Works Published in 2022

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Displaying works 381 - 400 of 653 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2022 journal article

Genomic Analysis Reveals That Isolation Temperature on Selective Media Introduces Genetic Variation in Campylobacter jejuni from Bovine Feces

PATHOGENS, 11(6).

By: S. Fan n, D. Foster n, S. Zhao*, S. Mukherjee*, Y. Shrestha*, C. Parsons n, S. Kathariou n

author keywords: ceftiofur; temperature; cattle; Campylobacter jejuni; whole genome sequencing; cgMLST; wgMLST; genetic variation
TL;DR: It is suggested that the temperature of isolation may impact the sequence of several loci in C. jejuni from cattle as well as core genome and whole genome MLST, suggesting a persistent impact of temperature. (via Semantic Scholar)
Source: Web Of Science
Added: July 5, 2022

2022 journal article

Differences in the Propensity of Different Antimicrobial Resistance Determinants to Be Disseminated via Transformation in Campylobacter jejuni and Campylobacter coli

MICROORGANISMS, 10(6).

By: Z. Hanafy n, J. Osborne n, W. Miller*, C. Parker*, J. Olson n, J. Jackson n, S. Kathariou n

author keywords: antimicrobial resistance; AMR; Campylobacter; transformation
TL;DR: Findings from this experimental model provide insights into factors that may impact transformation-mediated transfer of AMR leading to AMR dissemination in the agricultural ecosystem. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Source: Web Of Science
Added: July 5, 2022

2022 journal article

The effects of soil properties, cropping systems and geographic location on soil prokaryotic communities in four maize production regions across China

JOURNAL OF INTEGRATIVE AGRICULTURE, 21(7), 2145–2157.

By: T. Xue-liang*, L. Jia-jia*, L. Quan-cheng*, X. Xin-yao*, P. Yong*, A. Huerta n, Y. Jian-bing*, L. Hui*, L. Wen-de*

author keywords: metagenome; cropping system; maize; soil prokaryotes
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
15. Life on Land (Web of Science; OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: July 5, 2022

2022 article

Empirical comparison of genomic and phenotypic selection for resistance to Fusarium ear rot and fumonisin contamination in maize

Butoto, E. N., Brewer, J. C., & Holland, J. B. (2022, July 4). THEORETICAL AND APPLIED GENETICS, Vol. 7.

By: E. Butoto n, J. Brewer* & J. Holland n

MeSH headings : Fumonisins; Fusarium / physiology; Genomics / methods; Plant Breeding; Plant Diseases / genetics; Zea mays / genetics
TL;DR: Practical implementation of GS in individual small-scale breeding programs will require cheaper and faster genotyping methods, and such technological advances will present opportunities to significantly optimize selection and mating schemes for future GS efforts beyond what was able to achieve in this study. (via Semantic Scholar)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: July 5, 2022

2022 article

Genomic consequences of artificial selection during early domestication of a wood fibre crop

Mostert-O'Neill, M. M., Tate, H., Reynolds, S. M., Mphahlele, M. M., Berg, G., Verryn, S. D., … Myburg, A. A. (2022, July 2). NEW PHYTOLOGIST, Vol. 7.

author keywords: artificial selection; domestication; eucalypt; forestry; population genomics; selection signatures
MeSH headings : Domestication; Genome, Plant; Genomics; Plant Breeding; Polymorphism, Single Nucleotide / genetics; Selection, Genetic; Wood / genetics
TL;DR: This is the first study of genomic signatures of domestication in a timber species looking beyond the first few generations of cultivation, and highlights the importance of intra‐ and interspecific hybridization during early domestication. (via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action (Web of Science)
Sources: ORCID, Web Of Science
Added: July 3, 2022

2022 article

Development, Validation, and Utility of Species-Specific Diagnostic Markers for Detection of Peronospora belbahrii

Standish, J. R., Gongora-Castillo, E., Bowman, M. J., Childs, K. L., Tian, M., & Quesada-Ocampo, L. M. (2022, July 1). PHYTOPATHOLOGY, Vol. 7.

author keywords: bioinformatics; disease control and pest management; genomics; oomycetes; pathogen detection
MeSH headings : Ocimum basilicum; Oomycetes / genetics; Peronospora / genetics; Plant Diseases; Plant Leaves
TL;DR: In this study, a draft genome assembly and next generation sequencing reads for P. belbahrii, and publicly available DNAseq and RNAseq reads of several other downy mildew pathogens, were incorporated into a bioinformatics pipeline to predict P.BelBahrii-specific diagnostic markers and develop a highly sensitive probe-based real-time qPCR assay. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: July 2, 2022

2022 journal article

Exploring methods to summarize gut microbiota composition for microbiability estimation and phenotypic prediction in swine

JOURNAL OF ANIMAL SCIENCE, 100(9).

By: Y. He n, F. Tiezzi n, J. Jiang n, J. Howard, Y. Huang, K. Gray*, J. Choi*, C. Maltecca n

Contributors: Y. He n, F. Tiezzi n, J. Jiang n, J. Howard, Y. Huang, K. Gray*, J. Choi*, C. Maltecca n

author keywords: Gut microbiota; microbial similarity matrix; microbiability; prediction; swine
MeSH headings : Animals; Body Composition / genetics; Gastrointestinal Microbiome; Male; Phenotype; RNA, Ribosomal, 16S / genetics; Swine
UN Sustainable Development Goal Categories
Sources: ORCID, Web Of Science, NC State University Libraries
Added: July 2, 2022

2022 review

The intersection between circadian and heat-responsive regulatory networks controls plant responses to increasing temperatures

[Review of ]. BIOCHEMICAL SOCIETY TRANSACTIONS, 50(3), 1151–1165.

By: K. Laosuntisuk n & C. Doherty n

MeSH headings : Arabidopsis / metabolism; Arabidopsis Proteins / metabolism; Circadian Clocks / genetics; Circadian Rhythm; Gene Expression Regulation, Plant; Hypocotyl / metabolism; Temperature; Transcription Factors / metabolism
TL;DR: The network responses to increased temperatures, heat stress, and the impacts on the mechanisms of gene expression from transcription to translation are reviewed, highlighting the intersections between the elevated temperature and heat stress response pathways and circadian signaling. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Sources: ORCID, Web Of Science, NC State University Libraries
Added: June 28, 2022

2022 journal article

Accounting for population structure in genetic studies of cystic fibrosis

HUMAN GENETICS AND GENOMICS ADVANCES, 3(3).

By: H. Kingston*, A. Stilp*, W. Gordon*, J. Broome*, S. Gogarten*, H. Ling*, J. Barnard*, S. Dugan-Perez* ...

TL;DR: The results suggest that PC adjustment can adequately prevent spurious associations between genetic variants and CF-related traits and are therefore effective tools to control for population structure even when population structure is confounded with disease severity and a common pathogenic variant. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: June 27, 2022

2022 journal article

Key Knowledge Gaps to Fill at the Cell-To-Ecosystem Level in Marine B-Vitamin Cycling

FRONTIERS IN MARINE SCIENCE, 9.

author keywords: nutrient cycling; marine plankton; B-vitamin; vitamin B12; vitamin B1; microbial interactions; cross-feeding; auxotrophy
TL;DR: It is argued that significant advances in understanding of the impact of B-vitamin exchange and cycling on marine community structure and biogeochemistry can be made by focusing on unknowns related to the ‘in’s and out’ of B’vitamin transport, exchange between plankton, and ecosystem scale processing/transformation ofB-vitamins. (via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water (OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: June 27, 2022

2022 journal article

Resolving the phylogenetic relationship among recently diverged members of the rockfish subgenus Sebastosomus

MOLECULAR PHYLOGENETICS AND EVOLUTION, 173.

author keywords: Phylogeny; ddRADseq; Sebastosomus; Adaptive radiation; Single Nucleotide Polymorphism; Cryptic species
MeSH headings : Animals; DNA, Mitochondrial / genetics; Microsatellite Repeats; Perciformes / genetics; Phylogeny; Sequence Analysis, DNA
TL;DR: This work reconstructed the phylogenetic relationships among six species of rockfish within the subgenus Sebastosomus using over 11,600 SNPs and confirmed the relationship of these cryptic species as sister-taxa and found evidence that S. melanops and S. flavidus were also sister- Taxa. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: June 27, 2022

2022 review

Mechanisms of coordinating hyaluronan and glycosaminoglycan production by nucleotide sugars

[Review of ]. AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY, 322(6), C1201–C1213.

By: B. Zimmer n, J. Barycki n & M. Simpson n

author keywords: hexosamine biosynthesis pathway; hyaluronan; nucleotide sugars; UDP-glucuronate; UDP-N-acetylglucosamine
MeSH headings : Glycosaminoglycans; Hyaluronan Synthases / genetics; Hyaluronic Acid / metabolism; Nucleotides; Sugars; Uridine Diphosphate N-Acetylglucosamine / metabolism
TL;DR: Recent structures of several key rate-limiting enzymes in the UDP-sugar synthesis pathways have offered new insights to the overall regulation of hyaluronan production by precursor fate decisions. (via Semantic Scholar)
UN Sustainable Development Goal Categories
7. Affordable and Clean Energy (OpenAlex)
Source: Web Of Science
Added: June 27, 2022

2022 journal article

Citizen Science as an Ecosystem of Engagement: Implications for Learning and Broadening Participation

BIOSCIENCE, 72(7), 651–663.

By: B. Allf*, C. Cooper*, L. Larson n, R. Dunn*, S. Futch*, M. Sharova*, D. Cavalier*

author keywords: public science; conservation; volunteer management; crowdsourcing; education
UN Sustainable Development Goal Categories
13. Climate Action (Web of Science)
15. Life on Land (Web of Science)
Sources: Web Of Science, ORCID
Added: June 23, 2022

2022 journal article

Genotyping and phenotyping strategies for genetic improvement of meat quality and carcass composition in swine

GENETICS SELECTION EVOLUTION, 54(1).

By: E. Lozada-Soto n, D. Lourenco*, C. Maltecca n, J. Fix*, C. Schwab*, C. Shull, F. Tiezzi*

Contributors: E. Lozada-Soto n, D. Lourenco*, C. Maltecca n, J. Fix*, C. Schwab*, C. Shull, F. Tiezzi*

MeSH headings : Animals; Genome; Genotype; Meat; Phenotype; Pork Meat; Swine / genetics
Sources: Web Of Science, NC State University Libraries, ORCID
Added: June 20, 2022

2022 article

Landscape genetics of an endangered salt marsh endemic: Identifying population continuity and barriers to dispersal

Statham, M. J., Aylward, C. M., Barthman-Thompson, L., Kierepka, E. M., & Sacks, B. N. (2022, June 7). CONSERVATION GENETICS, Vol. 6.

author keywords: Circuitscape; Endangered species; Habitat fragmentation; Landscape genetics; Population substructure; Salt marsh harvest mouse
TL;DR: The identification of landscape features that act as barriers to dispersal enables the identification of isolated and vulnerable populations more broadly across the species range, thus aiding conservation prioritization. (via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water (OpenAlex)
15. Life on Land (Web of Science)
Sources: Web Of Science, ORCID
Added: June 20, 2022

2022 journal article

Characterization and distribution of kisspeptins, kisspeptin receptors, GnIH, and GnRH1 in the brain of the protogynous bluehead wrasse (Thalassoma bifasciatum)

JOURNAL OF CHEMICAL NEUROANATOMY, 121.

By: M. Lamm n, A. Lamb n, B. Klapheke n, W. Tyler* & J. Godwin n

author keywords: Kisspeptin; GnRH; GnIH; Teleost; Reproduction; Sex change
MeSH headings : Animals; Brain / metabolism; Female; Gonadotropin-Releasing Hormone / metabolism; Gonadotropins / metabolism; Kisspeptins / genetics; Kisspeptins / metabolism; Male; Perciformes / metabolism
TL;DR: This study characterized expression of kisspeptin-system genes (kiss1, kiss2, kissr1, and kissr2), gnih, and gnrh1 in the brain of the bluehead wrasse, an important teleost model of socially-controlled sex change and suggested that if kisspeptins do signal GnRH1 neurons, the interaction is indirect, possibly through neurons adjacent to Gn RH1. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries
Added: June 20, 2022

2022 journal article

Economic contributions of wildlife management areas in North Carolina

FOREST POLICY AND ECONOMICS, 140.

author keywords: Wildlife management areas; Economic contribution; IMPLAN; Input -output model; Recreation; Hunting
Source: Web Of Science
Added: June 20, 2022

2022 article

Floral shape predicts bee-parasite transmission potential

Pinilla-Gallego, M. S., Ng, W. H., Amaral, V. E., & Irwin, R. E. (2022, June 12). ECOLOGY.

author keywords: bee decline; Bombus impatiens; Crithidia bombi; floral traits; transmission dynamics
MeSH headings : Animals; Bees; Crithidia; Ecosystem; Flowers / anatomy & histology; Parasites; Phenotype; Pollination
TL;DR: The results highlight the importance of flower species identity and floral traits in disease transmission dynamics of bee parasites, and floral shape as an important predictor of overall transmission potential. (via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land (Web of Science; OpenAlex)
Source: Web Of Science
Added: June 20, 2022

2022 journal article

Phylogeny-guided microbiome OTU-specific association test (POST)

MICROBIOME, 10(1).

author keywords: Association test; Phylogenetic tree; Kernel machine regression
MeSH headings : Computational Biology / methods; Computer Simulation; Female; Humans; Infant, Newborn; Microbiota / genetics; Phylogeny; Premature Birth
TL;DR: This work proposes a local collapsing test called phylogeny-guided microbiome OTU-specific association test (POST), and develops a user friendly R package POSTm, which can enhance the selection performance of associated microbiome features by improving the overall true-positive and false-positive detection. (via Semantic Scholar)
Sources: Web Of Science, ORCID
Added: June 20, 2022

2022 journal article

Creating hierarchically porous banana paper-metal organic framework (MOF) composites with multifunctionality

APPLIED MATERIALS TODAY, 28.

By: S. Wang n, T. Pirzada n, W. Xie n, E. Barbieri n, O. Hossain n, C. Opperman n, L. Pal n, Q. Wei n, G. Parsons n, S. Khan n

author keywords: lignocellulosic biomass; Banana fiber; Gas sorption; Antibacterial matrix; MOF-fiber composites; VOC sensor
Sources: Web Of Science, ORCID
Added: June 20, 2022

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