Plant and Microbial Biology - 2015

Call, A., Sun, Y.-X., Yu, Y., Pearman, P. B., Thomas, D. T., Trigiano, R. N., … Xiang, Q.-Y. J. (2015). Genetic structure and post-glacial expansion ofCornus floridaL. (Cornaceae): integrative evidence from phylogeography, population demographic history, and species distribution modeling. Journal of Systematics and Evolution, 54(2), 136–151. https://doi.org/10.1111/jse.12171

Carson, S., Bruff, E., DeFoor, W., Dums, J., Groth, A., Hatfield, T., … Miller, E. S. (2015). Genome Sequences of Six Paenibacillus larvae Siphoviridae Phages. Genome Announcements, 3(3). https://doi.org/10.1128/genomea.00101-15

Hines, K. M., Krings, A., & Stucky, J. M. (2015). Guide to the vascular flora of Howell Woods (Johnston County, North Carolina, U.S.A.). Ft. Worth, Texas: Botanical Research Institute of Texas Press.

Hu, Q., Merchante, C., Stepanova, A. N., Alonso, J. M., & Heber, S. (2015). A Stacking-Based Approach to Identify Translated Upstream Open Reading Frames in Arabidopsis Thaliana. In Bioinformatics Research and Applications (Vol. 9096, pp. 138–149). https://doi.org/10.1007/978-3-319-19048-8_12

Kleiner, M., Hooper, L. V., & Duerkop, B. A. (2015). Evaluation of methods to purify virus-like particles for metagenomic sequencing of intestinal viromes. BMC Genomics, 16(7), 7. https://doi.org/10.1186/s12864-014-1207-4

Kleiner, M., Wentrup, C., Holler, T., Lavik, G., Harder, J., Lott, C., … Dubilier, N. (2015). Use of carbon monoxide and hydrogen by a bacteria-animal symbiosis from seagrass sediments. Environmental Microbiology, 17(12), 5023–5035. https://doi.org/10.1111/1462-2920.12912

Koryachko, A., Matthiadis, A., Ducoste, J. J., Tuck, J., Long, T. A., & Williams, C. (2015). Computational approaches to identify regulators of plant stress response using high-throughput gene expression data. Current Plant Biology, 3-4, 20–29. https://doi.org/10.1016/j.cpb.2015.04.001

Kottegoda, S., Waligora, E., & Hyman, M. (2015). Isolation and characterization of a 2-methylpropene (isobutylene)-metabolizing bacterium, Mycobacterium sp. ELW1. Applied and Environmental Microbiology, 81, 1966–1976.

Microbial-mediated redistribution of ecosystem nitrogen cycling can delay progressive nitrogen limitation. (2015). Biogeochemistry. https://doi.org/10.1007/s10533-015-0160-x

Miller, E. S., Whittman, J., Kropinski, A. M., & Areaenssesn, E. M. (2015). Divavirus taxonomic bacteriophage group infecting Paenibacillus larvae. International Committee on the Taxonomy of Viruses.

Olarte, R. A., Worthington, C. J., Horn, B. W., Moore, G. G., Singh, R., Monacell, J. T., … Carbone, I. (2015). Enhanced diversity and aflatoxigenicity in interspecific hybrids ofAspergillus flavusandAspergillus parasiticus. Molecular Ecology, 24(8), 1889–1909. https://doi.org/10.1111/mec.13153

Phillippy, B., Perera, I., Donahue, J., & Gillaspy, G. (2015). Certain Malvaceae Plants Have a Unique Accumulation of  myo-Inositol 1,2,4,5,6-Pentakisphosphate. Plants, 4(2), 267–283. https://doi.org/10.3390/plants4020267

Pope, W. H., Bowman, C. A., Russell, D. A., Jacobs-Sera, D., Asai, D. J., Cresawn, S. G., … Hatfull, G. F. (2015). Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity. ELife, 4. https://doi.org/10.7554/eLife.06416

Resilience vs. historical contingency in microbial responses to environmental change. (2015). Ecology Letters. https://doi.org/10.1111/ele.12451

Salvato, F., Balbuena, T. S., Nelson, W., Rao, R. S. P., He, R., Soderlund, C. A., … Thelen, J. J. (2015). Comparative Proteomic Analysis of Developing Rhizomes of the Ancient Vascular PlantEquisetum hyemaleand Different Monocot Species. Journal of Proteome Research, 14(4), 1779–1791. https://doi.org/10.1021/pr501157w

Sayavedra, L., Kleiner, M., Ponnudurai, R., Wetzel, S., Pelletier, E., Barbe, V., … eLife. (2015). Abundant toxin-related genes in the genomes of beneficial symbionts from deep-sea hydrothermal vent mussels. ELife, 4, e07966. https://doi.org/10.7554/eLife.07966

Short-Term Precipitation Exclusion Alters Microbial Responses to Soil Moisture in a Wet Tropical Forest. (2015). Microbial Ecology. https://doi.org/10.1007/s00248-014-0436-z

Utturkar, S. M., Klingeman, D. M., Bruno-Barcena, J. M., Chinn, M. S., Grunden, A. M., Köpke, M., & Brown, S. D. (2015). Sequence data for Clostridium autoethanogenum using three generations of sequencing technologies. Scientific Data, 2(1). https://doi.org/10.1038/SDATA.2015.14

Wang, G.-F., He, Y., Strauch, R., Olukolu, B., Nielsen, D., Li, X., & Balint-Kurti, P. (2015). Maize Homologs of HCT, a Key Enzyme in Lignin Biosynthesis, Bind the NLR Rp1 Proteins to Modulate the Defense Response. Plant Physiology, 169. https://doi.org/10.1104/pp.15.00703

Worden, N., Wilkop, T. E., Esteve, V. E., Jeannotte, R., Lathe, R., Vernhettes, S., … Drakakaki, G. (2015). CESA TRAFFICKING INHIBITOR Inhibits Cellulose Deposition and Interferes with the Trafficking of Cellulose Synthase Complexes and Their Associated Proteins KORRIGAN1 and POM2/CELLULOSE SYNTHASE INTERACTIVE PROTEIN. Plant Physiology, 167(2), 381–393. https://doi.org/10.1104/pp.114.249003