Works Published in 2006
Displaying works 21 - 40 of 79 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2006 journal article
Identification of Subunit−Subunit Interactions in Bacteriophage P22 Procapsids by Chemical Cross-linking and Mass Spectrometry
Journal of Proteome Research, 5(2), 370–377.
author keywords: bacteriophage P22; capsid interactions; chemical cross-linking; mass spectrometry
MeSH headings : Amino Acid Substitution / genetics; Bacteriophage P22 / metabolism; Capsid / metabolism; Capsid Proteins / genetics; Capsid Proteins / metabolism; Cross-Linking Reagents; Cysteine / chemistry; Cysteine / genetics; Mass Spectrometry; Models, Molecular; Protein Binding; Protein Subunits / metabolism; Threonine / chemistry; Threonine / genetics; Virus Assembly
TL;DR:
To build a detailed structure model, the secondary structure elements of the P22 coat protein are predicted, and the prediction onto identified helical elements of cryoEM 3D reconstruction is attempted.
(via Semantic Scholar)
Sources: Crossref, ORCID
Added: August 28, 2020
2006 journal article
Chromatin Assembly Factor 1 Interacts with Histone H3 Methylated at Lysine 79 in the Processes of Epigenetic Silencing and DNA Repair†
Biochemistry, 45(9), 2852–2861.
MeSH headings : Amino Acid Sequence; Cell Extracts; Chromatin Assembly Factor-1; Chromosomal Proteins, Non-Histone / genetics; Chromosomal Proteins, Non-Histone / isolation & purification; Chromosomal Proteins, Non-Histone / metabolism; DNA Repair / physiology; DNA-Binding Proteins / genetics; DNA-Binding Proteins / isolation & purification; DNA-Binding Proteins / metabolism; Epigenesis, Genetic / physiology; Gene Silencing; Histones / metabolism; Lysine / metabolism; Mass Spectrometry; Methylation; Molecular Sequence Data; Nucleosomes / metabolism; S Phase; Saccharomyces cerevisiae / metabolism; Silent Information Regulator Proteins, Saccharomyces cerevisiae / metabolism
TL;DR:
Together, these data indicate that CAF-1 interacts with H3 methylated at lysine 79 during the processes of epigenetic silencing and DNA repair.
(via Semantic Scholar)
Sources: Crossref, ORCID
Added: August 28, 2020
2006 chapter
Surface chemistry effects in activated carbon adsorption of industrial pollutants
In Interface Science and Technology (Vol. 10, pp. 155–177).
Contributors: D. Knappe n
UN Sustainable Development Goal Categories
6. Clean Water and Sanitation
(Web of Science; OpenAlex)
11. Sustainable Cities and Communities
(Web of Science)
Sources: Crossref, ORCID, NC State University Libraries
Added: August 28, 2020
2006 journal article
Focus in Honor of James A. McCloskey, Recipient of the 2005 ASMS award for a distinguished contribution in mass spectrometry
Journal of the American Society for Mass Spectrometry, 17(10), I1–I2.
MeSH headings : Awards and Prizes; Biochemistry; Chemistry, Analytic; History, 20th Century; History, 21st Century; Mass Spectrometry; Nucleic Acids / analysis; Texas; Utah
link.springer.com (publisher PDF)
Sources: Crossref, ORCID
Added: February 24, 2020
2006 journal article
PNA/dsDNA complexes: Site specific binding and dsDNA biosensor applications
Journal of the American Chemical Society, 128(26), 8484–8492.
Contributors: E. Baker* , J. Hong*, B. Gaylord*, G. Bazan * & M. Bowers *
MeSH headings : Biosensing Techniques / methods; DNA / chemistry; DNA Probes / chemistry; Electrophoresis, Polyacrylamide Gel; Fluorescence Resonance Energy Transfer; Mass Spectrometry / methods; Molecular Structure; Peptide Nucleic Acids / chemistry; Sensitivity and Specificity
TL;DR:
The capability and specificity of binding indicates that the CCP/PNA assay is a feasible detection method for dsDNA and eliminates the need for thermal denaturing steps typically required for DNA hybridization probe assays.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
7. Affordable and Clean Energy
(OpenAlex)
Source: ORCID
Added: December 5, 2019
2006 journal article
Non-covalent complexes of biological interest: Nucleotide-drug interactions and peptide/protein self assembly
Abstracts of Papers of the American Chemical Society, 231. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000238125900429&KeyUID=WOS:000238125900429
Contributors: M. Bowers, S. Bernstein, E. Baker , T. Wyttenbach, J. Shea & D. Teplow
Source: ORCID
Added: December 5, 2019
2006 journal article
G-quadruplexes in telomeric repeats are conserved in a solvent-free environment
International Journal of Mass Spectrometry, 253(3), 225–237.
Contributors: E. Baker* , S. Bernstein *, V. Gabelica *, E. De Pauw * & M. Bowers *
author keywords: ion mobility; G-quadruplexes; DNA
TL;DR:
To determine if G-quadruplexes are present in a solvent-free environment, different lengths of the telomeric repeat d(T2AG3)n and dTG4T were investigated with mass spectrometry, ion mobility and molecular dynamics calculations.
(via Semantic Scholar)
Source: ORCID
Added: December 5, 2019
2006 journal article
Cyclo[n]pyrroles: Size and site-specific binding to G-quadruplexes
Journal of the American Chemical Society, 128(8), 2641–2648.
Contributors: E. Baker* , J. Lee*, J. Sessler * & M. Bowers *
MeSH headings : Binding Sites; DNA / chemistry; DNA / metabolism; Enzyme Inhibitors / chemistry; Enzyme Inhibitors / pharmacology; G-Quadruplexes; Guanine / chemistry; Guanine / metabolism; Models, Molecular; Nucleic Acid Conformation; Porphyrins / chemistry; Pyrroles / chemistry; Pyrroles / pharmacology; Spectrometry, Mass, Electrospray Ionization; Substrate Specificity; Telomerase / antagonists & inhibitors; Thermodynamics
TL;DR:
Diprotonated cyclo[n]pyrroles represent a set of expanded porphyrin analogues with structures similar to that of telomestatin, a natural product known to bind to and stabilize G-quadruplexes, and it is inferred that external stacking represents the dominant binding mode for the interaction of cyclo(n)pyrrole with d(T(2)AG(3))(4).
(via Semantic Scholar)
Source: ORCID
Added: December 5, 2019
2006 journal article
ANYL 227-Exploring the conformational diversity of proteins and peptides using high-resolution FAIMS and IMS
Abstracts of Papers of the American Chemical Society, 232. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000207781601223&KeyUID=WOS:000207781601223
Contributors: K. Tang, A. Shvartsburg, F. Li, Y. Ibrahim, D. Prior, M. Buschbach, E. Baker , R. Smith
Source: ORCID
Added: December 5, 2019
2006 journal article
The Biobank in the Norwegian Mother and Child Cohort Study | Biobanken i den norske mor og barn undersøkelsen
Norsk Epidemiologi, 16(1), 59–62. http://www.scopus.com/inward/record.url?eid=2-s2.0-33644958761&partnerID=MN8TOARS
Contributors: K. Rønningen, L. Paltiel, H. Meltzer, R. Nordhagen, K. Lie, R. Hovengen, M. Haugen, W. Nystad, J. Hoppin , P. Magnus
Source: ORCID
Added: September 13, 2019
2006 journal article
The biobank of the Norwegian mother and child cohort Study: A resource for the next 100 years
European Journal of Epidemiology, 21(8), 619–625.
Contributors: K. Rønningen *, L. Paltiel*, H. Meltzer *, R. Nordhagen*, K. Lie*, R. Hovengen*, M. Haugen*, W. Nystad *, P. Magnus *, J. Hoppin*
author keywords: automation; biobank; Birth Cohort Study; DNA; plasma; quality control
MeSH headings : Adult; Automation; Biological Specimen Banks / standards; Blood Banks; Child; Child, Preschool; Cohort Studies; Cryopreservation; DNA / isolation & purification; Female; Humans; Infant; Infant, Newborn; Mothers; Norway; Pregnancy; Pregnancy Outcome; Quality Control; Specimen Handling; Temperature; Urine
TL;DR:
With the unique combination of biological specimens and questionnaire data, the MoBa Study will constitute a resource for many future investigations of the separate and combined effects of genetic, environmental factors on pregnancy outcome and on human morbidity, mortality and health in general.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(OpenAlex)
Sources: ORCID, Crossref
Added: September 13, 2019
2006 journal article
Pesticide Exposure and Timing of Menopause
American Journal of Epidemiology, 163(8), 731–742.
Contributors: S. Farr, J. Cai, D. Savitz, D. Sandler, J. Hoppin* & G. Cooper
author keywords: agriculture; endocrine disruptors; fertility; hormone antagonists; hormones; menopause; ovary; pesticides
MeSH headings : Adult; Age Factors; Agricultural Workers' Diseases / chemically induced; Agricultural Workers' Diseases / epidemiology; Female; Humans; Interviews as Topic; Iowa / epidemiology; Menstruation Disturbances / chemically induced; Menstruation Disturbances / epidemiology; Middle Aged; North Carolina / epidemiology; Occupational Exposure / adverse effects; Pesticides / toxicity; Proportional Hazards Models; Surveys and Questionnaires
TL;DR:
Pesticide use may be associated with a later age at menopause, and after control for age, smoking status, and past use of oral contraceptives, the median time toMenopause increased by approximately 3 months for women who used pesticides.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(OpenAlex)
Sources: ORCID, Crossref
Added: September 13, 2019
2006 journal article
Induction of Asthma and the Environment: What We Know and Need to Know
Environmental Health Perspectives, 114(4), 615–619.
Contributors: M. Selgrade*, R. Lemanske Jr., M. Gilmour *, L. Neas *, M. Ward*, P. Henneberger *, D. Weissman *, J. Hoppin*
author keywords: air pollution; allergy; asthma economic impact; asthma induction; asthma prevalence; biologics; indoor environment; occupational exposure; public health; susceptibility
MeSH headings : Adolescent; Adult; Asthma / etiology; Asthma / genetics; Child; Child, Preschool; Environmental Exposure; Genetic Predisposition to Disease; Humans; Middle Aged; Needs Assessment; Occupational Diseases / etiology; Public Health; Research
TL;DR:
Seven working groups that focus on ambient air, indoor pollutants (biologics), occupational exposures, early life stages, older adults, intrinsic susceptibility, and lifestyle find strong scientific support for public health efforts to limit in utero and postnatal exposure to cigarette smoke.
(via Semantic Scholar)
Sources: ORCID, Crossref
Added: September 13, 2019
2006 journal article
Pendimethalin Exposure and Cancer Incidence Among Pesticide Applicators
Epidemiology, 17(3), 302–307.
Contributors: L. Hou *, J. Won *, J. Rusiecki *, J. Hoppin* , A. Blair*, M. Bonner *, J. Lubin*, C. Samanic*
MeSH headings : Adult; Aniline Compounds / poisoning; Cohort Studies; Environmental Exposure / analysis; Female; Humans; Iowa / epidemiology; Male; Middle Aged; Neoplasms / epidemiology; North Carolina / epidemiology; Prospective Studies; Surveys and Questionnaires
TL;DR:
Overall cancer incidence did not increase with increasing lifetime pendimethalin use, and there was no clear evidence of an association between pendimethelin use and risks for specific cancers, either with overall cancer incidence or with specific cancer sites.
(via Semantic Scholar)
Sources: ORCID, Crossref
Added: September 13, 2019
2006 journal article
Impact of urine preservation methods and duration of storage on measured levels of environmental contaminants
Journal of Exposure Science and Environmental Epidemiology, 16(1), 39–48.
Contributors: J. Hoppin* , R. Ulmer*, A. Calafat *, D. Barr *, S. Baker*, H. Meltzer *, K. Rønningen *
Source: ORCID
Added: September 13, 2019
2006 journal article
Pesticides associated with Wheeze among Commercial Pesticide Applicators in the Agricultural Health Study
American Journal of Epidemiology, 163(12), 1129–1137.
Contributors: J. Hoppin* , D. Umbach, S. London, C. Lynch, M. Alavanja & D. Sandler
author keywords: agriculture; insecticides; occupational exposure; organophosphates; pesticides; signs and symptoms; respiratory; sulfonylurea compounds
MeSH headings : Adolescent; Adult; Aged; Aged, 80 and over; Chi-Square Distribution; Cross-Sectional Studies; Dose-Response Relationship, Drug; Female; Humans; Iowa / epidemiology; Male; Middle Aged; Occupational Exposure / adverse effects; Organophosphorus Compounds / adverse effects; Pesticides / adverse effects; Pyrimidines / adverse effects; Respiratory Sounds; Risk Factors; Sulfonylurea Compounds / adverse effects
TL;DR:
The results add to the emerging literature linking organophosphate insecticides and respiratory health and suggest a role for chlorimuron-ethyl.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(OpenAlex)
Sources: ORCID, Crossref
Added: September 13, 2019
2006 journal article
Fertility and exposure to solvents among families in the Agricultural Health Study
Occupational and Environmental Medicine, 63(7), 469–475.
Contributors: M. Sallmén*, D. Baird, J. Hoppin* , A. Blair & D. Sandler
MeSH headings : Adult; Agricultural Workers' Diseases / chemically induced; Cross-Sectional Studies; Female; Finland; Humans; Infertility / chemically induced; Male; Middle Aged; Occupational Exposure / adverse effects; Odds Ratio; Regression Analysis; Risk Factors; Solvents / toxicity
TL;DR:
Investigating the impact of solvent exposure on subfertility among families of male licensed pesticide applicators in the Agricultural Health Study cohort found solvents may impair fertility of either gender, though the evidence for female effects is stronger than for male effects.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(OpenAlex)
Sources: ORCID, Crossref
Added: September 13, 2019
2006 journal article
Phorate Exposure and Incidence of Cancer in the Agricultural Health Study
Environmental Health Perspectives, 114(8), 1205–1209.
Contributors: R. Mahajan*, M. Bonner *, J. Hoppin* & M. Alavanja*
author keywords: agriculture; insecticides; neoplasms; occupational exposure; organophosphorus compounds; organothiophosphorus compounds; pesticides; prostate; phorate
MeSH headings : Adult; Aged; Agricultural Workers' Diseases / epidemiology; Alcohol Drinking / epidemiology; Cohort Studies; Follow-Up Studies; Humans; Insecticides / adverse effects; Insecticides / analysis; Iowa / epidemiology; Male; Middle Aged; North Carolina / epidemiology; Occupational Exposure / adverse effects; Phorate / adverse effects; Phorate / analysis; Prostatic Neoplasms / epidemiology; Socioeconomic Factors; Surveys and Questionnaires; Zea mays
TL;DR:
The observed statistical interaction suggests a gene–environment interaction between family history and phorate exposure in the incidence of prostate cancer, but other explanations are also possible.
(via Semantic Scholar)
Sources: ORCID, Crossref
Added: September 13, 2019
2006 journal article
Pesticides and Adult Respiratory Outcomes in the Agricultural Health Study
Annals of the New York Academy of Sciences, 1076(1), 343–354.
Contributors: J. Hoppin* , D. Umbach *, S. London *, C. Lynch *, M. Alavanja* & D. Sandler *
author keywords: farmers; occupational exposure; organophosphates; pesticide applicators
MeSH headings : Adult; Agriculture; Animals; Female; Humans; Male; Middle Aged; Pesticides / toxicity; Respiratory Tract Diseases / chemically induced
TL;DR:
The results of the wheeze study are consistent with recent animal models that support a role for organophosphates and respiratory outcomes, and are also consistent with the results of previous studies on grain and animal exposures.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(OpenAlex)
Sources: ORCID, Crossref
Added: September 13, 2019
2006 journal article
Reduced Fertility Among Overweight and Obese Men
Epidemiology, 17(5), 520–523.
Contributors: M. Sallmén, D. Sandler, J. Hoppin* , A. Blair & D. Baird
MeSH headings : Adult; Agriculture / statistics & numerical data; Body Mass Index; Epidemiologic Studies; Humans; Infertility, Male / epidemiology; Infertility, Male / etiology; Iowa / epidemiology; Male; Middle Aged; North Carolina / epidemiology; Obesity / epidemiology; Odds Ratio; United States / epidemiology
TL;DR:
There was a dose–response relationship, and the BMI effect was stronger when the data were limited to couples with the highest-quality infertility data, suggesting that erectile dysfunction in older men does not explain the association.
(via Semantic Scholar)
Sources: ORCID, Crossref
Added: September 13, 2019
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