Plant and Microbial Biology

College of Agriculture and Life Sciences

Works Published in 2020

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Displaying works 21 - 40 of 108 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

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2020 article

Editorial overview: Directionality and precision - how signaling and gene regulation drive plant development and growth

Van Norman, J. M., Strader, L. C., & Sozzani, R. (2020, October). CURRENT OPINION IN PLANT BIOLOGY, Vol. 57, pp. A1–A3.

By: J. Van Norman *, L. Strader* & R. Sozzani  n

Sources: Web Of Science, ORCID
Added: January 19, 2021

2020 journal article

Caspases from scleractinian coral show unique regulatory features

JOURNAL OF BIOLOGICAL CHEMISTRY, 295(43), 14578–14591.

By: S. Shrestha *, J. Tung *, R. Grinshpon n, P. Swartz n, P. Hamilton n , B. Dimos *, L. Mydlarz *, A. Clark*

author keywords: caspase; cysteine protease; allosteric regulation; substrate specificity; coral apoptosis; coral immunity; functional divergence; substrate selection; CARD-caspase; apoptosis
MeSH headings : Amino Acid Sequence; Animals; Anthozoa / chemistry; Anthozoa / cytology; Anthozoa / enzymology; Anthozoa / metabolism; Apoptosis; Caspases / chemistry; Caspases / metabolism; Coral Reefs; Crystallography, X-Ray; Enzyme Activation; Humans; Models, Molecular; Protein Conformation; Protein Domains; Sequence Alignment; Substrate Specificity
Sources: ORCID, Web Of Science
Added: January 14, 2021

2020 journal article

Deeply Sequenced Infectious Clones of Key Cassava Begomovirus Isolates from Cameroon

MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 9(46).

By: J. Hoyer *, V. Fondong *, M. Dallas n, C. Aimone n, D. Deppong n, S. Duffy *, L. Hanley-Bowdoin n 

Sources: Web Of Science, ORCID
Added: January 11, 2021

2020 journal article

Bacterial exposure leads to variable mortality but not a measurable increase in surface antimicrobials across ant species

PEERJ, 8.

By: O. Halawani n, R. Dunn n , A. Grunden n  & A. Smith n

author keywords: Entomopathogen; Metapleural gland; Social immunity; Bacterial exposure; Social insects; Sociobiology; Antimicrobial
Sources: Web Of Science, ORCID
Added: January 11, 2021

2020 journal article

Transductomics: sequencing-based detection and analysis of transduced DNA in pure cultures and microbial communities

MICROBIOME, 8(1).

By: M. Kleiner n , B. Bushnell *, K. Sanderson*, L. Hooper * & B. Duerkop *

MeSH headings : Animals; DNA, Bacterial / analysis; DNA, Bacterial / genetics; Gastrointestinal Microbiome / genetics; Gene Transfer, Horizontal / genetics; Genomics; Male; Mice; Mice, Inbred C57BL; Microbiota / genetics; Reproducibility of Results; Transduction, Genetic
Sources: Web Of Science, ORCID
Added: December 21, 2020

2020 journal article

Genetic insights into the evolution of genera with the eastern Asia–eastern North America floristic disjunction: a transcriptomics analysis

American Journal of Botany, 107(12), 1736–1748.

By: A. Melton *, S. Chen *, Y. Zhao *, C. Fu *, Q. Xiang n , S. Cheng *, G. Wong*, P. Soltis *, D. Soltis *, M. Gitzendanner *

author keywords: eastern Asia– eastern North America; floristic disjunction; molecular evolution; species richness anomaly
MeSH headings : Asia; Evolution, Molecular; Asia, Eastern; North America; Phylogeny; Transcriptome
Sources: Web Of Science, ORCID
Added: December 21, 2020

2020 review

Phytopathogenic Cercosporoid Fungi-From Taxonomy to Modern Biochemistry and Molecular Biology

[Review of ]. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 21(22).

By: U. Swiderska-Burek *, M. Daub n, E. Thomas n , M. Jaszek *, A. Pawlik * & G. Janusz *

author keywords: cercosporoid fungi; Cercospora s; lat; cercosporin; pathogenesis; enzymes; biotechnological application
MeSH headings : Ascomycota / classification; Ascomycota / genetics; Ascomycota / metabolism; Biosynthetic Pathways / physiology; Gene Expression Regulation, Fungal / physiology; Plant Diseases / microbiology
Sources: Web Of Science, ORCID
Added: December 21, 2020

2020 journal article

Draft Genome Sequence of Lactobacillus rhamnosus NCB 441, Isolated from Egyptian White Domiati Cheese

Microbiology Resource Announcements.

By: M. Moore  n, H. Whittington n, M. Azcarate-Peril * & J. Bruno-Bárcena  n

Ed(s): K. Stedman

Source: ORCID
Added: December 3, 2020

2020 journal article

Docking Characterization and in vitro Inhibitory Activity of Flavan-3-ols and Dimeric Proanthocyanidins Against the Main Protease Activity of SARS-Cov-2

Frontiers in Plant Science, 11.

By: Y. Zhu  n & D. Xie n 

author keywords: flavan-3-ols; flavan-3-ol gallates; procyanidins; COVID-19; green tea; muscadine grape; cacao; dark chocolate
Sources: Crossref, ORCID
Added: December 1, 2020

2020 journal article

Effects of Plant-Soil Feedback on Switchgrass Productivity Related to Microbial Origin

Agronomy.

By: J. Kiniry *, C. Arthur*, K. Banick*, F. Fritschi *, Y. Wu * & C. Hawkes n 

author keywords: Panicum virgatum; bioenergy; perennial crop; geographic variation
Source: ORCID
Added: December 1, 2020

2020 journal article

Genotype by environment interaction for gene expression in Drosophila melanogaster

NATURE COMMUNICATIONS, 11(1).

By: W. Huang n, M. Carbone n, R. Lyman n, R. Anholt n & T. Mackay n

MeSH headings : Animals; Drosophila melanogaster / genetics; Female; Gene Expression; Gene Expression Regulation; Gene Regulatory Networks; Gene-Environment Interaction; Genes, Insect; Genetic Variation; Genotype; Male; Quantitative Trait Loci; RNA-Seq; Temperature; Transcriptome
Source: Web Of Science
Added: November 30, 2020

2020 journal article

Transcriptomic and life history responses of the mayfly Neocloeon triangulifer to chronic diel thermal challenge

SCIENTIFIC REPORTS, 10(1).

By: H. Chou n, D. Jima n, D. Funk*, J. Jackson*, B. Sweeney* & D. Buchwalter n

MeSH headings : Animals; Ephemeroptera / genetics; Ephemeroptera / physiology; Gene Expression Regulation; Heat-Shock Response / genetics; Heat-Shock Response / physiology; Temperature; Transcriptome
Source: Web Of Science
Added: November 30, 2020

2020 review

Microbial Interactions Within Multiple-Strain Biological Control Agents Impact Soil-Borne Plant Disease

[Review of ]. FRONTIERS IN MICROBIOLOGY, 11.

By: B. Niu *, W. Wang*, Z. Yuan*, R. Sederoff n, H. Sederoff n , V. Chiang n, R. Borriss *

author keywords: microbial interaction; biological control agents; soil-borne disease; consortia; microbiome and community
Sources: Web Of Science, ORCID
Added: November 16, 2020

2020 journal article

A resurrection study reveals limited evolution of phenology in response to recent climate change across the geographic range of the scarlet monkeyflower

Ecology and Evolution.

By: E. Vtipil  n & S. Sheth n 

author keywords: drought escape; Erythranthe; evolutionary rescue; flowering time; geographic range; Mimulus
Source: ORCID
Added: November 14, 2020

2020 journal article

Comparing DNA replication programs reveals large timing shifts at centromeres of endocycling cells in maize roots

PLOS GENETICS, 16(10).

By: E. Wear n, J. Song, G. Zynda, L. Mickelson-Young n, C. LeBlanc *, T. Lee  n, D. Deppong n, G. Allen n ...

MeSH headings : Cell Nucleus / drug effects; Cell Nucleus / genetics; Centromere / drug effects; Centromere / genetics; DNA Replication / drug effects; DNA Replication / genetics; DNA Replication Timing / drug effects; DNA Replication Timing / genetics; DNA, Plant / drug effects; DNA, Plant / genetics; Deoxyuridine / analogs & derivatives; Deoxyuridine / pharmacology; Endocytosis / drug effects; Meristem / drug effects; Meristem / genetics; Mitosis / drug effects; Mitosis / genetics; Nucleosomes / drug effects; Plant Roots / drug effects; Plant Roots / genetics; Plant Roots / growth & development; S Phase / genetics; Zea mays / genetics; Zea mays / growth & development
Sources: Web Of Science, ORCID
Added: November 9, 2020

2020 journal article

Dynamic Changes in the Microbiome of Rice During Shoot and Root Growth Derived From Seeds

FRONTIERS IN MICROBIOLOGY, 11.

By: M. Wang n, A. Eyre n, M. Thon *, Y. Oh n & R. Dean n 

author keywords: rice; seed and seedling; microbiome; diversity; driving factors
Source: Web Of Science
Added: October 19, 2020

2020 journal article

Tree canopy cover constrains the fertility-diversity relationship in plant communities of the southeastern United States

ECOLOGY, 101(10).

By: C. Hakkenberg *, R. Peet *, T. Wentworth n, K. Zhu & M. Schafale*

author keywords: Appalachian forests; biodiversity; community assembly; forest structure; hierarchical Bayesian; Longleaf Pine woodlands; multiscale sampling; Piedmont forests; productivity-diversity relationship; scale dependence; species richness
MeSH headings : Biodiversity; Forests; Humans; Plants; Southeastern United States; Trees
Source: Web Of Science
Added: October 12, 2020

2020 journal article

Wood construction more strongly shapes deadwood microbial communities than spatial location over 5 years of decay

ENVIRONMENTAL MICROBIOLOGY, 22(11), 4702–4717.

By: M. Lee n, B. Oberle *, W. Olivas *, D. Young* & A. Zanne *

MeSH headings : Bacteria / classification; Bacteria / genetics; Bacteria / isolation & purification; Carya / microbiology; Forests; Fungi / classification; Fungi / genetics; Fungi / isolation & purification; Microbial Interactions; Microbiota / physiology; Missouri; Quercus / microbiology; Time Factors; Wood / classification; Wood / microbiology
Source: Web Of Science
Added: October 5, 2020

2020 journal article

High-Quality Draft Genome Sequences of the Uncultured Delta3 Endosymbiont (Deltaproteobacteria) Assembled from Metagenomes of the Gutless Marine Worm Olavius algarvensis

MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 9(31).

By: Y. Sato, J. Wippler, C. Wentrup, T. Woyke, N. Dubilier & M. Kleiner 

Sources: Web Of Science, ORCID
Added: October 5, 2020

2020 article

In memory of Professor Tang Yan-Cheng: New perspectives in systematic and evolutionary biology

Xiang, Q.-Y., Chen, Z.-D., Song, B.-H., & Boufford, D. E. (2020, September). JOURNAL OF SYSTEMATICS AND EVOLUTION, Vol. 58, pp. 527–532.

By: Q. Xiang n , Z. Chen*, B. Song * & D. Boufford *

Sources: Web Of Science, ORCID
Added: October 5, 2020