Works Published in 2008

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Displaying works 181 - 200 of 473 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2008 journal article

Improved feed protein fractionation schemes for formulating rations with the cornell net carbohydrate and protein system

Journal of Dairy Science, 91(12), 4881–4891.

By: C. Lanzas*, G. Broderick* & D. Fox*

Contributors: C. Lanzas*, G. Broderick* & D. Fox*

author keywords: feed protein fractionation; protein supply; nutritional model
MeSH headings : Animal Feed; Dietary Carbohydrates / analysis; Dietary Proteins / analysis; Dietary Proteins / metabolism; Food Technology / methods; Food Technology / standards
TL;DR: Evaluating the original Cornell Net Carbohydrate Protein System (CNCPS) protein fractionation scheme and developing and evaluating alternatives designed to improve its adequacy in predicting RDP and RUP concluded that implementing alternative 1 or 2 will improve the accuracy of predicting R DP and Rup within the CNCPS framework. (via Semantic Scholar)
Source: ORCID
Added: September 9, 2019

2008 journal article

Topographical characterization of cone photoreceptors and the area centralis of the canine retina

Molecular Vision, 14, 2518–2527.

By: F. Mowat, S. Petersen-Jones, H. Williamson, D. Williams, P. Luthert, R. Ali, J. Bainbridge

Source: NC State University Libraries
Added: September 8, 2019

2008 journal article

An Evaluation of Information Content as a Metric for the Inference of Putative Conserved Noncoding Regions in DNA Sequences Using a Genetic Algorithms Approach

IEEE/ACM Transactions on Computational Biology and Bioinformatics, 5(1), 1–14.

By: C. Bates Congdon*, J. Aman*, G. Nava*, H. Gaskins* & C. Mattingly*

author keywords: evolutionary computing; genetic algorithms; biology; genetics
MeSH headings : Algorithms; Animals; Base Sequence; Computational Biology / methods; Confidence Intervals; Conserved Sequence / genetics; Cystic Fibrosis Transmembrane Conductance Regulator / genetics; Enhancer Elements, Genetic / genetics; Glutathione Transferase / genetics; Humans; Models, Genetic; Regulatory Sequences, Nucleic Acid / genetics; Sequence Alignment; Sequence Analysis, DNA / methods; Sex-Determining Region Y Protein / genetics
TL;DR: Results indicate that IC does not identify highly conserved regions and, thus, is not the appropriate metric for this task, whereas variations on IC, as well as the original metric, succeed in identifying putative Conserved regions. (via Semantic Scholar)
Sources: Crossref, ORCID
Added: August 10, 2019

2008 journal article

The Comparative Toxicogenomics Database facilitates identification and understanding of chemical-gene-disease associations: arsenic as a case study

BMC Medical Genomics, 1(1).

By: A. Davis*, C. Murphy*, M. Rosenstein*, T. Wiegers* & C. Mattingly*

TL;DR: Analysis of curated data for the chemical arsenic provides insight into the biological functions and molecular networks affected by exposure to arsenic, including stress response, apoptosis, cell cycle, and specific protein signaling pathways. (via Semantic Scholar)
Sources: Crossref, ORCID
Added: August 10, 2019

2008 journal article

Statistical Methods for Mapping Multiple QTL

International Journal of Plant Genomics, 2008, 1–8.

TL;DR: This article focuses the discussion on the statistical methods for mapping multiple QTL by maximum likelihood and Bayesian methods and also on determining appropriate thresholds for the analysis. (via Semantic Scholar)
Source: Crossref
Added: July 20, 2019

2008 journal article

A combined transcriptome and proteome survey of malaria parasite liver stages

Proceedings of the National Academy of Sciences, 105(1), 305–310.

By: A. Tarun*, X. Peng*, R. Dumpit*, Y. Ogata*, H. Silva-Rivera*, N. Camargo*, T. Daly*, L. Bergman*, S. Kappe*

author keywords: drug targeting; fatty acid synthesis; Plasmodium
MeSH headings : Animals; Drug Design; Fatty Acids / metabolism; Gene Expression Regulation; Green Fluorescent Proteins / chemistry; Hepatocytes / parasitology; Humans; Liver / parasitology; Malaria / parasitology; Open Reading Frames; Plasmodium yoelii / metabolism; Proteome; Proteomics / methods; Transcription, Genetic
TL;DR: A comprehensive transcriptome analysis in combination with a proteomic survey of LS revealed exported parasite proteins and LS metabolic pathways including expression of FASII pathway enzymes and other pathways localized in the apicoplast as potential drug targets to prevent malaria infection. (via Semantic Scholar)
Sources: Crossref, ORCID
Added: July 20, 2019

2008 journal article

Assessment and improvement of the Plasmodium yoelii yoelii genome annotation through comparative analysis

Bioinformatics, 24(13), i383–i389.

By: A. Vaughan*, S. Chiu*, G. Ramasamy*, L. Li*, M. Gardner*, A. Tarun*, S. Kappe*, X. Peng*

MeSH headings : Algorithms; Animals; Chromosome Mapping / methods; Genome, Protozoan / genetics; Plasmodium yoelii / genetics; Reproducibility of Results; Sensitivity and Specificity; Sequence Alignment / methods; Sequence Analysis, DNA / methods
TL;DR: A systematic assessment of the accuracy of the genome annotation based on a detailed analysis of a comprehensive set of cDNA sequences and proteomics data found that the coverage of the current annotation tends to be biased toward genes expressed in the blood stages of the parasite life cycle. (via Semantic Scholar)
Sources: Crossref, ORCID
Added: July 20, 2019

2008 journal article

Distinct Malaria Parasite Sporozoites Reveal Transcriptional Changes That Cause Differential Tissue Infection Competence in the Mosquito Vector and Mammalian Host

Molecular and Cellular Biology, 28(20), 6196–6207.

By: S. Mikolajczak*, H. Silva-Rivera*, X. Peng*, A. Tarun*, N. Camargo*, V. Jacobs-Lorena*, T. Daly*, L. Bergman* ...

MeSH headings : Animals; Anopheles / parasitology; Gene Expression Profiling; Gene Expression Regulation; Gene Targeting; Genes, Protozoan; Hemolymph / cytology; Hemolymph / metabolism; Host-Parasite Interactions; Injections, Intravenous; Insect Vectors / parasitology; Malaria / genetics; Malaria / parasitology; Mammals / parasitology; Mice; Oocysts / cytology; Oocysts / metabolism; Parasites / cytology; Parasites / genetics; Parasites / pathogenicity; Plasmodium falciparum / genetics; Plasmodium yoelii / genetics; Protein Transport; Protozoan Proteins / genetics; Protozoan Proteins / metabolism; Salivary Glands / parasitology; Sporozoites / cytology; Sporozoites / metabolism; Transcription, Genetic
TL;DR: The UIS-UOS gene classification provides a framework to elucidate the infectivity and transmission success of Plasmodium sporozoites on a whole-genome scale and identify targets for vector-based transmission blocking strategies (UOS genes), as well as strategies that prevent mammalian host infection (UIS genes). (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Sources: Crossref, ORCID
Added: July 20, 2019

2008 journal article

A critical role for DAP10 and DAP12 in CD8+ T cell-mediated tissue damage in large granular lymphocyte leukemia

Blood, 113(14), 3226–3234.

By: X. Chen*, F. Bai*, L. Sokol*, J. Zhou*, A. Ren*, J. Painter*, J. Liu*, D. Sallman* ...

MeSH headings : Adaptor Proteins, Signal Transducing / genetics; Adaptor Proteins, Signal Transducing / metabolism; Adaptor Proteins, Signal Transducing / physiology; CD28 Antigens / metabolism; CD8-Positive T-Lymphocytes / immunology; CD8-Positive T-Lymphocytes / metabolism; CD8-Positive T-Lymphocytes / pathology; Cytotoxicity, Immunologic / genetics; Endothelial Cells / immunology; Endothelial Cells / pathology; Extracellular Signal-Regulated MAP Kinases / metabolism; Humans; K562 Cells; Leukemia, Large Granular Lymphocytic / genetics; Leukemia, Large Granular Lymphocytic / immunology; Leukemia, Large Granular Lymphocytic / metabolism; Leukemia, Large Granular Lymphocytic / pathology; Membrane Proteins / genetics; Membrane Proteins / metabolism; Membrane Proteins / physiology; Phosphatidylinositol 3-Kinases / metabolism; Pulmonary Artery / immunology; Pulmonary Artery / pathology; Receptors, Immunologic / genetics; Receptors, Immunologic / metabolism; Receptors, Immunologic / physiology; Receptors, Natural Killer Cell / metabolism; Signal Transduction / genetics; Tumor Cells, Cultured
TL;DR: Results shown suggest that inhibitors of DAP10 and DAP12 or other proteins involved in this signaling pathway will be attractive therapeutic targets for the treatment of LGLL and other autoimmune diseases and syndromes. (via Semantic Scholar)
Sources: ORCID, Crossref
Added: May 17, 2019

2008 journal article

Genetic basis for adverse events after smallpox vaccination (Journal of Infectious Diseases (2008) 198, (16-22))

Journal of Infectious Diseases, 198(5).

By: D. Reif, B. McKinney & A. Motsinger

Contributors: D. Reif, B. McKinney & A. Motsinger

UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Source: ORCID
Added: May 14, 2019

2008 journal article

Genetic Basis for Adverse Events after Smallpox Vaccination

The Journal of Infectious Diseases, 198(1), 16–22.

By: D. Reif*, B. McKinney*, A. Motsinger*, S. Chanock*, K. Edwards*, M. Rock*, J. Moore, J. Crowe, Jr.

Contributors: D. Reif*, B. McKinney*, A. Motsinger*, S. Chanock*, K. Edwards*, M. Rock*, J. Moore, J. Crowe Jr.

MeSH headings : Adult; Female; Genetic Predisposition to Disease; Genotype; Humans; Interferon Regulatory Factor-1 / genetics; Interleukin-4 / genetics; Male; Methylenetetrahydrofolate Reductase (NADPH2) / genetics; Polymorphism, Single Nucleotide; Smallpox Vaccine / adverse effects; Vaccination / adverse effects
TL;DR: Genetic polymorphisms in genes expressing an enzyme previously associated with adverse reactions to a variety of pharmacologic agents (MTHFR) and an immunological transcription factor (IRF1) were associated with AEs after smallpox vaccination in 2 independent study samples. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Sources: Crossref, ORCID
Added: May 14, 2019

2008 conference paper

A balanced accuracy fitness function leads to robust analysis using grammatical evolution neural networks in the case of class imbalance

Proceedings of the 10th annual conference on Genetic and evolutionary computation - GECCO '08, 353–354.

By: N. Hardison n, T. Fanelli*, S. Dudek*, D. Reif*, M. Ritchie* & A. Motsinger-Reif n

Contributors: N. Hardison n, D. Reif*, T. Fanelli*, M. Ritchie*, S. Dudek* & A. Motsinger-Reif n

TL;DR: It is shown that when using classification error, class imbalance greatly decreases the power of GENN, and balanced error has replaced classification error in the GENN algorithm. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Source: ORCID
Added: May 14, 2019

2008 journal article

pH Controlled Synthesis of High Aspect-Ratio Gold Nanorods

Journal of Nanoscience and Nanotechnology, 8(11), 5708–5714.

By: Q. Wei*, J. Ji & J. Shen

Contributors: Q. Wei*, J. Ji & J. Shen

author keywords: Gold Nanorods; High Aspect-Ratio; pH Control Synthesis; Seed Mediated; Slow Growth
TL;DR: The two-step synthesis of high aspect-ratio gold nanorods via combining low pH growth and higher cetyltrimethylammonium bromide concentration is reported, which could be excellent building blocks for optical or electrical nanodevices in future. (via Semantic Scholar)
Source: ORCID
Added: March 21, 2019

2008 journal article

Two-Photon Luminescence Imaging of Bacillus Spores Using Peptide-Functionalized Gold Nanorods

Nano Research, 1(6), 450–456.

By: W. He*, W. Henne*, Q. Wei*, Y. Zhao*, D. Doorneweerd*, J. Cheng*, P. Low*, A. Wei*

Contributors: W. He*, W. Henne*, Q. Wei*, Y. Zhao*, D. Doorneweerd*, J. Cheng*, P. Low*, A. Wei*

author keywords: Bionanotechnology; nanorods; nonlinear optics; pathogen detection; peptides
TL;DR: It was determined that gold nanorods functionalized with a cysteine-terminated homing peptide are capable of significant TPL output even when irradiated at near infrared wavelengths far from their longitudinal plasmon resonance (LPR), permitting considerable flexibility in the choice of GNR aspect ratio or excitation wavelength for TPL imaging. (via Semantic Scholar)
Source: ORCID
Added: March 21, 2019

2008 journal article

The Escherichia coli O157 : H7 DNA detection on a gold nanoparticle-enhanced piezoelectric biosensor

Chinese Science Bulletin, 53(8), 1175–1184.

By: L. Wang*, Q. Wei*, C. Wu*, Z. Hu*, J. Ji* & P. Wang*

Contributors: L. Wang*, Q. Wei*, C. Wu*, Z. Hu*, J. Ji* & P. Wang*

author keywords: piezoelectric biosensor; gold nanoparticle; E. coli O157 : H7
Source: ORCID
Added: March 21, 2019

2008 journal article

Synthesis of near-infrared responsive gold nanorod/PNIPAAm core/shell nanohybrids via surface initiated ATRP for smart drug delivery

Macromolecular Rapid Communications, 29(8), 645–650.

By: Q. Wei*, J. Ji* & J. Shen*

Contributors: Q. Wei*, J. Ji* & J. Shen*

author keywords: drug delivery systems; gold nanorods; nanocomposites; near infrared responsive; stimuli-sensitive polymers
TL;DR: Norvancomycin (NVan) loading and release experiments show that the drug release rate can be modulated by NIR irradiation, and such an intelligent drug-delivery system might find applications in non-invasive controlled drug release in future. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Source: ORCID
Added: March 21, 2019

2008 journal article

COLL 66-Gold nanostars with magnetic cores as dynamic optical imaging agents

Abstracts of Papers of the American Chemical Society, 236. http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=ORCID&SrcApp=OrcidOrg&DestLinkType=FullRecord&DestApp=WOS_CPL&KeyUT=WOS:000270256303742&KeyUID=WOS:000270256303742

By: Q. Wei, H. Song, Q. Ong, K. Ritchie & A. Wei

Contributors: Q. Wei, H. Song, Q. Ong, K. Ritchie & A. Wei

Source: ORCID
Added: March 21, 2019

2008 conference paper

Multiple disease resistance in interspecific-derived hybrid breeding lines

Proceedings of the American Peanut Research and Education Society, 40, 32–33.

By: S. Tallury, T. Isleib, J. Hollowell, W. Dong, S. Milla-Lewis, C. Holbrook, B. Shew

Source: NC State University Libraries
Added: February 23, 2019

2008 conference paper

SSR allelic diversity changes in Virginia-type peanut cultivars released from 1943 to 2006

Proceedings of the American Peanut Research and Education Society, 40, 35–36.

By: S. Milla-Lewis, M. Zuleta & T. Isleib

Source: NC State University Libraries
Added: February 23, 2019

2008 conference paper

DNA markers for resistance to post-harvest aflatoxin accumulation in peanut (Arachis hypogaea L.)

Proceedings of the American Peanut Research and Education Society, 40, 21–22.

By: C. Rowe, S. Milla-Lewis & T. Isleib

Source: NC State University Libraries
Added: February 23, 2019

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