Works Published in 2023

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Displaying works 1 - 20 of 630 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2023 journal article

FrameD: framework for DNA-based data storage design, verification, and validation

BIOINFORMATICS, 39(10).

TL;DR: FrameD fills a void in the tools publicly available to the DNA storage community by providing a modular and extensible framework with support for massive parallelism that will help accelerate the design process of future DNA-based storage systems. (via Semantic Scholar)
UN Sustainable Development Goal Categories
9. Industry, Innovation and Infrastructure (OpenAlex)
Source: Web Of Science
Added: April 8, 2024

2023 journal article

Understanding the Genotypic and Phenotypic Structure and Impact of Climate on <i>Phytophthora nicotianae</i> Outbreaks on Potato and Tomato in the Eastern United States

PHYTOPATHOLOGY, 113(8), 1506–1514.

By: A. Saville n, M. McGrath*, C. Jones n, J. Polo n & J. Ristaino n

author keywords: Phytophthora nicotianae; population genetics; potato; tomato
TL;DR: Multiple haplotypes within a field and the detection of both mating types in close proximity suggests that P. nicotianae may be reproducing sexually in North Carolina, suggesting that the thermotolerant P. Nicoleae may cause more disease as temperatures rise due to climate change. (via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action (OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: April 8, 2024

2023 journal article

The microbial-derived bile acid lithocholate and its epimers inhibit <i>Clostridioides difficile</i> growth and pathogenicity while sparing members of the gut microbiota

JOURNAL OF BACTERIOLOGY, 205(9).

By: S. Kisthardt n, R. Thanissery n, C. Pike n, M. Foley n & C. Theriot n

author keywords: lithocholate; Clostridioides difficile; epimers; secondary bile acids; gut microbiota
Source: Web Of Science
Added: April 8, 2024

2023 journal article

Tractidigestivibacter montrealensis</i> sp. nov., a new member of human gut microbiota isolated from a healthy volunteer

FEMS Microbiology Letters, 370.

By: M. Benlaïfaoui*, C. Richard*, A. Diop*, S. Naimi*, W. Belkaid*, E. Bernet*, F. Veyrier*, A. Elkrief* ...

Sources: ORCID, Crossref
Added: April 3, 2024

2023 journal article

Interlocus Gene Conversion, Natural Selection, and Paralog Homogenization

MOLECULAR BIOLOGY AND EVOLUTION, 40(9).

author keywords: interlocus gene conversion; paralog homogenization; teleost genome duplication
Sources: Web Of Science, ORCID
Added: April 1, 2024

2023 journal article

CTD tetramers: a new online tool that computationally links curated chemicals, genes, phenotypes, and diseases to inform molecular mechanisms for environmental health

TOXICOLOGICAL SCIENCES, 195(2), 155–168.

author keywords: database tool; chemical-disease pathway; molecular mechanisms; environmental health; knowledge gaps; adverse outcome pathway
Sources: Web Of Science, ORCID
Added: April 1, 2024

2023 journal article

Espalier: Efficient Tree Reconciliation and Ancestral Recombination Graphs Reconstruction Using Maximum Agreement Forests

SYSTEMATIC BIOLOGY, 72(5), 1154–1170.

By: D. Rasmussen n & F. Guo n

author keywords: Ancestral recombination graph; maximum agreement forest; phylogenetic discordance; recombination; reconciliation
UN Sustainable Development Goal Categories
15. Life on Land (OpenAlex)
Source: Web Of Science
Added: April 1, 2024

2023 article

Multi-signal regulation of the GSK-3β homolog Rim11 governs meiosis entry in yeast

Kociemba, J., Jørgensen, A. C. S., Tadic, N., Harris, A., Sideri, T., Chan, W. Y., … Werven, F. (2023, September 22).

By: J. Kociemba*, A. Jørgensen*, N. Tadic n, A. Harris*, T. Sideri*, W. Chan*, F. Ibrahim*, E. Ünal* ...

TL;DR: It is proposed that the signalling-regulatory network described here generates robustness in cell-fate control in meiosis by integrating multiple input signals to control Ume6 phosphorylation and EMG transcription. (via Semantic Scholar)
Source: ORCID
Added: April 1, 2024

2023 journal article

Plasma-activated water for inactivation of <i>Salmonella Typhimurium</i> avirulent surrogate: Applications in produce and shell egg and understanding the modes of action

LWT-FOOD SCIENCE AND TECHNOLOGY, 187.

By: Q. Wang n, S. Kathariou n & D. Salvi n

author keywords: Decontamination; Food safety; Food quality; Cold plasma; Reactive oxygen and nitrogen species
Source: Web Of Science
Added: March 25, 2024

2023 article

Identification of constrained sequence elements across 239 primate genomes

Kuderna, L. F. K., Ulirsch, J. C., Rashid, S., Ameen, M., Sundaram, L., Hickey, G., … Farh, K. K.-H. (2023, November 29). NATURE.

TL;DR: A whole-genome alignment of 239 species is constructed, representing nearly half of all extant species in the primate order and highlighting the important role of recent evolution in regulatory sequence elements differentiating primates, including humans, from other placental mammals. (via Semantic Scholar)
Source: Web Of Science
Added: March 25, 2024

2023 journal article

Maria Montoya

Inmunologia.

Contributors: E. Crisci

Source: ORCID
Added: March 8, 2024

2023 journal article

3-Component Approach to 1,5-Dihydro-2<i>H</i>-pyrrol-2-one Heterocycles

ORGANIC SYNTHESES, 100, 418-+.

By: N. Massaro* & J. Pierce

Sources: Web Of Science, ORCID
Added: March 4, 2024

2023 journal article

Transfer learning with false negative control improves polygenic risk prediction

PLOS GENETICS, 19(11).

Source: Web Of Science
Added: March 4, 2024

2023 article

Mini-Review: Enteric glia of the tumor microenvironment: An affair of corruption

Mariant, C. L., Bacola, G., & Van Landeghem, L. (2023, September 25). NEUROSCIENCE LETTERS, Vol. 814.

author keywords: Enteric glial cell; Colon cancer; Tumor microenvironment; Cancer stem cell; Intestinal stem cell
UN Sustainable Development Goal Categories
16. Peace, Justice and Strong Institutions (OpenAlex)
Source: Web Of Science
Added: March 4, 2024

2023 journal article

Delayed-release rapamycin halts progression of left ventricular hypertrophy in subclinical feline hypertrophic results of the RAPACAT trial

JAVMA-JOURNAL OF THE AMERICAN VETERINARY MEDICAL ASSOCIATION, 261(11), 1628–1637.

By: J. Kaplan*, V. Rivas n, A. Walker*, L. Grubb, A. Farrell, S. Fitzgerald, S. Kennedy, C. Pjauregui ...

author keywords: HCM; sirolimus; occult; cat; mTOR
TL;DR: It is demonstrated that DR rapamycin was well tolerated and may prevent or delay progressive LV hypertrophy in cats with subclinical HCM and no demographic, echocardiographic, or clinicopathologic values were significantly different between study groups at baseline, confirming successful randomization. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: March 4, 2024

2023 article

CRISPR Technology and its Many Applications with Select Examples Related to Animal Agriculture

Barrangou, R. (2023, May). JOURNAL OF ANIMAL SCIENCE, Vol. 101.

By: R. Barrangou n

TL;DR: The Barrangou talk will be an update on CRISPR technology and its many applications with select examples related to animal agriculture. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: March 4, 2024

2023 article

Human DOCK11 Deficiency Causes Defective Erythropoiesis and Systemic Inflammation

Block, J., Rashkova, C., Castanon, I., Platon, J., Zoghi, S., Fujiwara, M., … Boztug, K. (2023, November 2). BLOOD, Vol. 142.

By: J. Block*, C. Rashkova*, I. Castanon*, J. Platon*, S. Zoghi*, M. Fujiwara*, B. Chaves*, R. Schoppmeyer* ...

TL;DR: It is found that human DOCK11 regulates T-cell morphology and migration, suggesting that defects in Docks11 might impact the T cells' capability to fight infections and the immune dysregulation observed in the patients was uncovered. (via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: March 4, 2024

2023 journal article

Comparative transcriptome analysis reveals candidate genes for cold stress response and early flowering in pineapple

SCIENTIFIC REPORTS, 13(1).

By: A. Yow n, K. Laosuntisuk n, R. Young*, C. Doherty n, N. Gillitt, P. Perkins-Veazie n, Q. Jenny Xiang n, M. Iorizzo n

Sources: Web Of Science, NC State University Libraries
Added: February 26, 2024

2023 journal article

Bee species richness through time in an urbanizing landscape of the southeastern <scp>United States

Global Change Biology, 30(1).

UN Sustainable Development Goal Categories
11. Sustainable Cities and Communities (OpenAlex)
Source: Crossref
Added: February 24, 2024

2023 article

A Ratiometric Nonfluorescent CRISPR Assay Utilizing Cas12a-Induced Plasmid Supercoil Relaxation

Mohammad, N., Talton, L., Dalgan, S., & Wei, Q. (2023, December 5).

By: N. Mohammad n, L. Talton n, S. Dalgan n & Q. Wei n

TL;DR: A simple and robust ratiometric signaling strategy using CRISPR-Cas12a-induced supercoil relaxation of dsDNA plasmid reporters is developed, which solves the potential application limitations of previously demonstrated DNA sizing-based CRisPR-Dx without compromising the sensitivity. (via Semantic Scholar)
Source: ORCID
Added: February 22, 2024

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