Microbiology

College of Agriculture and Life Sciences

Works Published in 2021

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Displaying works 1 - 20 of 26 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2021 journal article

Role of the Mn-Catalase in Aerobic Growth of Lactobacillus plantarum ATCC 14431

Applied Microbiology.

Source: ORCID
Added: December 21, 2021

2021 journal article

Mechanisms of Colonization Resistance Against Clostridioides difficile

JOURNAL OF INFECTIOUS DISEASES, 223, S194–S200.

By: C. Pike n & C. Theriot n

author keywords: bacteria; bile acids; Clostridioides difficile; microbiota; short-chain fatty acids
MeSH headings : Animals; Anti-Bacterial Agents / immunology; Anti-Bacterial Agents / metabolism; Anti-Bacterial Agents / therapeutic use; Antibiosis; Bile Acids and Salts / immunology; Bile Acids and Salts / metabolism; Clostridioides difficile / drug effects; Clostridioides difficile / growth & development; Clostridioides difficile / metabolism; Clostridium Infections / drug therapy; Clostridium Infections / immunology; Clostridium Infections / microbiology; Fatty Acids, Volatile / immunology; Fatty Acids, Volatile / metabolism; Gastrointestinal Microbiome / drug effects; Gastrointestinal Microbiome / physiology; Humans; Nutrients / immunology; Nutrients / metabolism
Source: Web Of Science
Added: October 18, 2021

2021 article

A Liquid Metal Mediated Metallic Coating for Antimicrobial and Antiviral Fabrics

Kwon, K. Y., Cheeseman, S., Frias-De-Diego, A., Hong, H., Yang, J., Jung, W., … Kim, T.-il. (2021, September 22). ADVANCED MATERIALS.

By: K. Kwon n, S. Cheeseman*, A. Frias-De-Diego n, H. Hong*, J. Yang n, W. Jung*, H. Yin*, B. Murdoch* ...

author keywords: antimicrobial; antiviral; galvanic replacement; liquid metal fabric coating
MeSH headings : Alloys / chemistry; Anti-Infective Agents / chemistry; Anti-Infective Agents / pharmacology; Antiviral Agents / chemistry; Antiviral Agents / pharmacology; Bacteria / drug effects; Coated Materials, Biocompatible / chemistry; Coated Materials, Biocompatible / pharmacology; Copper / chemistry; Fungi / drug effects; Gallium / chemistry; Textiles / analysis; Viruses / drug effects
Source: Web Of Science
Added: October 4, 2021

2021 journal article

Identification of Putative Biosynthetic Gene Clusters for Tolyporphins in Multiple Filamentous Cyanobacteria

LIFE-BASEL, 11(8).

By: X. Jin n, Y. Zhang n, R. Zhang n, K. Nguyen n, J. Lindsey n & E. Miller n

author keywords: tolyporphins; tetrapyrroles; cyanobacteria; biosynthetic gene cluster; Brasilonema; Nostoc; Oculatella
Sources: Web Of Science, ORCID
Added: September 7, 2021

2021 journal article

Toward Universal Photodynamic Coatings for Infection Control

FRONTIERS IN MEDICINE, 8.

By: C. Ghareeb n, B. Peddinti n, S. Kisthardt n, F. Scholle n, R. Spontak n & R. Ghiladi n

author keywords: antimicrobial; Coronavirus; coatings; photodynamic inactivation; photosensitizer; polymer; singlet oxygen; Staphylococcus aureus
Source: Web Of Science
Added: August 23, 2021

2021 journal article

A double-blind, 377-subject randomized study identifies Ruminococcus, Coprococcus, Christensenella, and Collinsella as long-term potential key players in the modulation of the gut microbiome of lactose intolerant individuals by galacto-oligosaccharides

GUT MICROBES, 13(1).

By: M. Azcarate-Peril*, J. Roach*, A. Marsh*, W. Chey*, W. Sandborn*, A. Ritter, D. Savaiano*, T. Klaenhammer n

author keywords: Prebiotics; microbiome modulation; lactose intolerance; human lactase; Bifidobacterium; short chain fatty acids; galacto-oligosaccharides; GOS
MeSH headings : Actinobacteria / classification; Actinobacteria / genetics; Actinobacteria / isolation & purification; Clostridiales / classification; Clostridiales / genetics; Clostridiales / isolation & purification; Double-Blind Method; Gastrointestinal Microbiome / physiology; Humans; Lactobacillus / growth & development; Lactobacillus / metabolism; Lactose Intolerance / microbiology; Oligosaccharides / administration & dosage; Oligosaccharides / metabolism; Placebos / administration & dosage; Prebiotics / administration & dosage; RNA, Ribosomal, 16S / genetics
Source: Web Of Science
Added: August 16, 2021

2021 journal article

Temperature and solvent exposure response of three fatty acid peroxygenase enzymes for application in industrial enzyme processes

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 571, 60–65.

author keywords: Hydrogen peroxide; Cytochrome P450 (CYP450); Peroxygenases; Biocatalysis; OleT; CYP152K6
MeSH headings : Acetone / chemistry; Acetone / metabolism; Bacillus / enzymology; Dimethylformamide / chemistry; Dimethylformamide / metabolism; Fatty Acids / metabolism; Mixed Function Oxygenases / metabolism; Solvents / chemistry; Solvents / metabolism; Temperature
Sources: ORCID, Web Of Science
Added: July 23, 2021

2021 journal article

Repurposing the Ebola and Marburg Virus Inhibitors Tilorone, Quinacrine, and Pyronaridine: In Vitro Activity against SARS-CoV-2 and Potential Mechanisms

ACS OMEGA, 6(11), 7454–7468.

Source: Web Of Science
Added: June 10, 2021

2021 review

Leveraging Pseudomonas Stress Response Mechanisms for Industrial Applications

[Review of ]. FRONTIERS IN MICROBIOLOGY, 12.

By: K. Craig*, B. Johnson* & A. Grunden n

author keywords: stress; Pseudomonas; formulation; heat; desiccation; cold; biofilm; chaperone
Sources: Web Of Science, ORCID
Added: June 10, 2021

2021 journal article

Natural Product Gene Clusters in the Filamentous Nostocales Cyanobacterium HT-58-2

LIFE-BASEL, 11(4).

By: X. Jin n, E. Miller n & J. Lindsey n

author keywords: anatoxin-a; homoanatoxin-a; hapalosin; heterocyst glycolipids; natural products; secondary metabolites; shinorine; tolypodiols; tolyporphins
Sources: Web Of Science, ORCID
Added: May 17, 2021

2021 journal article

In situ H2O2 generation methods in the context of enzyme biocatalysis

ENZYME AND MICROBIAL TECHNOLOGY, 145.

author keywords: Hydrogen peroxide; Peroxidases; Unspecific peroxygenases; Biocatalysis
MeSH headings : Biocatalysis; Heme; Hydrogen; Hydrogen Peroxide
Sources: Web Of Science, ORCID
Added: April 19, 2021

2021 journal article

Safety and Modulatory Effects of Humanized Galacto-Oligosaccharides on the Gut Microbiome

FRONTIERS IN NUTRITION, 8.

author keywords: galactooligosaccharide (GOS); N-Acetyl-D-lactosamine (LacNAc); safety; human milk oligosaccharides (HMOs); LacNAc synthesis; mouse models
Sources: ORCID, Web Of Science
Added: April 9, 2021

2021 journal article

Rapid and Repetitive Inactivation of SARS-CoV-2 and Human Coronavirus on Self-Disinfecting Anionic Polymers

ADVANCED SCIENCE, 8(11).

By: B. Peddinti n, S. Downs*, J. Yan n, S. Smith*, R. Ghiladi n, V. Mhetar*, R. Tocchetto*, A. Griffiths*, F. Scholle n, R. Spontak n

author keywords: antiviral materials; charged block polymers; microphase‐ ordered materials; polyanions; thermoplastic elastomers
MeSH headings : COVID-19 / prevention & control; COVID-19 / transmission; COVID-19 / virology; Disinfectants / therapeutic use; Humans; Pandemics; Polymers / chemistry; Polymers / therapeutic use; SARS-CoV-2 / drug effects; SARS-CoV-2 / pathogenicity
Source: Web Of Science
Added: April 5, 2021

2021 journal article

In Vivo Transcriptome of Lactobacillus acidophilus and Colonization Impact on Murine Host Intestinal Gene Expression

MBIO, 12(1).

author keywords: Lactobacillus; acidophilus; gut adaptation; in vivo gene expression; mouse colonization; probiotic
MeSH headings : Animals; Bacterial Adhesion; Bacterial Proteins / genetics; Gene Expression Profiling; Host Microbial Interactions / genetics; Immunity; Intestines / microbiology; Lactobacillus acidophilus / genetics; Lactobacillus acidophilus / physiology; Mice; Probiotics / administration & dosage; Sequence Analysis, RNA; Signal Transduction; Transcriptome
Source: Web Of Science
Added: April 5, 2021

2021 journal article

Secondary bile acid ursodeoxycholic acid alters weight, the gut microbiota, and the bile acid pool in conventional mice

PLOS ONE, 16(2).

MeSH headings : Animals; Body Weight / drug effects; Cecum / microbiology; Feces / microbiology; Female; Gastrointestinal Microbiome / drug effects; Ileum / microbiology; Male; Metabolome / drug effects; Mice, Inbred C57BL; Receptors, Cytoplasmic and Nuclear / metabolism; Receptors, G-Protein-Coupled / metabolism; Ursodeoxycholic Acid / administration & dosage; Ursodeoxycholic Acid / pharmacology; Weight Loss / drug effects
Source: Web Of Science
Added: March 22, 2021

2021 article

The pleiotropic effects of prebiotic galacto-oligosaccharides on the aging gut (vol 9, 31, 2021)

Arnold, J. W., Roach, J., Fabela, S., Moorfield, E., Ding, S., Blue, E., … Azcarate-Peril, M. A. (2021, February 26). MICROBIOME, Vol. 9.

By: J. Arnold*, J. Roach*, S. Fabela*, E. Moorfield*, S. Ding*, E. Blue*, S. Dagher n, S. Magness n ...

Sources: Web Of Science, ORCID
Added: March 22, 2021

2021 journal article

Structure, Function, and Thermal Adaptation of the Biotin Carboxylase Domain Dimer from Hydrogenobacter thermophilus 2-Oxoglutarate Carboxylase

BIOCHEMISTRY, 60(4), 324–345.

By: G. Buhrman n, P. Enriquez n, L. Dillard n, H. Baer n, V. Truong n, A. Grunden n, R. Rose n

MeSH headings : Bacteria / enzymology; Bacterial Proteins / chemistry; Carbon-Nitrogen Ligases / chemistry; Crystallography, X-Ray; Enzyme Stability; Hot Temperature; Protein Domains; Structure-Activity Relationship
Sources: Web Of Science, ORCID
Added: March 15, 2021

2021 review

Contribution of Inhibitory Metabolites and Competition for Nutrients to Colonization Resistance against Clostridioides difficile by Commensal Clostridium

[Review of ]. MICROORGANISMS, 9(2).

By: A. Reed n & C. Theriot n

author keywords: Clostridioides difficile; Clostridium scindens; secondary bile acids; deconjugation; dehydroxylation; epimerization; short-chain fatty acids; proline; hydroxyproline
Source: Web Of Science
Added: March 15, 2021

2021 journal article

Lactobacillus bile salt hydrolase substrate specificity governs bacterial fitness and host colonization

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 118(6).

author keywords: Lactobacillus; Acidophilus; gasseri; bile salt hydrolase; bile acid
MeSH headings : Amidohydrolases / genetics; Amidohydrolases / metabolism; Ecosystem; Gastrointestinal Microbiome / genetics; Gastrointestinal Microbiome / physiology; Genetic Fitness / genetics; Host-Pathogen Interactions / genetics; Humans; Lactobacillus / enzymology; Lactobacillus / genetics; Probiotics / pharmacology; Substrate Specificity / genetics
Source: Web Of Science
Added: March 15, 2021

2021 journal article

Photodynamic Coatings on Polymer Microfibers for Pathogen Inactivation: Effects of Application Method and Composition

ACS APPLIED MATERIALS & INTERFACES, 13(1), 155–163.

By: B. Peddinti n, N. Morales-Gagnon n, B. Pourdeyhimi n, F. Scholle n, R. Spontak n & R. Ghiladi n

author keywords: hospital-acquired infections; photodynamic coatings; porphyrin photosensitizer; SARS-CoV-2 virus; polymer microfibers
MeSH headings : COVID-19 / prevention & control; COVID-19 / virology; Escherichia coli / drug effects; Escherichia coli / pathogenicity; Humans; Iatrogenic Disease / prevention & control; Light; Methicillin-Resistant Staphylococcus aureus / drug effects; Methicillin-Resistant Staphylococcus aureus / pathogenicity; Microfibrils / chemistry; Pandemics; Photosensitizing Agents / chemistry; Photosensitizing Agents / pharmacology; Polymers / chemistry; Polymers / pharmacology; Porphyrins / chemistry; Porphyrins / pharmacology; SARS-CoV-2 / drug effects; SARS-CoV-2 / pathogenicity; Singlet Oxygen
Source: Web Of Science
Added: March 15, 2021