Works Published in 2009

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Displaying works 281 - 300 of 511 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2009 book

Every living thing: Man's obsessive quest to catalog life, from nanobacteria to new monkeys

New York: Collins.

By: R. Dunn & E. Wilson

Source: NC State University Libraries
Added: August 6, 2018

2009 journal article

Aerial Dispersal and Multiple-Scale Spread of Epidemic Disease

ECOHEALTH, 6(4), 546–552.

By: C. Mundt*, K. Sackett*, L. Wallace*, C. Cowger n & J. Dudley*

author keywords: avian influenza H5N1; epidemiology; invasive species; long-distance dispersal (LDD); plant disease; West Nile virus (WNV)
MeSH headings : Air Microbiology; Animals; Birds / virology; Communicable Diseases, Emerging / epidemiology; Communicable Diseases, Emerging / transmission; Communicable Diseases, Emerging / virology; Disease Outbreaks; Disease Transmission, Infectious; Humans; Influenza in Birds / epidemiology; Influenza in Birds / transmission; Influenza in Birds / virology; Influenza, Human / epidemiology; Influenza, Human / transmission; Influenza, Human / virology; Models, Biological; Plant Diseases / microbiology; Space-Time Clustering; West Nile Fever / epidemiology; West Nile Fever / transmission; West Nile Fever / virology
TL;DR: A simple model of disease spread that incorporates logistic growth in time with an inverse power function for dispersal improves understanding of the geographic spread of emerging diseases, and facilitates the development of methods for predicting and preventing epidemics of plants, animals, and humans caused by pathogens that are capable of long-distance dispersal. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
3. Good Health and Well-being (OpenAlex)
13. Climate Action (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2009 journal article

Modeling the overpotential, particle size and strain dependence of phase transition pathways in battery electrodes: Example in nanoscale olivines

Chemistry of Materials, 21, 1557–1571.

By: M. Tang, H. Huang, N. Meethong, Y. Kao, W. Carter & Y. Chiang

Source: NC State University Libraries
Added: August 6, 2018

2009 journal article

Phylogenetic relationships of Ceratitis fruit flies inferred from nuclear CAD and tango/ARNT gene fragments: Testing monophyly of the subgenera Ceratitis (Ceratitis) and C. (Pterandrus)

MOLECULAR PHYLOGENETICS AND EVOLUTION, 53(2), 412–424.

By: N. Barr n & B. Wiegmann n

author keywords: tango; ARNT; CAD; Systematics; Ceratitis; PAS
MeSH headings : Amino Acid Sequence; Animals; Bayes Theorem; Cell Nucleus / genetics; Evolution, Molecular; Genes, Insect; Genetic Variation; Molecular Sequence Data; Phylogeny; Sequence Alignment; Sequence Analysis, DNA; Tephritidae / classification; Tephritidae / genetics
TL;DR: Results indicate that the CAD and tango genes provide useful phylogenetic signal within the taxa and are compatible with the previously studied genes. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2009 journal article

Phylogenetic analysis and temporal diversification of mosquitoes (Diptera: Culicidae) based on nuclear genes and morphology

BMC EVOLUTIONARY BIOLOGY, 9.

By: K. Reidenbach*, S. Cook*, M. Bertone n, R. Harbach*, B. Wiegmann n & N. Besansky*

MeSH headings : Animals; Cell Nucleus / genetics; Culicidae / anatomy & histology; Culicidae / classification; Culicidae / genetics; Evolution, Molecular; Phylogeny
TL;DR: The results support the notion of rapid radiations early in the diversification of mosquitoes, and suggest the need for additional taxonomic sampling. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2009 journal article

Morphogenesis of the Primitive Gut Tube Is Generated by Rho/ROCK/Myosin II-Mediated Endoderm Rearrangements

DEVELOPMENTAL DYNAMICS, 238(12), 3111–3125.

By: R. Reed n, M. Womble n, M. Dush n, R. Tull n, S. Bloom n, A. Morckel n, E. Devlin*, N. Nascone-Yoder n

author keywords: gut; Xenopus; morphogenesis; endoderm, intercalation; elongation
MeSH headings : Animals; Animals, Genetically Modified; Body Patterning / genetics; Cell Polarity / genetics; Cell Shape / genetics; Embryo, Nonmammalian; Endoderm / cytology; Endoderm / embryology; Endoderm / metabolism; Gastrointestinal Diseases / congenital; Gastrointestinal Diseases / embryology; Gastrointestinal Tract / abnormalities; Gastrointestinal Tract / embryology; Gastrula / embryology; Gastrula / metabolism; Models, Biological; Morphogenesis / genetics; Nonmuscle Myosin Type IIB / genetics; Nonmuscle Myosin Type IIB / metabolism; Nonmuscle Myosin Type IIB / physiology; Signal Transduction / genetics; Xenopus / embryology; Xenopus / genetics; Xenopus / metabolism; rho-Associated Kinases / genetics; rho-Associated Kinases / metabolism; rho-Associated Kinases / physiology; rhoA GTP-Binding Protein / genetics; rhoA GTP-Binding Protein / metabolism; rhoA GTP-Binding Protein / physiology
TL;DR: The results suggest that the cellular and molecular events driving tissue elongation in the PGT are mechanistically analogous to those that function during gastrulation, but occur within a novel cylindrical geometry to generate an epithelial‐lined tube. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2009 journal article

Molecular genetic description of the cryptic wheat-Aegilops geniculata introgression carrying rust resistance genes Lr57 and Yr40 using wheat ESTs and synteny with rice

GENOME, 52(12), 1025–1036.

By: V. Kuraparthy n, S. Sood n & B. Gill n

author keywords: wheat; rust resistance; alien introgression; comparative mapping; synteny
MeSH headings : Basidiomycota / growth & development; Breeding; Chromosome Mapping / methods; Chromosomes, Plant / genetics; DNA, Plant / genetics; Expressed Sequence Tags; Genome, Plant / genetics; Immunity, Innate / genetics; Oryza / genetics; Plant Diseases / genetics; Plant Diseases / microbiology; Poaceae / genetics; Polymorphism, Restriction Fragment Length; Synteny; Triticum / genetics
TL;DR: The small size of the terminal wheat-alien translocation, as established precisely with respect to Chinese Spring deletion bins and the syntenic rice genomic sequence, further confirmed the escaping nature of cryptic wheat-Alien translocations in introgressive breeding. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2009 journal article

Genetic resistance of spruce to gall-forming adelgids (Hemiptera: Adelgidae)

CANADIAN JOURNAL OF FOREST RESEARCH, 39(12), 2536–2541.

By: B. Bains n, F. Isik n, W. Strong n, B. Jaquish n, J. McLean n & Y. El-Kassaby n

TL;DR: This work tested the theory that susceptibility to galling is under genetic control in spruce, and observed considerable genetic variation among parents for resistance to gall formation as shown by high heritability of family means. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2009 review

Gene Ontology annotation of the rice blast fungus, Magnaporthe oryzae

[Review of ]. BMC MICROBIOLOGY, 9.

By: S. Meng n, D. Brown n, D. Ebbole*, T. Torto-Alalibo*, Y. Oh n, J. Deng n, T. Mitchell n, R. Dean n

MeSH headings : Computational Biology; Databases, Protein; Fungal Proteins / genetics; Genome, Fungal; Magnaporthe / genetics; Oryza / microbiology; Sequence Alignment; Sequence Analysis, Protein; Terminology as Topic; Vocabulary, Controlled
TL;DR: This analysis provides comprehensive and robust GO annotations of the M. oryzae genome assemblies that will be solid foundations for further functional interrogation of M.oryzae. (via Semantic Scholar)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2009 review

Common processes in pathogenesis by fungal and oomycete plant pathogens, described with Gene Ontology terms

[Review of ]. BMC MICROBIOLOGY, 9.

By: S. Meng n, T. Torto-Alalibo*, M. Chibucos*, B. Tyler* & R. Dean n

MeSH headings : Fungi / pathogenicity; Host-Pathogen Interactions; Oomycetes / pathogenicity; Plant Diseases / microbiology; Plants / microbiology; Signal Transduction; Spores / pathogenicity; Terminology as Topic; Vocabulary, Controlled
TL;DR: This mini-review identifies common features of the pathogenic processes of fungi and oomycetes and creates a pathogenesis model using 256 newly developed and 38 extant GO terms, with an emphasis on the appressorium and signal transduction. (via Semantic Scholar)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2009 review

Common and contrasting themes in host cell-targeted effectors from bacterial, fungal, oomycete and nematode plant symbionts described using the Gene Ontology

[Review of ]. BMC MICROBIOLOGY, 9(SUPPL. 1).

By: T. Torto-Alalibo*, C. Collmer*, M. Lindeberg*, D. Bird n, A. Collmer* & B. Tyler*

Contributors: T. Torto-Alalibo*, C. Collmer*, M. Lindeberg*, D. Bird n, A. Collmer* & B. Tyler*

MeSH headings : Animals; Bacteria / metabolism; Biological Transport; Fungi / metabolism; Host-Pathogen Interactions; Nematoda / metabolism; Oomycetes / metabolism; Plant Diseases / microbiology; Plants / metabolism; Plants / microbiology; Symbiosis; Terminology as Topic; Vocabulary, Controlled
TL;DR: This mini-review will summarize both similarities and differences in effectors and effector delivery systems found in diverse plant-associated symbionts as well as how these are described with Plant-Associated Microbe Gene Ontology (PAMGO) terms. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science; OpenAlex)
13. Climate Action (Web of Science)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

2009 journal article

Recombination and lineage-specific gene loss in the aflatoxin gene cluster of Aspergillus flavus

MOLECULAR ECOLOGY, 18(23), 4870–4887.

author keywords: ancestral recombination graph; balancing selection; coalescent; linkage disequilibrium
MeSH headings : Aflatoxins / genetics; Aspergillus flavus / genetics; Base Composition; DNA, Fungal / genetics; Evolution, Molecular; Genetic Variation; Genetics, Population; Genome, Fungal; Linkage Disequilibrium; Multigene Family; Recombination, Genetic; Selection, Genetic; Sequence Alignment; Sequence Analysis, DNA; Telomere / genetics
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2009 journal article

RNA interference-mediated knock-down ofBla g 1in the German cockroach,Blattella germanicaL., implicates this allergen-encoding gene in digestion and nutrient absorption

Insect Molecular Biology, 18(6), 727–736.

By: A. Suazo n, C. Gore & C. Schal n

Contributors: A. Suazo n, C. Gore & C. Schal n

author keywords: Blattella germanica; RNA interference; midgut protein; Bla g 1; allergen
MeSH headings : Allergens / genetics; Allergens / metabolism; Allergens / physiology; Animals; Antigens, Plant; Cockroaches / genetics; Cockroaches / growth & development; DNA Primers / genetics; Digestion / genetics; Digestion / physiology; Female; Intestinal Absorption / genetics; Juvenile Hormones / pharmacology; Oocytes / metabolism; RNA Interference; Reproduction / drug effects; Reproduction / genetics; Reverse Transcriptase Polymerase Chain Reaction
TL;DR: Exogenous juvenile hormone treatments rescued reproduction in RNAi‐treated females, suggesting that Bla g 1 silencing lowered endogenous juvenile hormone, probably by reducing food intake and nutrient absorption. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, ORCID, NC State University Libraries, Crossref
Added: August 6, 2018

2009 journal article

Prehatch intestinal maturation of turkey embryos demonstrated through gene expression patterns

POULTRY SCIENCE, 88(12), 2600–2609.

By: J. Oliveira n, S. Druyan n, Z. Uni*, C. Ashwell n & P. Ferket n

author keywords: turkey embryo; intestinal development; gene expression; microarray
MeSH headings : Animals; Gene Expression Profiling; Gene Expression Regulation, Developmental / physiology; Intestinal Mucosa / metabolism; Intestines / embryology; Microvilli / metabolism; Oligonucleotide Array Sequence Analysis / veterinary; Symporters / metabolism; Turkeys / embryology
TL;DR: It is concluded that at hatch, poults should have the capacity to digest disaccharides but not oligopeptides, due to increased expression of sucrase-isomaltase but decreased expression of aminopeptidases and absorb monosaccharide and small peptides due to high expression of sodium-glucose cotransporter-4 and peptide transporter-1. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2009 journal article

Non-synonymous single nucleotide polymorphisms in the watermelon eIF4E gene are closely associated with resistance to Zucchini yellow mosaic virus

THEORETICAL AND APPLIED GENETICS, 120(1), 191–200.

By: K. Ling*, K. Harris*, J. Meyer*, A. Levi*, N. Guner n, T. Wehner n, A. Bendahmane*, M. Havey*

MeSH headings : Amino Acid Sequence; Base Sequence; Chromosome Mapping; Chromosomes, Plant; Citrullus / genetics; Citrullus / virology; Crops, Agricultural / genetics; Crops, Agricultural / virology; Crosses, Genetic; Eukaryotic Initiation Factor-4E / chemistry; Eukaryotic Initiation Factor-4E / genetics; Genetic Linkage; Genetic Markers; Immunity, Innate / genetics; Models, Molecular; Molecular Sequence Data; Plant Diseases / virology; Plant Proteins / chemistry; Plant Proteins / genetics; Polymorphism, Single Nucleotide; Potyvirus / pathogenicity; Protein Isoforms / genetics; Protein Structure, Tertiary
TL;DR: The entire genomic sequence of watermelon eIF4E, including SNP241 which resulted in an amino acid substitution (proline to threonine) was shown to be located in the critical cap recognition and binding area, similar to that of several plant species resistance to potyviruses. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2009 journal article

FoxJ1-dependent gene expression is required for differentiation of radial glia into ependymal cells and a subset of astrocytes in the postnatal brain

DEVELOPMENT, 136(23), 4021–4031.

author keywords: Subventricular zone; Adult stem cell niche; Ependymal cells; Astrocytes; FoxJ1; Mouse
MeSH headings : Animals; Astrocytes / cytology; Astrocytes / metabolism; Astrocytes / ultrastructure; Brain / cytology; Brain / metabolism; Cell Differentiation / physiology; Cells, Cultured; Ependyma / cytology; Ependyma / metabolism; Ependyma / ultrastructure; Fluorescent Antibody Technique, Direct; Forkhead Transcription Factors / genetics; Forkhead Transcription Factors / metabolism; Gene Expression; Immunohistochemistry; In Situ Hybridization; Mice; Mice, Knockout; Neuroglia / cytology; Neuroglia / physiology; Neuroglia / ultrastructure
TL;DR: It is suggested that time- and cell-specific expression of FoxJ1 in the brain acts on an array of target genes to regulate the differentiation of ependymal cells and a small subset of astrocytes in the adult stem cell niche. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2009 journal article

Extensive conservation of genomic imbalances in canine transmissible venereal tumors (CTVT) detected by microarray-based CGH analysis

CHROMOSOME RESEARCH, 17(7), 927–934.

author keywords: comparative genomic hybridization (CGH); canine; transmissible venereal tumor; chromosome; microarray
MeSH headings : Animals; Comparative Genomic Hybridization; DNA Copy Number Variations; Dog Diseases / genetics; Dog Diseases / immunology; Dog Diseases / transmission; Dogs; Female; Gene Expression Regulation, Neoplastic; Genome; Male; Oligonucleotide Array Sequence Analysis; Venereal Tumors, Veterinary / genetics; Venereal Tumors, Veterinary / immunology
TL;DR: Characterization of a strategically selected panel of CTVT cases is presented using microarray-based comparative genomic hybridization analysis, showing for the first time that the tumor presents with an extensive range of non-random chromosome copy number aberrations that are distributed widely throughout the dog genome. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: Web Of Science
Added: August 6, 2018

2009 journal article

Carbohydrate Utilization Patterns for the Extremely Thermophilic Bacterium Caldicellulosiruptor saccharolyticus Reveal Broad Growth Substrate Preferences

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 75(24), 7718–7724.

By: A. VanFossen n, M. Verhaart*, S. Kengen* & R. Kelly n

MeSH headings : ATP-Binding Cassette Transporters / genetics; ATP-Binding Cassette Transporters / metabolism; Biofuels; Biological Transport; Carbohydrate Metabolism; Gene Expression Profiling; Genes, Bacterial; Gram-Positive Bacteria / genetics; Gram-Positive Bacteria / growth & development; Lignin / metabolism; Monosaccharides / metabolism; Oligonucleotide Array Sequence Analysis
TL;DR: The results presented here affirm the broad growth substrate preferences of C. saccharolyticus on carbohydrates representative of lignocellulosic biomass and suggest that this bacterium holds promise for biofuel applications. (via Semantic Scholar)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2009 journal article

Y: The last man [Review]

SFRA Review, (289), 26.

By: D. Orcutt

Sources: NC State University Libraries, ORCID
Added: August 6, 2018

2009 journal article

Thermal instability in a porous medium layer saturated by a nanofluid

INTERNATIONAL JOURNAL OF HEAT AND MASS TRANSFER, 52(25-26), 5796–5801.

By: D. Nield* & A. Kuznetsov

author keywords: Nanofluid; Porous medium; Instability; Natural convection
Source: Web Of Science
Added: August 6, 2018

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