Genetics and Genomics Academy

Interdisciplinary Programs

Works Published in 2018

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Displaying works 541 - 560 of 584 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2018 journal article

A SNP-based high-density linkage map of zoysiagrass (Zoysia japonica Steud.) and its use for the identification of QTL associated with winter hardiness

MOLECULAR BREEDING, 38(1).

By: H. McCamy n, P. Holloway, X. Yu n, J. Dunne n, B. Schwartz*, A. Patton*, C. Arellano n, S. Milla-Lewis n

author keywords: Freeze tolerance; Genetic map; QTL; SNP; Winter survival; Zoysiagrass
Source: Web Of Science
Added: August 6, 2018

2018 journal article

Toward the Rational Design of Sustainable Hair Dyes Using Cheminformatics Approaches: Step 1. Database Development and Analysis

ACS SUSTAINABLE CHEMISTRY & ENGINEERING, 6(2), 2344–2352.

author keywords: Cheminformatics; Hair dyes; HDSD; Mutagenicity; Skin sensitization; Sustainability
Source: Web Of Science
Added: August 6, 2018

2018 journal article

The genetic architecture of ecological adaptation: intraspecific variation in host plant use by the lepidopteran crop pest Chloridea virescens

HEREDITY, 120(3), 234–250.

MeSH headings : Adaptation, Biological / genetics; Amplified Fragment Length Polymorphism Analysis; Animals; Feeding Behavior; Genetic Linkage; Larva / genetics; Moths / genetics; Physalis; Quantitative Trait Loci; Selection, Genetic
Source: Web Of Science
Added: August 6, 2018

2018 journal article

Robust Transcriptional Activation in Plants Using Multiplexed CRISPR-Act2.0 and mTALE-Act Systems

Molecular Plant, 11(2), 245–256.

author keywords: CRISPR; gRNA2.0; MS2-VP64; TALE-VP64; multiplex; transcriptional activation
MeSH headings : CRISPR-Cas Systems / genetics; Clustered Regularly Interspaced Short Palindromic Repeats / genetics; Gene Expression Regulation, Plant / genetics; Gene Expression Regulation, Plant / physiology; Transcription Factors / genetics; Transcription Factors / metabolism; Transcriptional Activation / genetics; Transcriptional Activation / physiology
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2018 journal article

QTL mapping of downy and powdery mildew resistances in PI 197088 cucumber with genotyping-by-sequencing in RIL population

THEORETICAL AND APPLIED GENETICS, 131(3), 597–611.

By: Y. Wang*, K. VandenLangenberg n, C. Wen*, T. Wehner n & Y. Weng*

MeSH headings : Ascomycota; Chromosome Mapping; Cucumis sativus / genetics; Cucumis sativus / microbiology; Disease Resistance / genetics; Genetic Linkage; Genotype; Microsatellite Repeats; Peronospora; Phenotype; Plant Diseases / genetics; Plant Diseases / microbiology; Polymorphism, Single Nucleotide; Quantitative Trait Loci
Sources: Web Of Science, ORCID
Added: August 6, 2018

2018 journal article

Population-based dose-response analysis of liver transcriptional response to trichloroethylene in mouse

MAMMALIAN GENOME, 29(1-2), 168–181.

By: A. Venkatratnam*, J. House n, K. Konganti*, C. McKenney n, D. Threadgill*, W. Chiu*, D. Aylor n, F. Wright n, I. Rusyn*

MeSH headings : Animals; Dose-Response Relationship, Drug; Genetics, Population; Kidney / drug effects; Kidney / metabolism; Liver / drug effects; Liver / metabolism; Mice; Transcription, Genetic / drug effects; Transcriptome / genetics; Trichloroacetic Acid / metabolism; Trichloroethylene / toxicity
Source: Web Of Science
Added: August 6, 2018

2018 journal article

Population genetic diversity in zebrafish lines

MAMMALIAN GENOME, 29(1-2), 90–100.

MeSH headings : Animals; Gene Frequency; Genetic Variation; Genetics, Population; Genome / genetics; Polymorphism, Single Nucleotide / genetics; Zebrafish / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018

2018 journal article

Plasmodium knowlesi invasion following spread by infected mosquitoes, macaques and humans

PARASITOLOGY, 145(1), 101–110.

author keywords: invasion analysis; Plasmodium knowlesi; vector-borne disease; mathematical model; vector behaviour
MeSH headings : Animals; Anopheles / parasitology; Anopheles / physiology; Host-Parasite Interactions; Humans; Macaca; Malaria / parasitology; Malaria / transmission; Malaria / veterinary; Models, Biological; Monkey Diseases / parasitology; Monkey Diseases / transmission; Monte Carlo Method; Mosquito Vectors / parasitology; Mosquito Vectors / physiology; Plasmodium knowlesi / physiology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2018 review

Methods for enhancing cyanobacterial stress tolerance to enable improved production of biofuels and industrially relevant chemicals

[Review of ]. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 102(4), 1617–1628.

By: R. Kitchener n & A. Grunden n

author keywords: Cyanobacteria; Biofuel; Stress tolerance; Stress response; Stress mitigation
MeSH headings : Alcohols / metabolism; Alcohols / toxicity; Alkanes / metabolism; Alkanes / toxicity; Biofuels / toxicity; Cyanobacteria / drug effects; Cyanobacteria / genetics; Cyanobacteria / physiology; Drug Tolerance; Ethylenes / metabolism; Ethylenes / toxicity; Fatty Acids / metabolism; Fatty Acids / toxicity; Genetic Engineering / methods; Industrial Microbiology / methods; Stress, Physiological
Sources: Web Of Science, ORCID
Added: August 6, 2018

2018 journal article

Large sub-clonal variation in Phytophthora infestans from recent severe late blight epidemics in India

Scientific Reports, 8(1).

By: T. Dey*, A. Saville n, K. Myers*, S. Tewari, D. Cooke*, S. Tripathy*, W. Fry*, J. Ristaino n, S. Guha Roy*

MeSH headings : Epidemics; Europe; Evolution, Molecular; India; Multilocus Sequence Typing / methods; Phylogeny; Phylogeography; Phytophthora infestans / classification; Phytophthora infestans / genetics; Phytophthora infestans / pathogenicity; Plant Diseases / parasitology; Sequence Analysis, DNA / methods; Solanum tuberosum / parasitology; United Kingdom
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2018 journal article

Landscape correlates of forest plant invasions: A high-resolution analysis across the eastern United States

DIVERSITY AND DISTRIBUTIONS, 24(3), 274–284.

author keywords: fragmentation; invasive species; land use; macroscale; road ecology
Source: Web Of Science
Added: August 6, 2018

2018 article

In Nature, There Is Only Diversity

MBIO, Vol. 9.

By: M. McLaren n & B. Callahan n

author keywords: metagenomics; microbial ecology; microbiome
MeSH headings : Metagenomics; RNA, Ribosomal, 16S
Sources: Web Of Science, ORCID
Added: August 6, 2018

2018 journal article

Histamine as an emergent indoor contaminant: Accumulation and persistence in bed bug infested homes

PLOS ONE, 13(2), e0192462.

By: Z. DeVries n, R. Santangelo n, A. Barbarin* & C. Schal n

Ed(s): J. Benoit

MeSH headings : Air Pollution, Indoor / adverse effects; Animals; Bedbugs; Histamine / analysis; Hot Temperature; Humans; Insect Control; Pest Control
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2018 journal article

HT-eQTL: integrative expression quantitative trait loci analysis in a large number of human tissues

BMC Bioinformatics, 19.

By: G. Li, D. Jima, F. Wright & A. Nobel

Source: NC State University Libraries
Added: August 6, 2018

2018 journal article

Genetic Parameter Estimates for Metabolizing Two Common Pharmaceuticals in Swine

Frontiers in Genetics, 9(FEB).

author keywords: swine; pharmacogenomics; heritability; fenbendazole; flunixin meglumine
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2018 journal article

GTL1 and DF1 regulate root hair growth through transcriptional repression of ROOT HAIR DEFECTIVE 6-LIKE 4 in Arabidopsis

DEVELOPMENT, 145(3).

author keywords: Root hair; Cell growth; Trihelix transcription factor; Gene regulatory network
MeSH headings : Arabidopsis / genetics; Arabidopsis / growth & development; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Basic Helix-Loop-Helix Transcription Factors / genetics; Basic Helix-Loop-Helix Transcription Factors / metabolism; Gene Expression Regulation, Developmental; Gene Expression Regulation, Plant; Gene Regulatory Networks; Genes, Plant; Indoleacetic Acids / metabolism; Models, Biological; Mutation; Plant Growth Regulators / metabolism; Plant Roots / growth & development; Plant Roots / metabolism; Plants, Genetically Modified; Promoter Regions, Genetic; Signal Transduction; Transcription Factors / genetics; Transcription Factors / metabolism; Transcription, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018

2018 journal article

Dominant forest tree mycorrhizal type mediates understory plant invasions

ECOLOGY LETTERS, 21(2), 217–224.

author keywords: Eastern USA; forest mycorrhizal type; nutrient cycling; plant-soil feedback; temperate forests; understory invasions
MeSH headings : Ecosystem; Forests; Introduced Species; Mycorrhizae; Plants; Trees
Source: Web Of Science
Added: August 6, 2018

2018 journal article

Assessing the impact of the 4CL enzyme complex on the robustness of monolignol biosynthesis using metabolic pathway analysis

PLOS ONE, 13(3).

By: P. Naik n, J. Wang n, R. Sederoff n, V. Chiang n, C. Williams n & J. Ducoste n

MeSH headings : Biosynthetic Pathways; Homeostasis; Lignin / biosynthesis; Metabolic Networks and Pathways; Monte Carlo Method; Plant Proteins / metabolism; Populus / enzymology; Populus / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2018 journal article

An Attenuated Salmonella enterica Serovar Typhimurium Strain and Galacto-Oligosaccharides Accelerate Clearance of Salmonella Infections in Poultry through Modifications to the Gut Microbiome

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 84(5).

By: M. Azcarate-Peril*, N. Butz*, M. Cadenas*, M. Koci n, A. Ballou n, M. Mendoza n, R. Ali n, H. Hassan n

Ed(s): J. Schottel

author keywords: chicken gut microbiome; gut microbiome modulation; prebiotics
MeSH headings : Animals; Bacterial Vaccines / pharmacology; Chickens; Female; Gastrointestinal Microbiome / drug effects; Oligosaccharides / administration & dosage; Poultry Diseases / microbiology; Poultry Diseases / prevention & control; Prebiotics / administration & dosage; Random Allocation; Salmonella Infections, Animal / microbiology; Salmonella Infections, Animal / prevention & control; Salmonella typhimurium / immunology; Vaccines, Attenuated / pharmacology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2018 journal article

A survey of high dimension low sample size asymptotics

AUSTRALIAN & NEW ZEALAND JOURNAL OF STATISTICS, 60(1), 4–19.

author keywords: canonical correlations; classification; geometric representation; hypothesis testing; principal component analysis
Sources: Web Of Science, ORCID
Added: August 6, 2018