Works Published in 2022
Displaying works 81 - 100 of 192 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2022 journal article
Environmental and Plant-Derived Controls on the Seasonality and Partitioning of Soil Respiration in an American Sycamore (Platanus occidentalis) Bioenergy Plantation Grown at Different Planting Densities
FORESTS, 13(8).
author keywords: soil CO2 efflux; heterotrophic respiration; autotrophic respiration; short-rotation woody crops; planting density; soil temperature; soil water content
www.mdpi.com (publisher PDF)
UN Sustainable Development Goal Categories
7. Affordable and Clean Energy
(Web of Science)
13. Climate Action
(Web of Science)
Source: Web Of Science
Added: September 6, 2022
2022 journal article
Grouping of UVCB Substances with Dose-Response Transcriptomics Data from Human Cell-Based Assays
ALTEX-ALTERNATIVES TO ANIMAL EXPERIMENTATION, 39(3), 388–404.
MeSH headings : Biological Assay; Endothelial Cells; Humans; Induced Pluripotent Stem Cells; Petroleum; Transcriptome
TL;DR:
The results further demonstrate the value of NAMs for grouping of UVCBs, identify informative cell lines, and provide data that could be used for justifying selection of substances for further testing that may be required for registration.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
11. Sustainable Cities and Communities
(Web of Science)
Source: Web Of Science
Added: August 29, 2022
2022 article
Effectiveness of the SMART Sex Ed program among 13-18 year old English and Spanish speaking adolescent men who have sex with men
Mustanski, B., Saber, R., Macapagal, K., Matson, M., Laber, E., Rodrgiuez-Diaz, C., … Newcomb, M. E. (2022, August 11). AIDS AND BEHAVIOR.
author keywords: Adolescent; MSM; HIV prevention; sexual health education; online
MeSH headings : Male; Humans; Adolescent; Homosexuality, Male; HIV Infections / epidemiology; HIV Infections / prevention & control; Sexual and Gender Minorities; Sexual Behavior; Safe Sex; Sexually Transmitted Diseases / prevention & control
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 29, 2022
2022 article
POPEYE intercellular localization mediates cell-specific iron deficiency responses
Muhammad, D. S., Clark, N. M., Haque, S., Williams, C. M., Sozzani, R., & Long, T. A. (2022, August 3). PLANT PHYSIOLOGY.
MeSH headings : Iron Deficiencies; Arabidopsis Proteins / metabolism; Gene Expression Regulation, Plant; Basic Helix-Loop-Helix Transcription Factors / metabolism; Arabidopsis / metabolism; Iron / metabolism; Plant Roots / genetics; Plant Roots / metabolism
TL;DR:
The findings indicate that PYE acts as a positive regulator of iron deficiency response by regulating iron bioavailability differentially across cells, which may trigger iron uptake from the surrounding rhizosphere and impact root energy metabolism.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science; OpenAlex)
Source: Web Of Science
Added: August 29, 2022
2022 journal article
Learning a deep dual-level network for robust DeepFake detection
PATTERN RECOGNITION, 130.
author keywords: DeepFake detection; Multitask learning; Imbalanced learning; AUC optimization
UN Sustainable Development Goal Categories
11. Sustainable Cities and Communities
(Web of Science)
16. Peace, Justice and Strong Institutions
(OpenAlex)
Sources: Web Of Science, ORCID
Added: August 15, 2022
2022 journal article
Model systems and organisms for addressing inter- and intra-species variability in risk assessment
REGULATORY TOXICOLOGY AND PHARMACOLOGY, 132.
MeSH headings : Animals; Mice; Models, Theoretical; Risk Assessment; Toxicokinetics; Uncertainty
TL;DR:
It is concluded that population-based models are now beginning to realize their potential to address long-standing data gaps in inter- and intra-species variability.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
11. Sustainable Cities and Communities
(Web of Science)
Source: Web Of Science
Added: August 15, 2022
2022 article
A general framework for subgroup detection via one-step value difference estimation
Johnson, D., Lu, W., & Davidian, M. (2022, August 2). BIOMETRICS, Vol. 8.
author keywords: exceptional law; optimal treatment rule; precision medicine; subgroup test; survival analysis; value function
TL;DR:
This work proposes a general framework for testing for the existence of a subgroup with enhanced treatment effects based on the difference of the estimated value functions under an estimated optimal treatment regime and a fixed regime that assigns everyone to the same treatment.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
16. Peace, Justice and Strong Institutions
(OpenAlex)
Sources: Web Of Science, ORCID
Added: August 15, 2022
2022 journal article
Correlation Analysis of Variables From the Atherosclerosis Risk in Communities Study
FRONTIERS IN PHARMACOLOGY, 13.
author keywords: cluster analysis; systems biology; meta-analysis as topic; ARIC; cardiovascular disease
TL;DR:
The data-driven approach can facilitate data harmonization and curation efforts by providing human annotators with groups of related variables reflecting the themes present in the data.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
4. Quality Education
(OpenAlex)
11. Sustainable Cities and Communities
(Web of Science)
Source: Web Of Science
Added: August 8, 2022
2022 journal article
Validity, consonant plausibility measures, and conformal prediction
INTERNATIONAL JOURNAL OF APPROXIMATE REASONING, 141, 110–130.
author keywords: Belief function; Coherence; Inferential model; Possibility measure; Random set
TL;DR:
This work establishes connections between Type-2 validity and coherence properties, and shows that imprecise probability considerations are required in order to achieve it, and goes on to show that both types of prediction validity can be achieved by interpreting the conformal prediction output as the contour function of a consonant plausibility measure.
(via Semantic Scholar)
Source: Web Of Science
Added: August 8, 2022
2022 journal article
Confidence bands and hypothesis tests for hit enrichment curves
JOURNAL OF CHEMINFORMATICS, 14(1).
author keywords: Virtual screening; Enrichment factor; Lift curve; Early enrichment; Ranking algorithm; Empirical process
TL;DR:
In virtual screening for drug discovery, hit enrichment curves are widely used to assess the performance of ranking algorithms with regard to their ability to identify early enrichment, and inferential procedures are developed to address both the needs of those interested in a few testing fractions, as well as the entire curve.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science; OpenAlex)
Source: Web Of Science
Added: August 8, 2022
2022 journal article
A Population-Based Human In Vitro Approach to Quantify Inter-Individual Variability in Responses to Chemical Mixtures
TOXICS, 10(8).
author keywords: population-wide; inter-individual variability; toxicodynamics; chemical mixtures; defined mixtures; human health risk assessment; uncertainty factors; genome-wide association study
TL;DR:
The data show that population variability of the mixtures is unlikely to exceed that of the most variable component, and that similarity in genome-wide associations among components may be used to accrue additional evidence for grouping of constituents in a mixture for cumulative assessments.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
11. Sustainable Cities and Communities
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 2, 2022
2022 journal article
JOINT INTEGRATIVE ANALYSIS OF MULTIPLE DATA SOURCES WITH CORRELATED VECTOR OUTCOMES
ANNALS OF APPLIED STATISTICS, 16(3), 1700–1717.
author keywords: Data integration; generalized method of moments; parallel computing; quadratic inference function; scalable computing; seemingly unrelated regression
TL;DR:
A data integration procedure for statistical estimation and inference of regression parameters that is implemented in a fully distributed and parallelized computational scheme and shows both theoretically and numerically that the proposed method yields efficiency improvements and is computationally fast.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science; OpenAlex)
Sources: Web Of Science, ORCID
Added: August 1, 2022
2022 journal article
Ten simple rules to host an inclusive conference.
PLoS Computational Biology, 7.
MeSH headings : COVID-19 / epidemiology; Humans; India; Italy; Pandemics; Writing
TL;DR:
10 simple rules to host an inclusive conference are introduced based on the authors’ recent experience organizing the 2021 edition of the useR! statistical computing conference, which attracted a broad range of participants from academia, industry, government, and the nonprofit sector.
(via Semantic Scholar)
Source: ORCID
Added: July 27, 2022
2022 article
CAPITAL: Optimal subgroup identification via constrained policy tree search
Cai, H., Lu, W., West, R. M., Mehrotra, D. V., & Huang, L. (2022, July 7). STATISTICS IN MEDICINE.
author keywords: constrained policy tree search; optimal subgroup identification; personalized medicine
MeSH headings : Algorithms; Humans; Policy; Precision Medicine / methods; Research Design
TL;DR:
This article presents an optimal subgroup selection rule (SSR) that maximizes the number of selected patients, and in the meantime, achieves the pre‐specified clinically meaningful mean outcome, such as the average treatment effect.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
16. Peace, Justice and Strong Institutions
(OpenAlex)
Source: Web Of Science
Added: July 26, 2022
2022 article
Numerical Tolerance for Spectral Decompositions of Random Matrices and Applications to Network Inference
Athreya, A., Lubberts, Z., Priebe, C. E., Park, Y., Tang, M., Lyzinski, V., … Lewis, B. W. (2022, July 18). JOURNAL OF COMPUTATIONAL AND GRAPHICAL STATISTICS.
author keywords: Optimal termination; Spectral decomposition; Statistical error
TL;DR:
It is demonstrated that terminating an eigendecomposition algorithm when the numerical error and statistical error are of the same order results in computational savings with no loss of accuracy.
(via Semantic Scholar)
Source: Web Of Science
Added: July 26, 2022
2022 article
Transformation-Invariant Learning of Optimal Individualized Decision Rules with Time-to-Event Outcomes
Zhou, Y., Wang, L., Song, R., & Zhao, T. (2022, June 28). JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, Vol. 6.
author keywords: Exceptional laws; Individualized decision rule; Inference; Precision medicine; Robust Method; Time-to-event data
TL;DR:
This work proposes a new robust framework for estimating an optimal static or dynamic IDR with time-to-event outcomes based on an easy-to-interpret quantile criterion and proves a novel result that the proposed approach can consistently estimate the optimal value function under mild conditions even when the optimal IDR is nonunique.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
16. Peace, Justice and Strong Institutions
(OpenAlex)
Sources: Web Of Science, ORCID
Added: July 11, 2022
2022 journal article
A Comparison of Infectious Disease Forecasting Methods across Locations, Diseases, and Time
PATHOGENS, 11(2).
author keywords: infectious disease forecasting; prediction; big data; multi-feature fusion; machine learning; deep learning; GLARMA; campylobacteriosis; typhoid; Q-fever
TL;DR:
The power of ML approaches to incorporate a wide range of factors to forecast various diseases, regardless of location, more accurately than traditional statistical approaches is demonstrated.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: July 11, 2022
2022 article
Popularity Adjusted Block Models are Generalized Random Dot Product Graphs
Koo, J., Tang, M., & Trosset, M. W. (2022, June 25). JOURNAL OF COMPUTATIONAL AND GRAPHICAL STATISTICS.
author keywords: Block models; Community detection; Generalized random dot product graphs; Network analysis; Sparse subspace clustering
TL;DR:
This work connects two random graph models by demonstrating that the PABM is a special case of the GRDPG in which communities correspond to mutually orthogonal subspaces of latent vectors and derives asymptotic properties of these algorithms.
(via Semantic Scholar)
Source: Web Of Science
Added: July 11, 2022
2022 article
TwinEQTL: ultrafast and powerful association analysis for eQTL and GWAS in twin studies
Xia, K., Shabalin, A. A., Yin, Z., Chung, W., Sullivan, P. F., Wright, F. A., … Zou, F. (2022, June 11). GENETICS.
author keywords: Twin; eQTL; GWAS
MeSH headings : Humans; Gene Frequency; Genome-Wide Association Study / methods; Linear Models; Polymorphism, Single Nucleotide; Quantitative Trait Loci
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: July 11, 2022
2022 article
Utilizing stratified generalized propensity score matching to approximate blocked randomized designs with multiple treatment levels
Corder, N., & Yang, S. (2022, June 20). JOURNAL OF BIOPHARMACEUTICAL STATISTICS, Vol. 6.
author keywords: causal inference; propensity score; matching; multiple treatments; stratification
MeSH headings : Child; Computer Simulation; Humans; Propensity Score; Prospective Studies; Research Design; Retrospective Studies
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID
Added: July 11, 2022
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