson's disease. Movement Disorders, 27(13), 1652–1658. https://doi.org/10.1002/mds.25216 Wiegers, T. C., Davis, A. P., & Mattingly, C. J. (2012). Collaborative biocuration--text-mining development task for document prioritization for curation. Database, 2012(0), bas037–bas037. https://doi.org/10.1093/database/bas037 Davis, A. P., Wiegers, T. C., Rosenstein, M. C., & Mattingly, C. J. (2012). MEDIC: a practical disease vocabulary used at the Comparative Toxicogenomics Database. Database, 2012(0), bar065–bar065. https://doi.org/10.1093/database/bar065 Cheng, K. C., Hinton, D. E., Mattingly, C. J., & Planchart, A. (2012). Aquatic models, genomics and chemical risk management. Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology, 155(1), 169–173. https://doi.org/10.1016/j.cbpc.2011.06.009 Bello, S. M., Richardson, J. E., Davis, A. P., Wiegers, T. C., Mattingly, C. J., Dolan, M. E., … Eppig, J. T. (2012). Disease model curation improvements at Mouse Genome Informatics. Database, 2012(0), bar063–bar063. https://doi.org/10.1093/database/bar063 Davis, A. P., Murphy, C. G., Johnson, R., Lay, J. M., Lennon-Hopkins, K., Saraceni-Richards, C., … Mattingly, C. J. (2012). The Comparative Toxicogenomics Database: update 2013. Nucleic Acids Research, 41(D1), D1104–D1114. https://doi.org/10.1093/nar/gks994 Judson, R. S., Martin, M. T., Egeghy, P., Gangwal, S., Reif, D. M., Kothiya, P., … A.M. (2012). Aggregating Data for Computational Toxicology Applications: The U.S. Environmental Protection Agency (EPA) Aggregated Computational Toxicology Resource (ACToR) System. International Journal of Molecular Sciences, 13(2), 1805–1831. https://doi.org/10.3390/ijms13021805 Padilla, S., Corum, D., Padnos, B., Hunter, D. L., Beam, A., Houck, K. A., … Reif, D. M. (2012). Zebrafish developmental screening of the ToxCast™ Phase I chemical library. Reproductive Toxicology, 33(2), 174–187. https://doi.org/10.1016/j.reprotox.2011.10.018 Kavlock, R., Chandler, K., Houck, K., Hunter, S., Judson, R., Kleinstreuer, N., … Dix, D. (2012). Update on EPA’s ToxCast Program: Providing High Throughput Decision Support Tools for Chemical Risk Management. Chem. Res. Toxicol., 25(7), 1287–1302. https://doi.org/10.1021/tx3000939 Gangwal, S., Reif, D. M., Mosher, S., Egeghy, P. P., Wambaugh, J. F., Judson, R. S., & Hubal, E. A. C. (2012). Incorporating exposure information into the toxicological prioritization index decision support framework. Science of The Total Environment, 435-436, 316–325. https://doi.org/10.1016/j.scitotenv.2012.06.086 Dix, D. J., Houck, K. A., Judson, R. S., Kleinstreuer, N. C., Knudsen, T. B., Martin, M. T., … Kavlock, R. J. (2012). Incorporating biological, chemical, and toxicological knowledge into predictive models of toxicity. Toxicological Sciences, 130(2), 440–441. https://doi.org/10.1093/toxsci/kfs281 Gory, J. J., Sweeney, H. C., Reif, D. M., & Motsinger-Reif, A. A. (2012). A comparison of internal model validation methods for multifactor dimensionality reduction in the case of genetic heterogeneity. BMC Research Notes, 5(1), 623. https://doi.org/10.1186/1756-0500-5-623 Hoover, K., Marceau, R., Harris, T., Reif, D., & Motsinger-Reif, A. (2012). A comparison of GE optimized neural networks and decision trees. Proceedings of the fourteenth international conference on Genetic and evolutionary computation conference companion - GECCO Companion '12, 611–614. https://doi.org/10.1145/2330784.2330885 Shah, R. N., Rodriguez-Nunez, I., Eason, D. D., Haire, R. N., Bertrand, J. Y., Wittamer, V., … al. (2012). Development and Characterization of Anti-Nitr9 Antibodies. Advances in Hematology, 2012, 1–9. https://doi.org/10.1155/2012/596925 Nordone, S. K., Li, J., D’Annibale, M. A., Birkenheuer, A. J., Levy, M. G., Yoder, J. A., … Adler, K. B. (2012). Myristoylated Alanine-Rich C Kinase Substrate (MARCKS) Protein Plays A Critical Role In Production Of Proinflammatory Cytokines By Isolated Canine Neutrophils. A67. ACUTE LUNG INJURY AND ACUTE RESPIRATORY DISTRESS SYNDROME: BIOLOGICAL MECHANISMS. https://doi.org/10.1164/ajrccm-conference.2012.185.1_meetingabstracts.a2106 Sarkar, P., Randall, S. M., Muddiman, D. C., & Rao, B. M. (2012). Targeted Proteomics of the Secretory Pathway Reveals the Secretome of Mouse Embryonic Fibroblasts and Human Embryonic Stem Cells. MOLECULAR & CELLULAR PROTEOMICS, 11(12), 1829–1839. https://doi.org/10.1074/mcp.m112.020503 Miller, H. D., Clark, B. W., Hinton, D. E., Whitehead, A., Martin, S., Kwok, K. W., & Kullman, S. W. (2012). Anchoring Ethinylestradiol Induced Gene Expression Changes with Testicular Morphology and Reproductive Function in the Medaka. PLOS ONE, 7(12). https://doi.org/10.1371/journal.pone.0052479 Morris, J. W. F., Crest, M., Barlaz, M. A., Spokas, K. A., Akerman, A., & Yuan, L. (2012). Improved methodology to assess modification and completion of landfill gas management in the aftercare period. WASTE MANAGEMENT, 32(12), 2364–2373. https://doi.org/10.1016/j.wasman.2012.07.017 Wu, C. H., Arighi, C. N., Cohen, K. B., Hirschman, L., Krallinger, M., Lu, Z. Y., … al. (2012, December 5). BioCreative-2012 Virtual Issue. DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION. https://doi.org/10.1093/database/bas049 Davis, A. P., Johnson, R. J., Lennon-Hopkins, K., Sciaky, D., Rosenstein, M. C., Wiegers, T. C., & Mattingly, C. J. (2012). Targeted journal curation as a method to improve data currency at the Comparative Toxicogenomics Database. Database-The Journal of Biological Databases and Curation. Matsui, Y., Yoshida, T., Nakao, S., Knappe, D. R. U., & Matsushita, T. (2012). Characteristics of competitive adsorption between 2-methylisoborneol and natural organic matter on superfine and conventionally sized powdered activated carbons. WATER RESEARCH, 46(15), 4741–4749. https://doi.org/10.1016/j.watres.2012.06.002 Collier, T. S., & Muddiman, D. C. (2012). [Review of Analytical strategies for the global quantification of intact proteins]. AMINO ACIDS, 43(3), 1109–1117. https://doi.org/10.1007/s00726-012-1285-z Shuford, C. M., Sederoff, R. R., Chiang, V. L., & Muddiman, D. C. (2012). Peptide Production and Decay Rates Affect the Quantitative Accuracy of Protein Cleavage Isotope Dilution Mass Spectrometry (PC-IDMS). MOLECULAR & CELLULAR PROTEOMICS, 11(9), 814–823. https://doi.org/10.1074/mcp.o112.017145 Wang, J. P., Shuford, C. M., Li, Q., Song, J., Lin, Y.-C., Sun, Y.-H., … Chiang, V. L. (2012). Functional redundancy of the two 5-hydroxylases in monolignol biosynthesis of Populus trichocarpa: LC-MS/MS based protein quantification and metabolic flux analysis. PLANTA, 236(3), 795–808. https://doi.org/10.1007/s00425-012-1663-5 Bareither, C. A., Benson, C. H., Edil, T. B., & Barlaz, M. A. (2012). Abiotic and Biotic Compression of Municipal Solid Waste. JOURNAL OF GEOTECHNICAL AND GEOENVIRONMENTAL ENGINEERING, 138(8), 877–888. https://doi.org/10.1061/(asce)gt.1943-5606.0000660 Jewett, S. A., Yoder, J. A., & Ivanisevic, A. (2012). Surface modifications on InAs decrease indium and arsenic leaching under physiological conditions. APPLIED SURFACE SCIENCE, 261, 842–850. https://doi.org/10.1016/j.apsusc.2012.08.115 King, B. L., Davis, A. P., Rosenstein, M. C., Wiegers, T. C., & Mattingly, C. J. (2012). Ranking Transitive Chemical-Disease Inferences Using Local Network Topology in the Comparative Toxicogenomics Database. PLOS ONE, 7(11). https://doi.org/10.1371/journal.pone.0046524 Hygh, J. S., DeCarolis, J. F., Hill, D. B., & Ranjithan, S. R. (2012). Multivariate regression as an energy assessment tool in early building design. BUILDING AND ENVIRONMENT, 57, 165–175. https://doi.org/10.1016/j.buildenv.2012.04.021 Gokce, E., Franck, W. L., Oh, Y., Dean, R. A., & Muddiman, D. C. (2012). In-Depth Analysis of the Magnaporthe oryzae Conidial Proteome. JOURNAL OF PROTEOME RESEARCH, 11(12), 5827–5835. https://doi.org/10.1021/pr300604s Kim, K. S., Funk, D. H., & Buchwalter, D. B. (2012). Dietary (periphyton) and aqueous Zn bioaccumulation dynamics in the mayfly Centroptilum triangulifer. ECOTOXICOLOGY, 21(8), 2288–2296. https://doi.org/10.1007/s10646-012-0985-1 Li, Q.-J., Zhao, G.-Z., Chen, L.-J., Tan, H., Wang, C.-H., Wang, D.-X., … Yang, H.-B. (2012). Coordination-Driven Self-Assembly of Charged and Neutral Dendritic Tetrakis(ferrocenyl) Rhomboids. ORGANOMETALLICS, 31(20), 7241–7247. https://doi.org/10.1021/om3007932 Walker, S. H., Carlisle, B. C., & Muddiman, D. C. (2012). Systematic Comparison of Reverse Phase and Hydrophilic Interaction Liquid Chromatography Platforms for the Analysis of N-Linked Glycans. ANALYTICAL CHEMISTRY, 84(19), 8198–8206. https://doi.org/10.1021/ac3012494 Mirghani, B. Y., Zechman, E. M., Ranjithan, R. S., & Mahinthakumar, G. (2012). Enhanced Simulation-Optimization Approach Using Surrogate Modeling for Solving Inverse Problems. ENVIRONMENTAL FORENSICS, 13(4), 348–363. https://doi.org/10.1080/15275922.2012.702333 Harton, S. E., Pingali, S. V., Nunnery, G. A., Baker, D. A., Walker, S. H., Muddiman, D. C., … Langan, P. (2012). Evidence for Complex Molecular Architectures for Solvent-Extracted Lignins. ACS MACRO LETTERS, 1(5), 568–573. https://doi.org/10.1021/mz300045e Mattingly, C. J., McKone, T. E., Callahan, M. A., Blake, J. A., & Hubal, E. A. C. (2012). Providing the Missing Link: the Exposure Science Ontology ExO. ENVIRONMENTAL SCIENCE & TECHNOLOGY, 46(6), 3046–3053. https://doi.org/10.1021/es2033857 Poteat, M. D., Diaz-Jaramillo, M., & Buchwalter, D. B. (2012). Divalent metal (Ca, Cd, Mn, Zn) uptake and interactions in the aquatic insect Hydropsyche sparna. JOURNAL OF EXPERIMENTAL BIOLOGY, 215(9), 1575–1583. https://doi.org/10.1242/jeb.063412 Bareither, C. A., Breitmeyer, R. J., Benson, C. H., Barlaz, M. A., & Edil, T. B. (2012). Deer Track Bioreactor Experiment: Field-Scale Evaluation of Municipal Solid Waste Bioreactor Performance. JOURNAL OF GEOTECHNICAL AND GEOENVIRONMENTAL ENGINEERING, 138(6), 658–670. https://doi.org/10.1061/(asce)gt.1943-5606.0000636 Liu, L., Zechman, E. M., Mahinthakumar, G., & Ranjithan, S. R. (2012). Coupling of logistic regression analysis and local search methods for characterization of water distribution system contaminant source. ENGINEERING APPLICATIONS OF ARTIFICIAL INTELLIGENCE, 25(2), 309–316. https://doi.org/10.1016/j.engappai.2011.10.009 Law, S. H. W., Redelings, B. D., & Kullman, S. W. (2012). Comparative Genomics of Duplicate gamma-Glutamyl Transferase Genes in Teleosts: Medaka (Oryzias latipes), Stickleback (Gasterosteus aculeatus), Green Spotted Pufferfish (Tetraodon nigroviridis), Fugu (Takifugu rubripes), and Zebrafish (Danio rerio). JOURNAL OF EXPERIMENTAL ZOOLOGY PART B-MOLECULAR AND DEVELOPMENTAL EVOLUTION, 318B(1), 35–49. https://doi.org/10.1002/jez.b.21439 Laner, D., Crest, M., Scharff, H., Morris, J. W. F., & Barlaz, M. (2012). A review of approaches for the long-term management of municipal solid waste landfills. Waste Management (New York, N.Y.), Vol. 32, pp. 498–512. https://doi.org/10.1016/j.wasman.2011.11.010 Yazdani, R., Barlaz, M. A., Augenstein, D., Kayhanian, M., & Tchobanoglous, G. (2012). Performance evaluation of an anaerobic/aerobic landfill-based digester using yard waste for energy and compost production. WASTE MANAGEMENT, 32(5), 912–919. https://doi.org/10.1016/j.wasman.2012.01.003 Liu, L., Zechman, E. M., Mahinthakumar, G., & Ranjithan, S. R. (2012). Identifying contaminant sources for water distribution systems using a hybrid method. CIVIL ENGINEERING AND ENVIRONMENTAL SYSTEMS, 29(2), 123–136. https://doi.org/10.1080/10286608.2012.663360 Maurer, H. H., & Muddiman, D. C. (2012, May). High-resolution mass spectrometry. ANALYTICAL AND BIOANALYTICAL CHEMISTRY, Vol. 403, pp. 1201–1202. https://doi.org/10.1007/s00216-012-5959-x Haire, R. N., Cannon, J. P., O&apos, Driscoll, M. L., Ostrov, D. A., Mueller, M. G., … Yoder, J. A. (2012). Genomic and functional characterization of the diverse immunoglobulin domain-containing protein (DICP) family. Genomics, 99(5), 282–291. https://doi.org/10.1016/j.ygeno.2012.02.004 Mattingly, J. (2012). Computation of Neutron Multiplicity Statistics Using Deterministic Transport. IEEE TRANSACTIONS ON NUCLEAR SCIENCE, 59(2), 314–322. https://doi.org/10.1109/tns.2012.2185060 Sarkar, P., Collier, T. S., Randall, S. M., Muddiman, D. C., & Rao, B. M. (2012). The subcellular proteome of undifferentiated human embryonic stem cells. PROTEOMICS, 12(3), 421–430. https://doi.org/10.1002/pmic.201100507 Staley, B. F., Reyes, F. L., III, & Barlaz, M. A. (2012). Comparison of Bacteria and Archaea communities in municipal solid waste, individual refuse components, and leachate. FEMS MICROBIOLOGY ECOLOGY, 79(2), 465–473. https://doi.org/10.1111/j.1574-6941.2011.01239.x Saquing, J. M., Knappe, D. R. U., & Barlaz, M. A. (2012). Fate and transport of phenol in a packed bed reactor containing simulated solid waste. WASTE MANAGEMENT, 32(2), 327–334. https://doi.org/10.1016/j.wasman.2011.09.017 Morckel, A. R., Lusic, H., Farzana, L., Yoder, J. A., Deiters, A., & Nascone-Yoder, N. M. (2012). A photoactivatable small-molecule inhibitor for light-controlled spatiotemporal regulation of Rho kinase in live embryos. DEVELOPMENT, 139(2), 437–442. https://doi.org/10.1242/dev.072165 Dong, W., Hinton, D. E., & Kullman, S. W. (2012). TCDD Disrupts Hypural Skeletogenesis during Medaka Embryonic Development. TOXICOLOGICAL SCIENCES, 125(1), 91–104. https://doi.org/10.1093/toxsci/kfr284 Shuford, C. M., Poteat, M. D., Buchwalter, D. B., & Muddiman, D. C. (2012). Absolute quantification of free glutathione and cysteine in aquatic insects using isotope dilution and selected reaction monitoring. ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 402(1), 357–366. https://doi.org/10.1007/s00216-011-5416-2