Works Published in 2013

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Displaying works 1 - 20 of 139 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2013 conference paper

Understanding and predicting the adsorption of trace organic micropollutants by granular activated carbon

2013 Water Quality Technology Conference and Exposition, WQTC 2013. http://www.scopus.com/inward/record.url?eid=2-s2.0-84890451391&partnerID=MN8TOARS

By: A. Kennedy, A. Reinert, D. Knappe & R. Summers

Contributors: A. Kennedy, A. Reinert, D. Knappe & R. Summers

Source: ORCID
Added: September 9, 2023

2013 conference paper

The effect of background matrix and competition of GAC Adsorption of Carcinogenic VOCs in Natural Waters

2013 Water Quality Technology Conference and Exposition, WQTC 2013. http://www.scopus.com/inward/record.url?eid=2-s2.0-84890544639&partnerID=MN8TOARS

By: D. Kempisty, R. Summers & D. Knappe

Contributors: D. Kempisty, R. Summers & D. Knappe

Source: ORCID
Added: September 9, 2023

2013 journal article

Loss of hypoxia-inducible factor 2 alpha in the lung alveolar epithelium of mice leads to enhanced eosinophilic inflammation in cobalt-induced lung injury.

Toxicological Sciences : an Official Journal of the Society of Toxicology, 2.

By: S. Proper*, Y. Saini*, K. Greenwood*, L. Bramble, N. Downing & J. Lapres*

MeSH headings : Animals; Basic Helix-Loop-Helix Transcription Factors / deficiency; Basic Helix-Loop-Helix Transcription Factors / genetics; Bronchoalveolar Lavage Fluid / cytology; Cobalt / toxicity; Cytokines / genetics; Cytokines / immunology; Disease Models, Animal; Doxycycline / pharmacology; Gene Expression Profiling; Immunohistochemistry; Lung Injury / chemically induced; Lung Injury / complications; Lung Injury / immunology; Lung Injury / pathology; Mice; Mice, Knockout; Pulmonary Alveoli / drug effects; Pulmonary Alveoli / immunology; Pulmonary Alveoli / pathology; Pulmonary Eosinophilia / chemically induced; Pulmonary Eosinophilia / etiology; Pulmonary Eosinophilia / immunology; Pulmonary Eosinophilia / pathology; Respiratory Mucosa / drug effects; Respiratory Mucosa / immunology; Respiratory Mucosa / pathology
TL;DR: Results show that loss of HIF2α leads to enhanced eosinophilic inflammation and increased goblet cell metaplasia, and suggest that epithelial Hif2α signaling does play an important role in modulating the inflammatory and repair response in the lung. (via Semantic Scholar)
Source: ORCID
Added: August 2, 2023

2013 journal article

DNA Damage-Specific Control of Cell Death by Cryptochrome in p53-Mutant Ras-Transformed Cells

Cancer Research.

Contributors: J. Lee*, S. Gaddameedhi*, N. Ozturk*, R. Ye & A. Sancar*

MeSH headings : Animals; Cell Death / genetics; Cell Line; Cell Transformation, Neoplastic / genetics; Circadian Rhythm / genetics; Cryptochromes / genetics; Cryptochromes / physiology; DNA Damage; DNA-Binding Proteins / genetics; Doxorubicin / toxicity; Mice; Mice, Inbred C57BL; Mice, Knockout; Mutagens / toxicity; Mutation; Nuclear Proteins / genetics; Organoplatinum Compounds / toxicity; Oxaliplatin; Tumor Protein p73; Tumor Suppressor Proteins / genetics; Ultraviolet Rays / adverse effects
TL;DR: These findings establish distinct roles for cryptochromes in intrinsic apoptosis induced by UV mimetic and radiomimetic agents and Ras-transformed p53- and Cry-null mouse skin fibroblasts are more sensitive than p53 mutants to apoptotic cell death initiated by agents that activate either the intrinsic or the extrinsic apoptosis pathways. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Source: ORCID
Added: November 14, 2022

2013 journal article

Transposable elements re-wire and fine-tune the transcriptome.

9(1), 1003234.

MeSH headings : DNA Transposable Elements / genetics; Evolution, Molecular; Gene Expression Regulation; Genetic Variation; Humans; RNA, Messenger / genetics; Transcription, Genetic; Transcriptome / genetics
TL;DR: How TEs—particularly retrotransposons—contribute to transcript diversity and consider their potential significance as a source of small RNAs that regulate host gene transcription are explored. (via Semantic Scholar)
Source: ORCID
Added: September 28, 2022

2013 report

A Set of Scientific Issues Being Considered by the Environmental Protection Agency Regarding: Proposed Endocrine Disruptor Screening Program (EDSP) Tier 2 Ecotoxicity Tests

(SAP Minutes No. 2013-04). Environmental Protection Agency.

By: S. Kullman

Source: NC State University Libraries
Added: September 16, 2022

2013 journal article

Beliefs of science educators who teach pesticide risk to farmworkers

International Journal of Environmental and Science Education, 8(4), 587–609.

By: C. LePrevost, M. Blanchard & W. Cope

Source: NC State University Libraries
Added: September 16, 2022

2013 journal article

Short-Term Effects of Small Dam Removal on a Freshwater Mussel Assemblage

Freshwater Mollusk Biology and Conservation, 16(1), 41–52.

By: R. Heise*, W. Cope n, T. Kwak* & C. Eads n

UN Sustainable Development Goal Categories
14. Life Below Water (OpenAlex)
Sources: Crossref, ORCID
Added: September 15, 2022

2013 journal article

The Small GTPase Rsg1 is important for the cytoplasmic localization and axonemal dynamics of intraflagellar transport proteins.

Cilia.

Eric Brooks

TL;DR: The data suggest that Rsg1 is a regulator of multiple aspects of ciliogenesis, including apical trafficking of basal bodies and the localization and dynamics intraflagellar transport proteins. (via Semantic Scholar)
Source: ORCID
Added: March 23, 2022

2013 report

DBP Precursor and Micropollutant Removal by Powdered Activated Carbon

(Executive Summary No. 4294). Denver, Colorado: Water Research Foundation.

By: S. Dunn & D. Knappe

Source: NC State University Libraries
Added: December 24, 2021

2013 journal article

Nucleotide excision repair in human cells: fate of the excised oligonucleotide carrying DNA damage in vivo.

The Journal of Biological Chemistry.

Contributors: J. Hu*, J. Choi*, S. Gaddameedhi*, M. Kemp*, J. Reardon* & A. Sancar*

MeSH headings : Animals; Cell Line; DNA Damage; DNA Repair / radiation effects; DNA-Binding Proteins / metabolism; Humans; Models, Biological; Mutation / genetics; Oligonucleotides / metabolism; Pyrimidine Dimers / metabolism; Transcription Factor TFIIH / metabolism; Transcription, Genetic / radiation effects; Ultraviolet Rays
TL;DR: It is demonstrated that dual incisions occur in vivo identical to the in vitro reaction, and the congruence of in vivo and in vitro data on nucleotide excision repair in humans is shown. (via Semantic Scholar)
Source: ORCID
Added: December 24, 2021

2013 journal article

Highly specific and sensitive method for measuring nucleotide excision repair kinetics of ultraviolet photoproducts in human cells.

Nucleic Acids Research.

Shobhan Gaddameedhi

MeSH headings : Animals; Cell Line; Cricetinae; Cricetulus; DNA Repair; Humans; Kinetics; Luminescent Measurements / methods; Oligonucleotides; Pyrimidine Dimers / analysis; Ultraviolet Rays
TL;DR: The novel approach is robust, with essentially no signal in the absence of UV or a functional excision repair system, and allows for the sensitive detection of excision products within minutes following UV irradiation and does not require additional enrichment steps such as immunoprecipitation. (via Semantic Scholar)
Source: ORCID
Added: December 24, 2021

2013 journal article

WT UV-DDB Performs a 3D Search on DNA whereas the XP-E Mutant (K244E DDB2) Mutant Slides

Biophysical Journal, 104(2), 77a.

By: H. Ghodke*, H. Wang n, C. Hsieh*, G. Gibson*, S. Watkins*, V. Rapic-Otrin*, A. Levine*, B. Van Houten*

TL;DR: The results reveal the stoichiometry and search mechanism of UV-DDB in damage surveillance and are consistent with several salt-bridges observed in the co-crystal structure, which found that the mobility ofUV-D DB on DNA is salt dependent. (via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water (OpenAlex)
Sources: Crossref, ORCID
Added: December 12, 2021

2013 journal article

Investigating bioconjugation by atomic force microscopy

J. Nanobiotechnol, 11, 25.

By: I. Tessmer, P. Kaur, J. Lin & H. Wang

Source: ORCID
Added: September 23, 2021

2013 journal article

Real-time single-molecule imaging reveals a direct interaction between UvrC and UvrB on DNA tightropes

Nucleic Acids Research, gkt177.

By: C. Hughes, H. Wang, H. Ghodke, M. Simons, A. Towheed, Y. Peng, B. Van Houten, N. Kad

Source: ORCID
Added: September 23, 2021

2013 journal article

Maternally transferred mercury in wild largemouth bass, Micropterus salmoides

Environmental Pollution, 178, 493–497.

By: D. Sackett n, D. Aday n, J. Rice n & W. Cope n

author keywords: Mercury; Fish; Egg; Maternal transfer; Largemouth bass
MeSH headings : Animals; Bass / metabolism; Embryo, Nonmammalian / metabolism; Environmental Monitoring; Female; Mercury / metabolism; Reproduction; Water Pollutants, Chemical / metabolism
TL;DR: Higher maternal transfer is reported and higher ratios of egg to muscle tissue Hg (4-52%) and egg to whole body Hg concentrations (7-116%) than previously observed for teleost fish. (via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water (OpenAlex)
Sources: Crossref, ORCID
Added: August 16, 2021

2013 journal article

Nanomaterials as a potential cause of lung disease

Toxicology Letters, 221, S5.

By: J. Bonner n

UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Source: Crossref
Added: August 14, 2021

2013 journal article

The estrogenic content of rodent diets, bedding, cages, and water bottles and its effect on bisphenol a studies

Journal of the American Association for Laboratory Animal Science, 52(2), 130–141. http://www.scopus.com/inward/record.url?eid=2-s2.0-84875526300&partnerID=MN8TOARS

By: J. Thigpen, K. Setchell, G. Kissling, J. Locklear, G. Caviness, T. Whiteside, S. Belcher, N. Brown ...

Contributors: J. Thigpen, K. Setchell, G. Kissling, J. Locklear, G. Caviness, T. Whiteside, S. Belcher, N. Brown ...

Source: ORCID
Added: March 5, 2021

2013 journal article

PEG1/MEST and IGF2 DNA methylation in CIN and in cervical cancer

Clinical and Translational Oncology, 16(3), 266–272.

By: A. Vidal*, N. Henry*, S. Murphy*, O. Oneko*, M. Nye*, J. Bartlett*, F. Overcash*, Z. Huang* ...

author keywords: Insulin-like growth factor 2 gene (IGF2); Paternally expressed gene 1/mesoderm-specific transcript (PEG1/MEST); Human papillomavirus (HPV); Cervical intraepithelial neoplasia (CIN); Invasive cervical cancer (ICC); Differentially methylated regions (DMRs)
MeSH headings : Adult; DNA Methylation; Female; Humans; Insulin-Like Growth Factor II / genetics; Middle Aged; Papillomavirus Infections / complications; Papillomavirus Infections / genetics; Proteins / genetics; Uterine Cervical Neoplasms / genetics; Uterine Cervical Neoplasms / virology; Uterine Cervical Dysplasia / genetics; Uterine Cervical Dysplasia / virology
TL;DR: Findings show that altered DNA methylation at imprinted domains including IGF2/H19 and PEG1/MEST may mediate the association between HPV and ICC risk. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (OpenAlex)
Source: Crossref
Added: January 21, 2021

2013 journal article

Single Nucleotide Polymorphism (SNP) Detection and Genotype Calling from Massively Parallel Sequencing (MPS) Data

Statistics in Biosciences, 5(1), 3–25.

By: Y. Li*, W. Chen*, E. Liu* & Y. Zhou*

author keywords: Massively parallel sequencing; Next-generationsequencing; SNP detection; Genotype calling; Linkage disequilibrium (LD)
TL;DR: A review of statistical methods proposed in the past five years to detect SNPs and call genotypes at the detected polymorphic sites from the sequencing data, and discusses emerging issues and future directions related to SNP detection and genotype calling from MPS data. (via Semantic Scholar)
Source: Crossref
Added: December 21, 2020

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