Works Published in 2007
Displaying works 61 - 80 of 94 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2007 journal article
Exploratory Visual Analysis of statistical results from microarray experiments comparing high and low grade glioma.
Cancer Informatics, 5, 19–24. http://europepmc.org/abstract/med/19390666
Contributors: D. Reif , M. Israel & J. Moore
Source: ORCID
Added: May 14, 2019
2007 journal article
Evaporative cooling feature selection for genotypic data involving interactions.
Bioinformatics, 23(16), 2113–2120.
Contributors: B. McKinney *, D. Reif* , B. White*, J. Crowe Jr. & J. Moore *
MeSH headings : Base Sequence; Chromosome Mapping / methods; Computer Simulation; DNA Mutational Analysis / methods; Databases, Genetic; Evolution, Molecular; Genotype; Models, Genetic; Models, Statistical; Molecular Sequence Data; Sequence Analysis, DNA / methods
TL;DR:
An evaporative cooling feature selection algorithm that seeks to obtain a subset of attributes that contain DNA sequence variations associated with a given phenotype, and is able to identify functional sequence variations that involve interactions between other sequence variation that influence their association with the phenotype.
(via Semantic Scholar)
academic.oup.com (publisher PDF)
Source: ORCID
Added: May 14, 2019
2007 journal article
Details of the structure determination of the sulfated steroids PSDS and PADS: New components of the sea lamprey (Petromyzon marinus) migratory pheromone
Journal of Organic Chemistry, 72(20), 7544–7550.
Sources: NC State University Libraries, ORCID
Added: August 6, 2018
2007 journal article
A highly efficient approach to the self-assembly of hexagonal cavity-cored tris[2]pseudorotaxanes from several components via multiple noncovalent interactions
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 129(46), 14187-+.
MeSH headings : Crystallography, X-Ray; Magnetic Resonance Spectroscopy; Models, Chemical; Organoplatinum Compounds / chemistry; Rotaxanes / chemical synthesis; Spectrometry, Mass, Electrospray Ionization
TL;DR:
This methodology demonstrates the power of orthogonal self-assembly and may be expanded beyond the use of two recognition motifs in hopes of mimicking the complex multifunctionality of biological systems.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 journal article
Probing the mechanisms of an air amplifier using a LTQ-FT-ICR-MS and fluorescence spectroscopy
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 18(11), 1909–1913.
MeSH headings : Air; Amplifiers, Electronic; Cyclotrons; Fluorescent Dyes / chemistry; Spectrometry, Fluorescence / instrumentation; Spectrometry, Fluorescence / methods; Spectrometry, Mass, Electrospray Ionization / instrumentation; Spectrometry, Mass, Electrospray Ionization / methods; Spectroscopy, Fourier Transform Infrared / instrumentation; Spectroscopy, Fourier Transform Infrared / methods
TL;DR:
Experimental results provide direct evidence of aerodynamic focusing of electrosprayed droplets/ions enabled by an air amplifier, resulting in improved Electrospray droplet/ion capture efficiency and reduced ion injection time.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 journal article
Parallel performance modeling using a genetic programming-based error correction procedure
SIMULATION-TRANSACTIONS OF THE SOCIETY FOR MODELING AND SIMULATION INTERNATIONAL, 83(7), 515–527.
author keywords: error correction procedure; genetic programming; performance modeling
TL;DR:
This approach uses a systematic model error-correction procedure that uses evolutionary algorithms to find an error correction term to augment the eXisting model and shows that it adequately captures machine dependent characteristics.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
9. Industry, Innovation and Infrastructure
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 article
Immunoglobulin variable regions in molecules exhibiting characteristics of innate and adaptive immune receptors
IMMUNOLOGIC RESEARCH, Vol. 38, pp. 294–304.
MeSH headings : Animals; Chitin / chemistry; Fishes / immunology; Immunity, Innate; Immunoglobulin Variable Region / chemistry; Immunoglobulin Variable Region / classification; Phylogeny; Protein Structure, Tertiary; Receptors, Immunologic / chemistry; Receptors, Immunologic / classification
TL;DR:
The laboratory has discovered two families of molecules, the novel immune-type receptors and the variable region-containing chitin-binding proteins, that share some characteristics of adaptive immune receptors but likely mediate innate functions.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 journal article
Dual electrospray ion source for electron-transfer dissociation on a hybrid linear ion trap-orbitrap mass spectrometer
ANALYTICAL CHEMISTRY, 79(20), 7916–7919.
MeSH headings : Electrons; Ions; Molecular Structure; Spectrometry, Mass, Electrospray Ionization / instrumentation; Spectrometry, Mass, Electrospray Ionization / methods
TL;DR:
The stability of the ETD anion population is demonstrated and the ability to identify several c- and z-type product ions from multiply protonated peptide cations is demonstrated.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 journal article
Closure to "Optimal design of redundant water distribution networks using a cluster of workstations" by Sujay V. Kumar, Troy A. Doby, John W. Baugh Jr., E. Downey Brill, and S. Ranji Ranjithan
Journal of Water Resources Planning and Management, 133(6), 580–581.
UN Sustainable Development Goal Categories
6. Clean Water and Sanitation
(Web of Science; OpenAlex)
Sources: NC State University Libraries, ORCID
Added: August 6, 2018
2007 journal article
Carbohydrate analysis by desorption electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry
ANALYTICAL CHEMISTRY, 79(22), 8812–8815.
MeSH headings : Carbohydrates / analysis; Cyclotrons; Fourier Analysis; Spectrometry, Mass, Electrospray Ionization / methods
TL;DR:
G glycans from mucin are identified by using the high mass measurement accuracy and tandem MS capabilities afforded by the hybrid FT-ICR-MS platform.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 journal article
Cadmium ecophysiology in seven stonefly (Plecoptera) species: Delineating sources and estimating susceptibility
Environmental Science & Technology, 41(20), 7171–7177.
Source: NC State University Libraries
Added: August 6, 2018
2007 journal article
The zebrafish activating immune receptor Nitr9 signals via Dap12
Immunogenetics, 59(10), 813–821.
author keywords: natural cytotoxicity; DAP10; ERK; AKT; DAP12; NITR
MeSH headings : Adaptor Proteins, Signal Transducing / genetics; Adaptor Proteins, Signal Transducing / immunology; Adaptor Proteins, Signal Transducing / metabolism; Amino Acid Sequence; Animals; Cell Line; Humans; Molecular Sequence Data; Phosphorylation; Receptors, KIR / genetics; Receptors, KIR / immunology; Receptors, KIR / metabolism; Recombinant Proteins / immunology; Recombinant Proteins / metabolism; Sequence Alignment; Signal Transduction / immunology; Zebrafish; Zebrafish Proteins / genetics; Zebrafish Proteins / immunology; Zebrafish Proteins / metabolism
TL;DR:
Cross-linking the Nitr9L–Dap12 complex results in activation of the phosphytidylinositol 3-kinase→AKT→extracellular signal-regulated kinase pathway suggesting that the DAP12-based activating pathway is conserved between bony fish and mammals.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
14. Life Below Water
(OpenAlex)
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018
2007 journal article
Structural characteristics of zebrafish orthologs of adaptor molecules that associate with transmembrane immune receptors
Gene, 401(1-2), 154–164.
author keywords: DAP10; DAP12; FcR gamma; CD3 zeta
MeSH headings : Adaptor Proteins, Signal Transducing / chemistry; Adaptor Proteins, Signal Transducing / genetics; Adaptor Proteins, Signal Transducing / metabolism; Amino Acid Sequence; Animals; CD3 Complex / genetics; CD3 Complex / metabolism; Cell Lineage; Cell Membrane / immunology; Cell Membrane / metabolism; Cloning, Molecular; DNA, Complementary; Embryo, Nonmammalian; Gene Expression Regulation, Developmental; Genome; Killer Cells, Natural / immunology; Molecular Sequence Data; Phylogeny; Protein Structure, Tertiary; Receptors, IgG / immunology; Receptors, Immunologic / chemistry; Receptors, Immunologic / genetics; Receptors, Immunologic / metabolism; Receptors, KIR; Sequence Homology, Amino Acid; Zebrafish / embryology; Zebrafish / genetics; Zebrafish Proteins
TL;DR:
In an effort to understand developmental aspects of immune receptor function, the partially annotated zebrafish genome is accessed to identify six different adaptor molecules that are homologous to those effecting immune function in mammals.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018
2007 journal article
Remote mass spectrometric sampling of electrospray- and desorption electrospra-generated ions using an air ejector
Journal of the American Society for Mass Spectrometry, 18(10), 1844–1847.
Sources: NC State University Libraries, ORCID
Added: August 6, 2018
2007 journal article
Quantitative comparison of a flared and a standard heated metal capillary inlet with a voltage-assisted air amplifier on an electrospray ionization linear ion trap mass spectrometer
RAPID COMMUNICATIONS IN MASS SPECTROMETRY, 21(19), 3207–3212.
MeSH headings : Air; Amplifiers, Electronic; Capillary Action; Electromagnetic Phenomena / instrumentation; Equipment Design; Equipment Failure Analysis; Flow Injection Analysis / instrumentation; Flow Injection Analysis / methods; Formates / analysis; Heating / instrumentation; Melitten / analysis; Microfluidics / instrumentation; Reproducibility of Results; Sensitivity and Specificity; Spectrometry, Mass, Electrospray Ionization / instrumentation
TL;DR:
The performance characteristics of a flared and blunt-ended heated metal capillary were evaluated with a voltage-assisted air amplifier on a linear ion trap mass spectrometer and demonstrated that a standard capillary afforded higher ion abundance than a flared capillary.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 journal article
Development of quantitative real-time PCR assays for detection and quantification of surrogate biological warfare agents in building debris and leachate
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 73(20), 6557–6565.
MeSH headings : Bacillus / genetics; Bacillus / isolation & purification; Bacillus / physiology; Benzothiazoles; Biological Warfare Agents; Construction Materials / microbiology; DNA, Bacterial / analysis; DNA, Bacterial / isolation & purification; DNA, Ribosomal Spacer / analysis; Diamines; Organic Chemicals; Polymerase Chain Reaction / methods; Quinolines; RNA, Ribosomal, 16S / genetics; RNA, Ribosomal, 23S / genetics; Rec A Recombinases / genetics; Sensitivity and Specificity; Serratia marcescens / genetics; Serratia marcescens / isolation & purification; Soil Microbiology; Spores, Bacterial / isolation & purification; Waste Disposal, Fluid / methods
TL;DR:
The developed Q-PCR assays are highly specific and sensitive and can be used for monitoring the fate and transport of the BW surrogates B. atrophaeus and S. marcescens in building debris and leachate.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 journal article
Differential protein expression in male and female human lumbar cerebrospinal fluid using iTRAQ reagents after abundant protein depletion
PROTEOMICS, 7(20), 3726–3734.
author keywords: ceruloplasmin; ferroxidase; gender; low-abundance protein; mass spectrometry
MeSH headings : Adult; Aged; Biomarkers / analysis; Biomarkers / metabolism; Cerebrospinal Fluid Proteins / analysis; Cerebrospinal Fluid Proteins / metabolism; Female; Humans; Indicators and Reagents; Lumbosacral Region; Male; Middle Aged; Proteome / analysis; Proteome / metabolism
TL;DR:
This study examined the differential expression of proteins in pooled male and female CSF utilizing isobaric tags for relative and absolute quantification (iTRAQ™) reagents after the depletion of six high abundant proteins using a multiple affinity removal system (MARS).
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 journal article
Evolutionary computation-based approach for model error correction and calibration
ADVANCES IN WATER RESOURCES, 30(5), 1360–1370.
author keywords: evolutionary computation; calibration; model error correction; genetic programming
TL;DR:
A new approach is presented that addresses both parameter error and model structural error to improve the predictive capabilities of a model and can be applied to a broad array of mechanistic models.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
6. Clean Water and Sanitation
(Web of Science; OpenAlex)
13. Climate Action
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 journal article
Achieving augmented limits of detection for peptides with hydrophobic alkyl tags
ANALYTICAL CHEMISTRY, 79(11), 3989–3995.
MeSH headings : Acetates / chemistry; Alkylation; Amides / chemical synthesis; Amides / chemistry; Amino Acid Sequence; Chlorides / chemistry; Hydrophobic and Hydrophilic Interactions; Iodine / chemistry; Molecular Sequence Data; Peptides / analysis; Peptides / chemistry; Sensitivity and Specificity; Spectrometry, Mass, Electrospray Ionization; Tandem Mass Spectrometry
TL;DR:
The results demonstrate the feasibility of the octylcarboxyamidomethyl modification to improve limits of detection for cysteine-containing peptides with hydrophobic alkyl tags.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2007 journal article
Shear strength parameters of municipal solid waste with leachate recirculation
Journal of Geotechnical and Geoenvironmental Engineering, 133(4), 478–484.
UN Sustainable Development Goal Categories
11. Sustainable Cities and Communities
(Web of Science)
12. Responsible Consumption and Production
(Web of Science)
Sources: NC State University Libraries, ORCID
Added: August 6, 2018
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