Works Published in 2007
Displaying works 161 - 177 of 177 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2007 journal article
Modeling the growth and death kinetics of Salmonella in poultry litter as a function of pH and water activity
POULTRY SCIENCE, 86(1), 191–201.
author keywords: Salmonella; mathematical modeling; litter; pH; water activity
MeSH headings : Animals; Floors and Floorcoverings; Hydrogen-Ion Concentration; Models, Biological; Salmonella / growth & development; Salmonella / isolation & purification; Time Factors; Turkeys / microbiology; Water / analysis; Water / chemistry
TL;DR:
The use of a single equation to predict the growth and decline of Salmonella populations as a function of pH and A(w) has potential application for use in the development of effective pathogen control strategies at the farm level.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2007 journal article
Mapping resistance to Southern rust in a tropical by temperate maize recombinant inbred topcross population
THEORETICAL AND APPLIED GENETICS, 114(4), 659–667.
MeSH headings : Basidiomycota; Chromosome Mapping; Crosses, Genetic; Environment; Immunity, Innate / genetics; Microsatellite Repeats / genetics; Plant Diseases / genetics; Plant Diseases / microbiology; Quantitative Trait Loci; Tropical Climate; Zea mays
TL;DR:
Resistance was simply inherited in this population and the major QTL is likely a dominant resistant gene that is independent of plant maturity, which would be desirable if the resistance alleles maintained resistance across environments while not increasing plant maturity.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018
2007 journal article
Hydrographics and the timing of infectious salmon anemia outbreaks among Atlantic salmon (Salmo salar L.) farms in the Quoddy region of Maine, USA and New Brunswick, Canada
PREVENTIVE VETERINARY MEDICINE, 78(1), 35–56.
author keywords: infectious salmon anemia; Atlantic salmon; epidemiology; hydrographics; spatio-temporal; time-series cross-sectional regression
MeSH headings : Animals; Aquaculture; Cohort Studies; Disease Outbreaks / veterinary; Fish Diseases / epidemiology; Fish Diseases / transmission; Fish Diseases / virology; Incidence; Isavirus / growth & development; Longitudinal Studies; Maine / epidemiology; New Brunswick / epidemiology; Orthomyxoviridae Infections / epidemiology; Orthomyxoviridae Infections / transmission; Orthomyxoviridae Infections / veterinary; Orthomyxoviridae Infections / virology; Proportional Hazards Models; Retrospective Studies; Salmo salar; Statistics, Nonparametric; Time Factors; Water Microbiology; Water Movements
TL;DR:
It is suggested that tidal dispersion does play a role in ISAV transmission in the Quoddy region, and dispersion of free virus and/or tidal distribution of lice or other hydrographically influenced vectors or fomites could all contribute to the spatio-temporal patterns described.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
14. Life Below Water
(OpenAlex)
Source: Web Of Science
Added: August 6, 2018
2007 journal article
Detecting differential expressions in GeneChip microarray studies: A quantile approach
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 102(477), 104–112.
author keywords: gene expression; microarray data; quantile regression; random effect; rank score test
TL;DR:
The methodology proposed is a first attempt to develop inferential tools for quantile regression in mixed models and shows that detecting differences in the quartiles for the probe level data is a valuable complement to the usual mixed model analysis based on Gaussian likelihood.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2007 journal article
Controlling variable selection by the addition of pseudovariables
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 102(477), 235–243.
author keywords: false selection rate; forward selection; model error; model selection; subset selection
citeseerx.ist.psu.edu (repository)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2007 journal article
Approximate likelihood for large irregularly spaced spatial data
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 102(477), 321–331.
author keywords: Anisotropy; covariance; Fourier transform; periodogram; satellite data; sea surface temperatures; spatial likelihood; spatial statistics
TL;DR:
A version of Whittle's approximation to the Gaussian log-likelihood for spatial regular lattices with missing values and for irregularly spaced datasets, which requires O(nlog2n) operations and does not involve calculating determinants.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
14. Life Below Water
(OpenAlex)
Source: Web Of Science
Added: August 6, 2018
2007 journal article
A tabu search algorithm for maximum parsimony phylogeny inference
EUROPEAN JOURNAL OF OPERATIONAL RESEARCH, 176(3), 1908–1917.
author keywords: tabu search; OR in biology; bioinformatics; phylogeny inference; maximum parsimony
TL;DR:
The parsimony principle is adopted and a tabu search algorithm is designed for finding a most parsimonious phylogeny tree and it generates much more accurate results than the default options of the program “dnapars” (heuristic search based).
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2007 journal article
A dynamic model for induced reactivation of latent virus
JOURNAL OF THEORETICAL BIOLOGY, 244(3), 451–462.
author keywords: reactivation of latent virus; mathematical model; KSHV; Herpes virus
MeSH headings : Butyrates / pharmacology; Cell Cycle; Cell Death; Cell Line, Tumor; DNA Replication; DNA, Viral / physiology; Herpesvirus 8, Human / physiology; Humans; Lymphoma / pathology; Lymphoma / virology; Models, Biological; Models, Statistical; Virus Activation; Virus Latency / drug effects
TL;DR:
A deterministic mathematical model is developed to describe reactivation of latent virus by chemical inducers and provides good agreement with two independent sets of experimental data, but also points to the need for a new class of experiments which are required for further understanding of the underlying mechanisms.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2007 journal article
Prediction of surface uniformity in woven fabrics through 2-D anisotropy measures, Part II: Simulation and verification of the prediction model
JOURNAL OF THE TEXTILE INSTITUTE, 98(2), 117–126.
author keywords: variance-area curves; anisotropy; surface uniformity; simulation
UN Sustainable Development Goal Categories
12. Responsible Consumption and Production
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2007 journal article
Prediction of surface uniformity in woven fabrics through 2-D anisotropy measures, Part I: Definitions and theoretical model
JOURNAL OF THE TEXTILE INSTITUTE, 98(2), 109–116.
author keywords: variance-area curves; anisotropy; surface uniformity
Source: Web Of Science
Added: August 6, 2018
2007 journal article
Estimation and prediction with HIV-treatment interruption data
BULLETIN OF MATHEMATICAL BIOLOGY, 69(2), 563–584.
author keywords: HIV models; treatment interruptions; censored data; parameter estimation; prediction
MeSH headings : Antiretroviral Therapy, Highly Active / methods; CD4 Lymphocyte Count; Cohort Studies; Data Interpretation, Statistical; Drug Administration Schedule; HIV Infections / drug therapy; HIV Infections / immunology; HIV-1; Humans; Longitudinal Studies; Models, Biological; Predictive Value of Tests; Viral Load
TL;DR:
This work uses a nonlinear dynamical mathematical model in attempts to fit individual patient data for HIV patients undergoing treatment interruptions using a statistically-based censored data method and inverse problem techniques to estimate dynamic parameters.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018
2007 journal article
Molecular architecture of the DNA-binding region and its relationship to classification of basic helix-loop-helix proteins
MOLECULAR BIOLOGY AND EVOLUTION, 24(1), 192–202.
author keywords: computational biology; bHLH proteins; molecular architecture; multivariate statistics; DNA-binding specificity; molecular evolution
MeSH headings : Animals; Basic Helix-Loop-Helix Transcription Factors / chemistry; Basic Helix-Loop-Helix Transcription Factors / classification; Basic Helix-Loop-Helix Transcription Factors / genetics; Basic Helix-Loop-Helix Transcription Factors / metabolism; Binding Sites; Codon / genetics; DNA / metabolism; Dimerization; Humans; Hydrophobic and Hydrophilic Interactions; Protein Structure, Secondary; Protein Structure, Tertiary; Static Electricity
TL;DR:
Using multivariate statistical analyses, discriminant analyses describe the multidimensional aspects of physiochemical variation and clarify the structural basis of the prevailing evolutionary classification of basic helix-loop-helix proteins.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
10. Reduced Inequalities
(OpenAlex)
Source: Web Of Science
Added: August 6, 2018
2007 journal article
Evolutionary model selection with a genetic algorithm: A case study using stem RNA
MOLECULAR BIOLOGY AND EVOLUTION, 24(1), 159–170.
author keywords: RNA sequence evolution; secondary structure; model selection; genetic algorithms; multimodel inference
MeSH headings : Algorithms; Animals; Computational Biology; Evolution, Molecular; HIV / genetics; Invertebrates / genetics; Likelihood Functions; Mammals / genetics; Models, Genetic; Nucleic Acid Conformation; RNA / chemistry; RNA / genetics; Response Elements; Sequence Alignment
TL;DR:
This work describes a likelihood-based approach for evolutionary model selection that allows, for the first time, to evaluate the performance of existing RNA evolutionary models by comparing them with a large pool of candidate models and to validate common modeling assumptions.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2007 journal article
eQTL Viewer: visualizing how sequence variation affects genome-wide transcription
BMC Bioinformatics, 8(7).
Source: NC State University Libraries
Added: August 6, 2018
2007 journal article
Field-driven biofunctionalization of polymer fiber surfaces during electrospinning
ADVANCED MATERIALS, 19(1), 87-+.
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018
2007 journal article
Differential attraction of Heliothis subflexa males to synthetic pheromone lures in eastern US and western Mexico
JOURNAL OF CHEMICAL ECOLOGY, 33(2), 353–368.
author keywords: sexual communication; pheromone; pheromone component; geographic variation; acetate esters; 16-carbon alcohol; 14-carbon aldehydes; dose-response; minimal blend; complete blend
MeSH headings : Acetates / chemistry; Animal Communication; Animals; Dose-Response Relationship, Drug; Male; Mexico; Moths; Sex Attractants / chemical synthesis; Sex Attractants / chemistry; Sex Attractants / pharmacology; Sexual Behavior, Animal; United States
TL;DR:
The mate attraction signal of Heliothis subflexa (Hs) females consists of a multicomponent sex pheromone blend, and it is indicated that the addition of Z9-16:OAc alone does not increase attraction of male Hs, while Z11-16-OAc does.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2007 journal article
Comparison of statistical performance of univariate and bivariate mixed models for Affymetrix (R) probe level data
JOURNAL OF STATISTICAL COMPUTATION AND SIMULATION, 77(3), 251–264.
author keywords: Affymetrix (R); mixed model; bivariate model; perfect match probes; mismatch probes
TL;DR:
It is shown that the bivariate mixed model offers moderate gains in power over a comparable univariate model that ignores the MM data, and is more prominent when the number of replicates and the array-to-array variability is small.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
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