College of Agriculture and Life Sciences

Works Published in 2023

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Displaying all 8 works

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2023 journal article

Trimming and Decontamination of Metagenomic Data can Significantly Impact Assembly and Binning Metrics, Phylogenomic and Functional Analysis


By: J. Whitham n & A. Grunden n

author keywords: Trimming; decontamination; binning; assembly; metagenomics; MAG; QC; accessibility
Sources: Web Of Science, ORCID
Added: August 28, 2023

2023 journal article

Intestinal bile acids provide a surmountable barrier against C. difficile TcdB-induced disease pathogenesis


By: S. Icho*, J. Ward*, J. Tam*, L. Kociolek*, C. Theriot n & R. Melnyk*

author keywords: toxin; host; C; difficile; pathogenesis; bile acid
MeSH headings : Humans; Mice; Animals; Bacterial Toxins; Clostridioides difficile; Bile Acids and Salts; Clostridium Infections / pathology; Intestines / pathology; Bacterial Proteins
Source: Web Of Science
Added: August 21, 2023

2023 journal article

Pharmacogenomic Analyses Implicate B Cell Developmental Status and MKL1 as Determinants of Sensitivity toward Anti-CD20 Monoclonal Antibody Therapy

CELLS, 12(12).

By: G. Small*, F. Akhtari*, A. Green n, T. Havener*, M. Sikes n, J. Quintanhila, R. Gonzalez*, D. Reif* ...

author keywords: rituximab (Rituxan (R)); ofatumumab (Arzerra (R),& nbsp;Kesimpta (R)); obinutuzumab (Gazyva (R)); CD20 (MS4A1); MKL1 (MRTFA); TGFB1
Source: Web Of Science
Added: August 7, 2023

2023 journal article

Biochemical characterization of a psychrophilic and halotolerant a-carbonic anhydrase from a deep-sea bacterium, Photobacterium profundum

AIMS MICROBIOLOGY, 9(3), 540–553.

By: V. Somalinga*, E. Foss* & A. Grunden n

author keywords: Photobacterium profundum; a-carbonic anhydrase; halotolerance; biomineralization; carbon capture
Sources: Web Of Science, ORCID
Added: July 19, 2023

2023 journal article

Survivability of Salmonella Typhimurium (ATCC 14208) and Listeria innocua (ATCC 51742) on lignocellulosic materials for paper packaging

HELIYON, 9(3).

By: J. Zwilling*, J. Whitham*, F. Zambrano, A. Pifano*, A. Grunden*, H. Jameel*, R. Venditti*, R. Gonzalez*

author keywords: Lignocellulosic; Food safety; Paper; Survivability; Bacteria; Packaging
Sources: Web Of Science, ORCID
Added: May 9, 2023

2023 article

Nitrogen Fixation and Ammonium Assimilation Pathway Expression of Geobacter sulfurreducens Changes in Response to the Anode Potential in Microbial Electrochemical Cells

Ortiz-Medina, J. F., Poole, M. R., Grunden, A. M., & Call, D. F. (2023, March 28). APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Vol. 3.

author keywords: electromicrobiology; Geobacter; nitrogen fixation
MeSH headings : Nitrogen Fixation; Ammonium Compounds / metabolism; Geobacter / metabolism; Electrodes; Nitrogenase / metabolism; Nitrogen / metabolism
Sources: Web Of Science, ORCID
Added: April 11, 2023

2023 article

Streptomyces spp. as biocatalyst sources in pulp and paper and textile industries: Biodegradation, bioconversion and valorization of waste

Cuebas-Irizarry, M. F., & Grunden, A. M. (2023, April 5). MICROBIAL BIOTECHNOLOGY, Vol. 4.

Sources: ORCID, Web Of Science
Added: April 6, 2023

2023 article

Bile salt hydrolases shape the bile acid landscape and restrict Clostridioides difficile growth in the murine gut

Foley, M. H., Walker, M. E., Stewart, A. K., O'Flaherty, S., Gentry, E. C., Patel, S., … Theriot, C. M. (2023, March 13). NATURE MICROBIOLOGY.

MeSH headings : Animals; Mice; Humans; Clostridioides difficile; Clostridioides; Bile Acids and Salts; Amidohydrolases; Clostridium Infections
Source: Web Of Science
Added: April 4, 2023