Works Published in 2013
Displaying works 61 - 80 of 90 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2013 article
Special Issue on the Role of Systems Analysis in Watershed Management
Cai, X., Vogel, R., & Ranjithan, R. (2013, September). JOURNAL OF WATER RESOURCES PLANNING AND MANAGEMENT, Vol. 139, pp. 461–463.
TL;DR:
This special issue is expected to serve the water resources management and planning community by highlighting the current state of some innovative research findings relating to applications of systems methods for solving various watershed management modeling problems.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
6. Clean Water and Sanitation
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018
2013 journal article
Decomposition of forest products buried in landfills
WASTE MANAGEMENT, 33(11), 2267–2276.
author keywords: Landfills; Municipal solid waste; Forest products; Anaerobic decomposition; Biogenic carbon storage
MeSH headings : Waste Management; Wood / chemistry
TL;DR:
These results, in general, correlated well with an earlier laboratory-scale study, though NP and CC decomposition measured in this study were higher than previously reported.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
11. Sustainable Cities and Communities
(Web of Science)
12. Responsible Consumption and Production
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
A CTD-Pfizer collaboration: manual curation of 88 000 scientific articles text mined for drug-disease and drug-phenotype interactions
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION.
MeSH headings : Cooperative Behavior; Data Mining; Databases, Factual; Disease; Drug Industry; Humans; Pharmaceutical Preparations / metabolism; Phenotype; Publications; Toxicogenetics
TL;DR:
A collaboration between safety researchers at Pfizer and the research team at the Comparative Toxicogenomics Database (CTD) to text mine and manually review a collection of 88 629 articles relating over 1 200 pharmaceutical drugs to their potential involvement in cardiovascular, neurological, renal and hepatic toxicity.
(via Semantic Scholar)
academic.oup.com (publisher PDF)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
The Outer Loop bioreactor: A case study of settlement monitoring and solids decomposition
WASTE MANAGEMENT, 33(10), 2035–2047.
author keywords: Bioreactor landfill; Settlement; Solid decomposition; Leachate recirculation
TL;DR:
Results suggest that liquid recirculation in the Retrofit cells caused a 5-8% reduction in the thickness of the waste column, consistent with the concept that bioreactor operations accelerate the rate of decomposition, but not necessarily the cumulative loss of anaerobically degradable solids.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
11. Sustainable Cities and Communities
(Web of Science)
12. Responsible Consumption and Production
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
Measurement of carbon storage in landfills from the biogenic carbon content of excavated waste samples
WASTE MANAGEMENT, 33(10), 2001–2005.
author keywords: Landfill; Carbon storage; Municipal solid waste
MeSH headings : Biodegradation, Environmental; Carbon / analysis; Cellulose / metabolism; Kentucky; Lignin / metabolism; Methane / metabolism; North Carolina; Polysaccharides / metabolism; Refuse Disposal / methods; Waste Disposal Facilities
TL;DR:
The fraction of biogenic carbon that is not reactive in the landfill environment and therefore stored was derived for samples of excavated waste by measurement of the total organic carbon, its biogenic fraction, and the remaining methane potential.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
11. Sustainable Cities and Communities
(Web of Science)
12. Responsible Consumption and Production
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018
2013 journal article
Mass Recalibration of FT-ICR Mass Spectrometry Imaging Data Using the Average Frequency Shift of Ambient Ions
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 24(7), 1137–1145.
author keywords: Mass spectrometry imaging; FT-ICR MS; Mass calibration; MALDESI; MMA
MeSH headings : Animals; Brain / anatomy & histology; Brain Chemistry; Calibration; Cyclotrons; Fourier Analysis; Infrared Rays; Ions; Mass Spectrometry / methods; Mass Spectrometry / statistics & numerical data; Mice; Molecular Imaging / methods; Molecular Imaging / statistics & numerical data; Spectrometry, Mass, Electrospray Ionization / methods; Spectrometry, Mass, Electrospray Ionization / statistics & numerical data; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization / methods; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization / statistics & numerical data
TL;DR:
A calibration method is applied based on the observed cyclotron frequency shift of ions found in the ambient laboratory environment, polydimethylcyclosiloxanes (PDMS) to achieve part per billion mass accuracy with relatively high precision for an infrared matrix-assisted laser desorption electrospray ionization (IR-MALDESI) MSI dataset.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
Liquid balance monitoring inside conventional, Retrofit, and bio-reactor landfill cells
WASTE MANAGEMENT, 33(10), 2006–2014.
author keywords: Landfill; Bioreactor; Leachate; Recirculation; Liquid balance
MeSH headings : Biodegradation, Environmental; Bioreactors; Kentucky; Refuse Disposal / instrumentation; Solid Waste / analysis; Waste Disposal Facilities; Water / analysis; Water Pollutants, Chemical
TL;DR:
The increase in net liquid volume in the As-Built cells indicates that the 37% (average) measured settlement strain in these cells cannot be due to consolidation as the waste mass did not lose any moisture but rather suggests that settlement was attributable to lubrication of waste particle contacts, softening of flexible porous materials, and additional biological degradation.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
11. Sustainable Cities and Communities
(Web of Science)
12. Responsible Consumption and Production
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018
2013 journal article
Analysis of an intronic promoter within Synj2
Biochemical and Biophysical Research Communications, 440(4), 640–645.
Contributors: A. Planchart n
author keywords: Synaptojanin; Inositol polyphosphate phosphatase; Spermatogenesis; Non-canonical promoter; Mouse
MeSH headings : 5' Untranslated Regions; Animals; Introns; Male; Mice; Mice, Inbred BALB C; Nerve Tissue Proteins / genetics; Phosphoric Monoester Hydrolases / genetics; Promoter Regions, Genetic; Spermatogenesis / genetics; Transcription, Genetic
TL;DR:
A novel subset of transcripts appears to derive from a region located within intron 7 of Synj2 that manifest developmental stage specificity and somatic versus gametic differences in expression.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018
2013 journal article
Super Resolution Microscopy Reveals that Caveolin-1 Is Required for Spatial Organization of CRFB1 and Subsequent Antiviral Signaling in Zebrafish
PLoS ONE, 8(7), e68759.
Ed(s): C. Lamaze
MeSH headings : Animals; Caveolin 1 / metabolism; Cell Membrane / metabolism; Disease Resistance / immunology; Fish Diseases / immunology; Fish Diseases / metabolism; Fish Diseases / virology; Immunity, Innate / genetics; Interferons / metabolism; Protein Binding; Receptors, Interferon / metabolism; Signal Transduction; Zebrafish / immunology; Zebrafish / metabolism; Zebrafish / virology; Zebrafish Proteins / metabolism
TL;DR:
This response strongly suggests that CRFB1 organization within cav-1b-containing membrane domains is critical for IFN-mediated antiviral defense and presents a previously undescribed antiviral evasion strategy to alter IFN signaling and the antiviral immune response.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018
2013 journal article
Individuality Normalization when Labeling with Isotopic Glycan Hydrazide Tags (INLIGHT): A Novel Glycan-Relative Quantification Strategy
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 24(9), 1376–1384.
author keywords: Glycomics; Hydrazide Reagents; Stable Isotope Labeling; Normalization; Hydrazone; Formation; Relative Quantification; N-Linked Glycans
MeSH headings : Chromatography, Reverse-Phase; Glycomics / methods; Glycoproteins / chemistry; Glycosylation; Humans; Isotope Labeling / methods; Mass Spectrometry / methods; Plasma / chemistry; Polysaccharides / analysis; Polysaccharides / isolation & purification
TL;DR:
The ability to spike in a glycoprotein and detect change at the glycan level validates both the sample preparation and data analysis strategy, making INLIGHT an invaluable relative quantification strategy for the field of glycomics.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
Factorial Experimental Designs Elucidate Significant Variables Affecting Data Acquisition on a Quadrupole Orbitrap Mass Spectrometer
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 24(10), 1501–1512.
author keywords: Design of experiments; Data dependent acquisition; Proteome coverage; Q Exactive; FTMS
MeSH headings : Models, Chemical; Proteome / analysis; Proteome / chemistry; Proteomics / methods; Research Design; Saccharomyces cerevisiae Proteins / analysis; Saccharomyces cerevisiae Proteins / chemistry; Tandem Mass Spectrometry / methods
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
Anchoring Hepatic Gene Expression with Development of Fibrosis and Neoplasia in a Toxicant-induced Fish Model of Liver Injury
TOXICOLOGIC PATHOLOGY, 41(5), 744–760.
author keywords: dimethylnitrosamine; liver; fibrosis; neoplasia; medaka; Oryzias latipes; gene expression
MeSH headings : Animals; Chemical and Drug Induced Liver Injury / etiology; Chemical and Drug Induced Liver Injury / genetics; Chemical and Drug Induced Liver Injury / metabolism; Chemical and Drug Induced Liver Injury / pathology; Dimethylnitrosamine / toxicity; Disease Models, Animal; Female; Fish Proteins / chemistry; Fish Proteins / genetics; Fish Proteins / metabolism; Gene Expression; Immunohistochemistry; Liver / drug effects; Liver / metabolism; Liver / pathology; Liver Cirrhosis / chemically induced; Liver Cirrhosis / genetics; Liver Cirrhosis / metabolism; Liver Cirrhosis / pathology; Male; Microscopy, Electron, Transmission; Oryzias; Phenotype
TL;DR:
This study identified a group of candidate genes likely to be involved in the development of hepatic fibrosis and demonstrated that the TGF-β pathway likely plays a major role in the pathogenesis.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
Evolutionary Patterns in Trace Metal (Cd and Zn) Efflux Capacity in Aquatic Organisms
ENVIRONMENTAL SCIENCE & TECHNOLOGY, 47(14), 7989–7995.
MeSH headings : Animals; Cadmium / metabolism; Insecta / metabolism; Trace Elements / metabolism; Water Pollutants, Chemical / metabolism; Zinc / metabolism
TL;DR:
A broader, comparative analysis of Cd and Zn ke values from existing data for arthropods, mollusks, annelids, and chordates and found significant phylogenetic patterns, suggesting that some groups are more constrained than others in their abilities to eliminate metals.
(via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018
2013 journal article
Development of a simultaneous search-based pilot point method for subsurface characterization
STOCHASTIC ENVIRONMENTAL RESEARCH AND RISK ASSESSMENT, 27(8), 2003–2013.
author keywords: Hydraulic conductivity; SSBM; DBM; Global optimization
UN Sustainable Development Goal Categories
6. Clean Water and Sanitation
(Web of Science)
13. Climate Action
(OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018
2013 journal article
Bioconcentration and Biotransformation of Selenite versus Selenate Exposed Periphyton and Subsequent Toxicity to the Mayfly Centroptilum triangulifer
ENVIRONMENTAL SCIENCE & TECHNOLOGY, 47(14), 7965–7973.
MeSH headings : Animals; Insecta / drug effects; Insecta / metabolism; Selenic Acid / metabolism; Selenic Acid / toxicity; Selenious Acid / metabolism; Selenious Acid / toxicity
TL;DR:
Dissolved selenium speciation, residence time, and organisms at the base of aquatic food webs appear to be the principal determinants of Se bioaccumulation and toxicity.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2013 journal article
Regulation of phenylalanine ammonia-lyase (PAL) gene family in wood forming tissue of Populus trichocarpa
Planta, 238(3), 487–497.
MeSH headings : Gene Expression Regulation, Plant / physiology; Mass Spectrometry; Phenylalanine Ammonia-Lyase / metabolism; Populus / enzymology; Populus / metabolism
TL;DR:
A greater functional significance of subgroup A PtrPALs for stem wood formation is indicated, and the role of gene post-transcriptional regulation is highlighted.
(via Semantic Scholar)
Sources: NC State University Libraries, ORCID
Added: August 6, 2018
2013 journal article
Multi-peptide nLC-PC-IDMS-SRM-based Assay for the quantification of biomarkers in the chicken ovarian cancer model
METHODS, 61(3), 323–330.
author keywords: Proteomics; Quantification; Ovarian cancer; Chicken; Biomarkers
MeSH headings : Amino Acid Sequence; Animals; Biological Assay; Biomarkers, Tumor / analysis; Biomarkers, Tumor / blood; Biomarkers, Tumor / chemistry; Calibration; Carbon Isotopes; Chickens; Disease Models, Animal; Female; Humans; Indicator Dilution Techniques; Isotope Labeling; Molecular Sequence Data; Nitrogen Isotopes; Ovarian Neoplasms / chemistry; Ovarian Neoplasms / metabolism; Peptide Fragments / analysis; Prealbumin / analysis; Prealbumin / chemistry; Prealbumin / metabolism; Proteomics / methods; Proteomics / standards; Tandem Mass Spectrometry / methods; Tandem Mass Spectrometry / standards; Vitellogenins / analysis; Vitellogenins / blood; Vitellogenins / chemistry; alpha-Macroglobulins / analysis; alpha-Macroglobulins / chemistry; alpha-Macroglobulins / metabolism
TL;DR:
These data illustrate the successes and challenges of qualifying quantitative levels of proteins from an in-gel digestion sample preparation followed by LC-MS/MS (GeLC) label-free discovery-based approach to a targeted SRM-based quantitative assay in plasma and tissues.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science; OpenAlex)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
A Semantic Model for Species Description Applied to the Ensign Wasps (Hymenoptera: Evaniidae) of New Caledonia
SYSTEMATIC BIOLOGY, 62(5), 639–659.
author keywords: Biodiversity informatics; Evaniidae; New Caledonia; new species; ontology; semantic phenotypes; semantic species description; taxonomy
MeSH headings : Animals; Classification / methods; Models, Biological; New Caledonia; Semantics; Species Specificity; Wasps / anatomy & histology; Wasps / classification
TL;DR:
A revision of the ensign wasp (Hymenoptera: Evaniidae) fauna of New Caledonia is presented using this new model for species description, and a foundation to discuss limitations and potential benefits such as automated data integration and reasoner-driven queries is provided.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
Comparative Proteomic Analysis and IgE Binding Properties of Peanut Seed and Testa (Skin)
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 61(16), 3957–3968.
author keywords: IgE binding; LC-MS/MS; peanut; proteomics; skins; testae
MeSH headings : Allergens / immunology; Antigens, Plant / immunology; Arachis / chemistry; Arachis / immunology; Humans; Immunoglobulin E / metabolism; Peanut Hypersensitivity / immunology; Plant Proteins / analysis; Plant Proteins / chemistry; Plant Proteins / immunology; Proteomics; Seeds / chemistry; Seeds / immunology
TL;DR:
Findings indicate that peanut skins contain potentially allergenic proteins; however, the presence of phenolic compounds may attenuate this effect.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2013 journal article
Using observed data to improve estimated methane collection from select US landfills
Environmental Science & Technology, 47(7), 3251–3257.
MeSH headings : Gases / analysis; Kinetics; Methane / analysis; Models, Chemical; Public Policy; Rain; Statistics as Topic; Temperature; Uncertainty; United States; Waste Disposal Facilities
TL;DR:
The results suggest that the default k value assumed in LandGEM is likely too low, which implies that more methane is produced in the early years following waste burial when gas collection efficiencies tend to be lower.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
11. Sustainable Cities and Communities
(Web of Science)
12. Responsible Consumption and Production
(Web of Science)
Sources: NC State University Libraries, ORCID
Added: August 6, 2018
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