Genetics and Genomics Academy

Interdisciplinary Programs

Works Published in 2017

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Displaying works 121 - 140 of 566 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

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2017 journal article

Characterization and Exploitation of CRISPR Loci in Bifidobacterium longum

Frontiers in Microbiology, 8.

By: C. Hidalgo-Cantabrana  n, A. Crawley  n, B. Sanchez * & R. Barrangou n 

author keywords: CRISPR-Cas systems; genotyping; probiotics; Bifidobacterium longum
Source: ORCID
Added: January 3, 2020

2017 journal article

Repurposing CRISPR-Cas systems as DNA-based smart antimicrobials

Cell and Gene Therapy Insights, 3(1), 63–72.

By: R. Barrangou*  & D. Ousterout

Source: ORCID
Added: January 2, 2020

2017 article

Immune Loss as a Driver of Coexistence During Host-Phage Coevolution

Weissman, J. L., Holmes, R., Barrangou, R., Moineau, S., Fagan, W. F., Levin, B., & Johnson, P. L. F. (2017, February 3). (Vol. 2). Vol. 2.

By: J. Weissman *, R. Holmes*, R. Barrangou n , S. Moineau *, W. Fagan*, B. Levin *, P. Johnson *

Source: ORCID
Added: January 2, 2020

2017 journal article

QnAs with Rodolphe Barrangou

Proceedings of the National Academy of Sciences, 114(28), 7183–7184.

By: P. Nair

MeSH headings : Animals; Bacteria / virology; Biotechnology / history; Biotechnology / methods; Biotechnology / trends; CRISPR-Cas Systems; Drug Resistance, Bacterial; Food Contamination; Food Microbiology; Food Technology; Genotype; History, 21st Century; Livestock; Meat; Molecular Biology
Source: ORCID
Added: January 2, 2020

2017 journal article

On the global CRISPR array behavior in class I systems

Biology Direct.

By: A. Toms n & R. Barrangou n 

MeSH headings : CRISPR-Cas Systems / physiology; Chromosomes, Bacterial / chemistry; Datasets as Topic; Genome, Bacterial; Models, Genetic; Poisson Distribution; Software
Source: ORCID
Added: January 2, 2020

2017 journal article

Advances in Industrial Biotechnology Using CRISPR-Cas Systems

Trends in Biotechnology, 8(2), 134–146.

By: P. Donohoue *, R. Barrangou n  & A. May *

MeSH headings : Animals; Bacterial Proteins / genetics; Bacterial Proteins / metabolism; Biotechnology / methods; CRISPR-Associated Protein 9; CRISPR-Cas Systems; Endonucleases / genetics; Endonucleases / metabolism; Gene Editing / methods; Genetic Engineering / methods; Industrial Microbiology / methods; Metabolic Networks and Pathways / genetics; Plants / genetics; RNA, Guide, Kinetoplastida / genetics; RNA, Guide, Kinetoplastida / metabolism
Source: ORCID
Added: January 2, 2020

2017 journal article

Structural Position in the World System and Economic Growth, 1955-1970: A Multiple-Network Analysis of Transnational Interactions.

Perspectives on Global Development and Technology, 16(6), 81–117.

By: E. Kick, F. Tiezzi, D. Pena, N. Alexandratos, J. Bruinsma, M. Blalock Hubert, J. Diamond, i. fao ...

Source: ORCID
Added: December 31, 2019

2017 journal article

Food Production or Food Distribution: The Key to Global Food Security?

Perspectives on Global Development and Technology, 16(6), 666–682.

By: E. Kick n, F. Tiezzi  n & D. Pena n

author keywords: food production; food distribution; food security; modernization theory; world systems theory; dependency theory
Source: ORCID
Added: December 31, 2019

2017 journal article

A heuristic method to identify runs of homozygosity associated with reduced performance in livestock

Journal of Animal Science, 95(10), 4318–4332.

By: J. Howard  n, F. Tiezzi  n, Y. Huang, K. Gray & C. Maltecca n 

author keywords: inbreeding; runs of homozygosity; swine
MeSH headings : Algorithms; Animals; Computer Simulation; Female; Genome / genetics; Genomics; Haplotypes; Heuristics; Homozygote; Inbreeding; Linear Models; Linkage Disequilibrium; Male; Phenotype; Swine / genetics; Swine / physiology
Source: ORCID
Added: December 31, 2019

2017 journal article

Genotype by environment (climate) interaction improves genomic prediction for production traits in US Holstein cattle

Journal of Dairy Science, 100(3), 2042–2056.

By: F. Tiezzi, G. Los Campos, K. Gaddis & C. Maltecca

Source: ORCID
Added: December 31, 2019

2017 conference paper

Tracking 19th century late blight from archival documents using text analytics and geoparsing

Free and Open Source Software for Geospatial (FOSS4G) Conference Proceedings, 17(1), 17.

By: L. Tateosian, R. Guenter, Y. Yang & J. Ristaino 

Source: ORCID
Added: December 20, 2019

2017 report

A Risk Analysis of precision farming for tomato production

By: Y. Liu, M. Langemeier, I. Small, L. Joseph, W. Fry, J. Ristaino , A. Saville

Source: ORCID
Added: December 20, 2019

2017 conference paper

Evolutionary relatedness and sources of US lineages of Phytophthora infestans (Mont.) de Bary.

2017 APS Annual Meeting. Presented at the APSNET.

By: A. Saville & J. Ristaino 

Event: APSNET

Source: ORCID
Added: December 20, 2019

2017 conference paper

Charles Darwin and the Irish Potato Famine:“A Painfully Interesting Subject”

Charles Darwin and the Irish Potato Famine:“A Painfully Interesting Subject.” 2017 APS Annual Meeting. Presented at the APSNET.

By: J. Ristaino  & D. Pfister

Event: APSNET

Source: ORCID
Added: December 20, 2019

2017 conference paper

A species of Pestalotiopsis identified infecting red mangrove in The Bahamas

2017 APS Annual Meeting. Presented at the APSNET.

By: R. Rossi, C. Layman & J. Ristaino 

Event: APSNET

Source: ORCID
Added: December 20, 2019

2017 chapter

The triple response assay and its use to characterize ethylene mutants in arabidopsis

In Methods in Molecular Biology (Vol. 1573, pp. 163–209).

By: C. Merchante * & A. Stepanova n 

author keywords: Phytohormone; Ethylene; ACC; Triple response; Arabidopsis; Seedlings; Germination; Hypocotyl; Root; Apical hook; Mutants
MeSH headings : Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Biological Assay / methods; Ethylenes / metabolism; Ethylenes / pharmacology; Gene Expression Regulation, Plant / drug effects; Germination / drug effects; Germination / genetics; Mutation; Phenotype; Plant Growth Regulators / metabolism; Plant Growth Regulators / pharmacology; Seedlings / drug effects; Seedlings / genetics; Seedlings / metabolism
Source: ORCID
Added: December 19, 2019

2017 journal article

Editorial: Relevance of translational regulation on plant growth and environmental responses

Frontiers in Plant Science, 8.

By: A. Ferrando *, M. Castellano *, P. Lisón *, D. Leister *, A. Stepanova n  & J. Hanson *

author keywords: mRNA translation; translation factors; post-transcriptional regulation; translatome; organellar gene expression
Source: ORCID
Added: December 19, 2019

2017 chapter

The Predictive Power of Ecological Niche Modeling for Global Arbuscular Mycorrhizal Fungal Biogeography

In Biogeography of Mycorrhizal Symbiosis.

Source: ORCID
Added: December 19, 2019

2017 journal article

Brave new world

Biogeochemistry.

Source: ORCID
Added: December 19, 2019

2017 journal article

Regardless of N-substrate, multiple fungal root endophytes isolated from pastures outgrow and outcompete those isolated from undisturbed sites

Pedobiologia.

author keywords: Endophytes; Fungal traits; Competition; FL rosemary scrub; Pasture; Land use; Restoration
Source: ORCID
Added: December 19, 2019