Works Published in 2017

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Displaying works 461 - 480 of 748 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2017 journal article

Penicillin-binding protein encoded by pbp4 is involved in mediating copper stress in Listeria monocytogenes

FEMS MICROBIOLOGY LETTERS, 364(20).

By: C. Parsons n, B. Costolo n, P. Brown n & S. Kathariou n

author keywords: Listeria monocytogenes; copper homeostasis; virulence; biofilm; penicillin-binding protein; beta-lactam antibiotic resistance
MeSH headings : Biofilms / drug effects; Copper / metabolism; DNA Transposable Elements; Disease Outbreaks; Humans; Listeria monocytogenes / genetics; Listeria monocytogenes / metabolism; Listeriosis / epidemiology; Listeriosis / microbiology; Microbial Sensitivity Tests; Mutation / genetics; Penicillin-Binding Proteins / genetics; Penicillin-Binding Proteins / metabolism; Plasmids / genetics; Virulence / drug effects; beta-Lactamase Inhibitors / pharmacology; beta-Lactams / metabolism
TL;DR: Findings provide the first evidence for the role of a PBP in copper tolerance of L. monocytogenes and suggest that pbp4 may be a suitable target to enable the use of lower levels of copper or enhance the effectiveness of levels currently in use. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2017 journal article

Molecular approaches for biosurveillance of the cucurbit downy mildew pathogen, Pseudoperonospora cubensis

CANADIAN JOURNAL OF PLANT PATHOLOGY, 39(3), 282–296.

author keywords: biosurveillance; diagnostics; downy mildew; genomics; next generation sequencing; oomycetes
TL;DR: Approaches to identify unique loci for rapid molecular diagnostics using genomic data, to develop molecular diagnostic tools that discriminate economically important pathogen alleles, and how to use moleculardiagnostics with current and future spore trap strategies for biosurveillance purposes of important downy mildew pathogens are discussed. (via Semantic Scholar)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

2017 chapter

Large-scale patterns of forest fire occurrence in the conterminous United States, Alaska, and Hawaii, 2015

In Forest Health Monitoring: National Status, Trends and Analysis, 2016: Vol. 43-. Asheville, NC: U.S. Department of Agriculture, Forest Service, Research & Development, Southern Research Station.

By: K. Potter & J. Paschke

Source: NC State University Libraries
Added: August 6, 2018

2017 journal article

Investigating the Effect of Growth Phase on the Surface-Layer Associated Proteome of Lactobacillus acidophilus Using Quantitative Proteomics

FRONTIERS IN MICROBIOLOGY, 8.

author keywords: Lactobacillus; probiotic; cell surface; S-layer; quantitative proteomics
TL;DR: This study establishes a framework for quantifying condition-dependent changes to cell surface proteins that can easily be applied to other S-layer forming bacteria. (via Semantic Scholar)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2017 journal article

Impact of growth mode, phase, and rate on the metabolic state of the extremely thermophilic archaeon Pyrococcus furiosus

BIOTECHNOLOGY AND BIOENGINEERING, 114(12), 2947–2954.

author keywords: continuous culture; growth phase; growth rate; hyperthermophiles; Pyrococcus furiosus; transcriptome
MeSH headings : Archaeal Proteins / metabolism; Batch Cell Culture Techniques / methods; Cell Proliferation / physiology; Energy Metabolism / physiology; Pyrococcus furiosus / growth & development; Pyrococcus furiosus / metabolism; Transcriptome / physiology
TL;DR: The results here suggest that cellular processes involved in carbon and electron flux in P. furiosus were significantly impacted by growth mode, phase and rate, factors that need to be taken into account when developing successful metabolic engineering strategies. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2017 journal article

Global population structure and adaptive evolution of aflatoxin-producing fungi

Ecology and Evolution, 7(21), 9179–9191.

By: G. Moore*, R. Olarte*, B. Horn*, J. Elliott n, R. Singh n, C. O'Neal n, I. Carbone n

author keywords: Aspergillus; balancing selection; maximum likelihood; multilocus sequence typing; principal component analysis
TL;DR: While clay soil and precipitation may influence species richness in Aspergillus section Flavi, other region‐specific environmental and genetic parameters must also be considered. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2017 journal article

Genetic effects on gene expression across human tissues

Nature, 550(7675), 204-.

By: F. Aguet, A. Brown, S. Castel, J. Davis, Y. He, B. Jo, P. Mohammadi, Y. Park ...

Source: NC State University Libraries
Added: August 6, 2018

2017 journal article

Frequent fires eliminate fleshy fruit production

FOREST ECOLOGY AND MANAGEMENT, 405, 9–12.

author keywords: Fire-return interval; Frugivore; Longleaf pine; Prescribed fire; Pyrodiversity
TL;DR: These results suggest that applying fire on Pinus palustris ecosystems is recommended, despite the fact that cumulative understory fruit production was 99% less following a 1-yr or 2-yr fire-return interval. (via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action (Web of Science)
15. Life on Land (Web of Science; OpenAlex)
Source: Web Of Science
Added: August 6, 2018

2017 journal article

Editor's Highlight: Comparative Dose-Response Analysis of Liver and Kidney Transcriptomic Effects of Trichloroethylene and Tetrachloroethylene in B6C3F1 Mouse

TOXICOLOGICAL SCIENCES, 160(1), 95–110.

By: Y. Zhou n, J. Cichocki*, V. Soldatow*, E. Scholl n, P. Gallins n, D. Jima n, H. Yoo*, W. Chiu*, F. Wright n, I. Rusyn*

author keywords: volatile organic compounds; agents; toxicogenomics; methods; dose-response; risk assessment; kidney; systems toxicology; liver; systems toxicology
MeSH headings : Animals; Dose-Response Relationship, Drug; Environmental Pollutants / toxicity; Gene Expression Profiling / methods; Gene Expression Regulation; Gene Regulatory Networks; Kidney / drug effects; Kidney / metabolism; Liver / drug effects; Liver / metabolism; Male; Mice; Risk Assessment; Sequence Analysis, RNA; Tetrachloroethylene / toxicity; Transcriptome; Trichloroethylene / toxicity
TL;DR: D dose-response modeling of the transcriptomic data was performed and the resulting points of departure (PODs) were compared to those for apical endpoints derived from long-term studies with these chemicals in rats, mice, and humans, converting to human equivalent doses using tissue-specific dosimetry models. (via Semantic Scholar)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2017 journal article

Disruption of Trim9 function abrogates macrophage motility in vivo

Journal of Leukocyte Biology, 102(6), 1371–1380.

By: D. Tokarz n, A. Heffelfinger n, D. Jima n, J. Gerlach n, R. Shah n, I. Rodriguez-Nunez n, A. Kortum n, A. Fletcher n ...

author keywords: chemotaxis; zebrafish; leukocyte; ubiquitin
MeSH headings : Animals; Cell Movement / genetics; Cell Shape; Chemotaxis; Humans; Macrophages / cytology; Macrophages / metabolism; Nerve Tissue Proteins / genetics; Nerve Tissue Proteins / metabolism; RNA, Messenger / genetics; RNA, Messenger / metabolism; Tripartite Motif Proteins / genetics; Tripartite Motif Proteins / metabolism; U937 Cells; Ubiquitin-Protein Ligases / genetics; Ubiquitin-Protein Ligases / metabolism; Zebrafish / genetics; Zebrafish / immunology; Zebrafish Proteins / genetics; Zebrafish Proteins / metabolism
TL;DR: It is demonstrated that Trim9 mediates cellular movement and migration in Mϕs as well as neurons, and is implicated in axonal migration, and found that M ϕ chemotaxis and cellular architecture are subsequently impaired in vivo. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries, ORCID, Crossref
Added: August 6, 2018

2017 journal article

Disease Resistance to Multiple Fungal and Oomycete Pathogens Evaluated Using a Recombinant Inbred Line Population in Pepper

PHYTOPATHOLOGY, 107(12), 1522–1531.

By: R. Naegele n, L. Granke n, J. Fry n, T. Hill n, H. Ashrafi n, A. Van Deynze*, M. Hausbeck n

author keywords: Capsicum annuum; host resistance
MeSH headings : Capsicum / genetics; Capsicum / immunology; Capsicum / microbiology; Disease Resistance / genetics; Fruit / genetics; Fruit / immunology; Fruit / microbiology; Fungi / physiology; Genetic Linkage; Phytophthora / physiology; Plant Diseases / immunology; Plant Diseases / microbiology; Quantitative Trait Loci / genetics
TL;DR: No sites of MDR were identified for pathogens tested; however, positive correlations in disease incidence were detected among pathogens suggesting there may be genetic linkage among resistance genes in CM334 and Early Jalapeno. (via Semantic Scholar)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

2017 journal article

Direct Access to Highly Functionalized Heterocycles through the Condensation of Cyclic Imines and alpha-Oxoesters

JOURNAL OF ORGANIC CHEMISTRY, 82(24), 13714–13721.

MeSH headings : Cyclization; Heterocyclic Compounds / chemistry; Imines / chemistry; Molecular Structure
TL;DR: A facile, gram-scale preparation from a condensation cyclization of α-oxoesters with five- and six-membered cyclic imines enables a concise, three-step synthesis of the natural products phenopyrrozin and p-hydroxyphenopyr rozin. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

2017 journal article

Diet and feed efficiency status affect rumen microbial profiles of sheep

SMALL RUMINANT RESEARCH, 156, 12–19.

By: M. Ellison*, G. Conant*, W. Lamberson*, R. Cockrum*, K. Austin*, D. Rule*, K. Cammack*

author keywords: Diet; Feed efficiency; Microbes; Rumen; Sheep
TL;DR: It is confirmed that diet is a major influence on composition of the rumen microbiome and key microbial species may play important roles in the regulation of feed efficiency, and those species may differ according to diet composition. (via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2017 conference paper

Coordinating the IUCN Red List of North American tree species: A special session at the USFS gene conservation of tree species workshop

Gene conservation of tree species--banking on the future. Proceedings of a workshop. Gen. Tech. Rep. PNW-GTR-963, 12–23. Portland: U.S. Department of Agriculture, Forest Service, Pacific Northwest Research Station.

By: M. Westwood, A. Frances, G. Man, D. Pivorunas & K. Potter

Source: NC State University Libraries
Added: August 6, 2018

2017 journal article

Comparative proteomic analysis between nitrogen supplemented and starved conditions in Magnaporthe oryzae

Proteome Science, 15.

By: Y. Oh, S. Robertson, J. Parker, D. Muddiman & R. Dean

Source: NC State University Libraries
Added: August 6, 2018

2017 journal article

Biaxial mechanical properties of bovine jugular venous valve leaflet tissues

Biomechanics and Modeling in Mechanobiology, 16(6), 1911–1923.

By: H. Huang n & J. Lu n

author keywords: Anisotropy; Tissue biomechanics; Biaxial testing; Chronic venous insufficiency
MeSH headings : Animals; Biomechanical Phenomena; Cattle; Collagen / metabolism; Elastic Modulus; Jugular Veins / physiology; Stress, Mechanical; Venous Valves / physiology
TL;DR: Equibiaxial tensile mechanical tests were conducted to assess the tangent modulus, strength and anisotropy of venous valve leaflet tissues from bovine jugular veins and provide a baseline for studying venous valves incompetence at the tissue level and a quantitative basis for prosthetic venous Valve design. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, Crossref
Added: August 6, 2018

2017 journal article

Assessing species biomass contributions in microbial communities via metaproteomics

NATURE COMMUNICATIONS, 8.

By: M. Kleiner*, E. Thorson*, C. Sharp*, X. Dong*, D. Liu*, C. Li*, M. Strous*

MeSH headings : Archaea / classification; Archaea / genetics; Archaea / metabolism; Bacteria / classification; Bacteria / genetics; Bacteria / metabolism; Bacteriophages / classification; Bacteriophages / genetics; Bacteriophages / metabolism; Biomass; Genomics / methods; Humans; Lakes / microbiology; Microbiota / genetics; Microbiota / physiology; Proteome / metabolism; Proteomics / methods; RNA, Ribosomal, 16S / genetics; Saliva / microbiology
TL;DR: The method is applied to communities from two different environments, microbial mats from two alkaline soda lakes, and saliva from multiple individuals and it is shown that assessment of species biomass contributions adds an important dimension to the analysis of microbial community structure. (via Semantic Scholar)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018

2017 journal article

Angiotensin-converting enzyme activity and inhibition in dogs with cardiac disease and an angiotensin-converting enzyme polymorphism

JOURNAL OF THE RENIN-ANGIOTENSIN-ALDOSTERONE SYSTEM, 18(4).

By: K. Meurs n, J. Stern n, C. Atkins n, D. Adin n, B. Aona n, J. Condit n, T. DeFrancesco n, Y. Reina-Doreste n ...

author keywords: Polymorphism; canine; angiotensin-converting enzyme; enalapril
MeSH headings : Angiotensin-Converting Enzyme Inhibitors / therapeutic use; Animals; Breeding; Dogs; Genotype; Heart Diseases / drug therapy; Heart Diseases / enzymology; Heart Diseases / genetics; Peptidyl-Dipeptidase A / genetics; Polymorphism, Genetic
TL;DR: It is possible that the genetic status and ACE activity of dogs may impact the response of dogs with this variant to an ACE inhibitor, and an ACE polymorphism is associated with lower levels of ACE activity. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2017 journal article

Alterations of CorTFL1 and CorAP1 expression correlate with major evolutionary shifts of inflorescence architecture in Cornus (Cornaceae) - a proposed model for variation of closed inflorescence forms

NEW PHYTOLOGIST, 216(2), 519–535.

By: Q. Ma n, X. Liu n, R. Franks n & Q. Xiang n

Contributors: Q. Ma n, X. Liu n, R. Franks n & Q. Xiang n

author keywords: CorAP1; Cornus; CorTFL1; evolutionary development; gene expression; inflorescence; in situ hybridization; quantitative real-time polymerase chain reaction (qRT-PCR)
MeSH headings : Biological Evolution; Cornaceae / anatomy & histology; Cornaceae / genetics; Cornaceae / growth & development; Gene Expression Regulation, Developmental; Gene Expression Regulation, Plant; In Situ Hybridization; Inflorescence / anatomy & histology; Inflorescence / genetics; Models, Biological; Models, Genetic; Phylogeny; Plant Proteins / genetics; Plant Proteins / metabolism; Real-Time Polymerase Chain Reaction; Species Specificity
TL;DR: The study found a clear correlation between the expression patterns of CorTFL1 and CorAP1 and the inflorescence architecture in a natural system displaying closed inflorescences and proposes that a TFL1-like and AP1- like gene-based model may explain variation of closed inflorescenceences in Cornus and other lineages. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2017 journal article

A comparison of sequencing platforms and bioinformatics pipelines for compositional analysis of the gut microbiome

BMC MICROBIOLOGY, 17.

By: I. Allali*, J. Arnold*, J. Roach*, M. Cadenas*, N. Butz*, H. Hassan n, M. Koci n, A. Ballou n ...

author keywords: 16S rRNA amplicon sequencing; microbiome analysis; microbiome; microbiome composition; next generation sequencing platforms; Bioinformatics pipeline; NGS bias
MeSH headings : Analysis of Variance; Animals; Bacteria / classification; Bacteria / genetics; Base Sequence; Biodiversity; Cecum / microbiology; Chickens / microbiology; Computational Biology / instrumentation; Computational Biology / methods; DNA, Bacterial / analysis; DNA, Bacterial / genetics; DNA, Bacterial / isolation & purification; Gastrointestinal Microbiome / genetics; Gene Library; High-Throughput Nucleotide Sequencing / instrumentation; High-Throughput Nucleotide Sequencing / methods; Microbial Consortia / genetics; Multivariate Analysis; Phylogeny; RNA, Ribosomal, 16S / genetics; Reproducibility of Results; Statistics as Topic
TL;DR: Overall microbiome compositional profiles were comparable between platforms; however, average relative abundance of specific taxa varied depending on sequencing platform, library preparation method, and bioinformatics analysis. (via Semantic Scholar)
Sources: Web Of Science, ORCID
Added: August 6, 2018

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