Works Published in 2005
Displaying works 41 - 60 of 67 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2005 journal article
A link between ethylene and auxin uncovered by the characterization of two root-specific ethylene-insensitive mutants in Arabidopsis
PLANT CELL, 17(8), 2230–2242.
Contributors: A. Stepanova n , J. Hoyt n, A. Hamilton n & J. Alonso n
MeSH headings : Anthranilate Synthase / genetics; Anthranilate Synthase / metabolism; Arabidopsis / genetics; Ethylenes / metabolism; Indoleacetic Acids / physiology; Mutation; Nitrogenous Group Transferases / genetics; Nitrogenous Group Transferases / metabolism; Plant Growth Regulators / physiology; Plant Roots / genetics; Plant Roots / physiology
TL;DR:
It is shown that ethylene-triggered inhibition of root growth, one of the classical effects of ethylene in Arabidopsis thaliana seedlings, is mediated by the action of the WEAK ETHYLENE INSENSITIVE2/ANTHRANILATE SYNTHASE α1 and ASA1 genes that encode α- and β-subunits of a rate-limiting enzyme of Trp biosynthesis, anthranilate synthase.
(via Semantic Scholar)
www.plantcell.org (publisher PDF)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018
2005 journal article
Relationships between phenolic acid concentrations, transpiration, water utilization, leaf area expansion, and uptake of phenolic acids: Nutrient culture studies
JOURNAL OF CHEMICAL ECOLOGY, 31(8), 1907–1932.
author keywords: absolute and relative rates of leaf expansion; feedback regulation; inhibition; phenolic acids; phenolic acid depletion and uptake; recovery; transpiration; water utilization
MeSH headings : Cucumis sativus / physiology; Hydrogen-Ion Concentration; Hydroxybenzoates / metabolism; Plant Leaves / physiology; Plant Roots / metabolism; Plant Transpiration / physiology; Time Factors; Water / metabolism
TL;DR:
The ability of cucumber seedlings to modify active phenolic acid concentrations surrounding their roots suggests that cucumbers seedling can directly influence the magnitude of primary and secondary effects of phenolic acids through feedback regulation.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
6. Clean Water and Sanitation
(OpenAlex)
15. Life on Land
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018
2005 journal article
Identification, accumulation, and functional prediction of novel tomato transcripts systemically upregulated after fire damage
PHYSIOLOGIA PLANTARUM, 124(3), 311–322.
TL;DR:
It appears that, within an hour after being damaged by fire, plants systemically upregulate a variety of genes involved with basic cell metabolism and upkeep, in addition to classic defense genes such as proteinase inhibitors.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2005 journal article
Identification and characterization of endoplasmic reticulum-associated degradation proteins differentially affected by endoplasmic reticulum stress
PLANT PHYSIOLOGY, 138(1), 218–231.
MeSH headings : Amino Acid Sequence; Consensus Sequence; Endoplasmic Reticulum / genetics; Endoplasmic Reticulum / physiology; Humans; Membrane Proteins / chemistry; Membrane Proteins / genetics; Molecular Sequence Data; Multigene Family; Plant Leaves / genetics; Plant Proteins / genetics; Plant Proteins / metabolism; Plant Roots / genetics; Plant Stems / genetics; Ribotyping; Sequence Alignment; Sequence Homology, Amino Acid; Zea mays / genetics
TL;DR:
Four maize (Zea mays) Der1-like genes (Zm Derlins) that encode homologs of Der1p, a yeast (Saccharomyces cerevisiae) protein implicated in ER-associated degradation are identified, indicating that the Der 1p function is conserved among species.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2005 journal article
Geminivirus C3 protein: Replication enhancement and protein interactions
JOURNAL OF VIROLOGY, 79(15), 9885–9895.
MeSH headings : Amino Acid Sequence; Consensus Sequence; Geminiviridae / metabolism; Geminiviridae / physiology; Molecular Sequence Data; Plant Diseases / virology; Plant Proteins / metabolism; Proliferating Cell Nuclear Antigen / metabolism; Protein Binding; Tobacco; Viral Proteins / genetics; Viral Proteins / metabolism; Virus Replication
TL;DR:
Investigating the impact of mutations to amino acids that are conserved across the C3 protein family on replication enhancement and protein interactions in dicot-infecting geminivirus replication established the importance of C3-C3, C2-C1, and C4-PCNA interactions in geminIVirus replication.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
3. Good Health and Well-being
(OpenAlex)
13. Climate Action
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018
2005 journal article
The rb7 matrix attachment region increases the likelihood and magnitude of transgene expression in tobacco cells: A flow cytometric study
PLANT CELL, 17(2), 418–429.
MeSH headings : Agrobacterium tumefaciens / genetics; DNA, Bacterial / genetics; Flow Cytometry / methods; Gene Expression Regulation, Plant; Green Fluorescent Proteins / genetics; Green Fluorescent Proteins / metabolism; Matrix Attachment Regions; Plants, Genetically Modified; Promoter Regions, Genetic / genetics; Recombinant Fusion Proteins / genetics; Recombinant Fusion Proteins / metabolism; Tobacco / cytology; Tobacco / genetics; Transformation, Genetic; Transgenes / genetics
TL;DR:
Flow cytometry is used to measure green fluorescent protein (GFP) expression in individual tobacco cells from lines transformed by Agrobacterium tumefaciens to conclude that MAR-mediated overall increases in transgene expression involve both likelihood and magnitude.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science; OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018
2005 journal article
The CTB1 gene encoding a fungal polyketide synthase is required for cercosporin biosynthesis and fungal virulence of Cercospora nicotianae
MOLECULAR PLANT-MICROBE INTERACTIONS, 18(5), 468–476.
author keywords: gene disruption; pathogenicity; perylenequinone
MeSH headings : Amino Acid Sequence; Ascomycota / enzymology; Ascomycota / genetics; Ascomycota / pathogenicity; Gene Expression; Molecular Sequence Data; Mycotoxins / biosynthesis; Perylene / analogs & derivatives; Perylene / metabolism; Plant Leaves / microbiology; Polyketide Synthases / genetics; Polyketide Synthases / metabolism; Sequence Alignment; Sequence Homology, Amino Acid; Tobacco / microbiology; Virulence / genetics
TL;DR:
It is demonstrated conclusively that cercosporin is synthesized via a polyketide pathway, and cercOSpor in is an important virulence factor in C. nicotianae.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science; OpenAlex)
Source: Web Of Science
Added: August 6, 2018
2005 journal article
Seasonal leaf dynamics across a tree density gradient in a Brazilian savanna
OECOLOGIA, 145(2), 307–316.
author keywords: cerrado; leaf area index; phenology; tropical forest; water potential
MeSH headings : Brazil; Ecosystem; Plant Leaves / physiology; Poaceae / physiology; Population Dynamics; Seasons; Trees / physiology
TL;DR:
Ground-based measurements demonstrate that groundlayer LAI declines with increasing tree density across sites, with savanna grasses being excluded at a tree LAI of approximately 3.3, and compared the data to remotely sensed vegetation indices, finding that field measurements were more strongly correlated to the enhanced vegetation index than to the normalized difference vegetation index.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action
(Web of Science)
15. Life on Land
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2005 journal article
Phylogenetic analyses identify 10 classes of the protein disulfide isomerase family in plants, including single-domain protein disulfide isomerase-related proteins
Plant Physiology, 137(2), 762–778.
MeSH headings : Base Sequence; Evolution, Molecular; Gene Expression Regulation; Molecular Sequence Data; Multigene Family; Oxidative Stress; Phylogeny; Plants / enzymology; Plants / genetics; Protein Disulfide-Isomerases / genetics; Sequence Homology, Nucleic Acid; Thioredoxins / genetics
TL;DR:
A genome-wide search of Arabidopsis genes was carried out to identify plant PDI-like proteins, and a set of 22 PDIL proteins were identified that constitute a well-supported clade containing orthologs of known PDIs.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: NC State University Libraries, NC State University Libraries
Added: August 6, 2018
2005 journal article
Marker-free chromosomal integration of the manganese superoxide dismutase gene (sodA) from Streptococcus thermophilus into Lactobacillus gasseri
FEMS MICROBIOLOGY LETTERS, 246(1), 91–101.
Contributors: J. Bruno-Bárcena n , M. Azcárate-Peril n, T. Klaenhammer n & H. Hassan n
author keywords: functional gene replacement; manganese superoxide dismutase; oxidative stress; Lactobacillus gasseri; lactic acid bacteria; probiotics
MeSH headings : Anti-Bacterial Agents / pharmacology; Bacterial Proteins / analysis; Chromosomes, Bacterial / genetics; Gene Expression; Hydrogen Peroxide / pharmacology; Lactobacillus / enzymology; Lactobacillus / genetics; Lactobacillus / growth & development; Plasmids / genetics; RNA, Bacterial / analysis; RNA, Messenger / analysis; Streptococcus thermophilus / enzymology; Streptococcus thermophilus / genetics; Superoxide Dismutase / genetics; Transformation, Bacterial
TL;DR:
This is the first report showing the successful utilization of the pORI plasmids system to generate marker-free gene integration in L. gasseri strains.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018
2005 journal article
In vitro reconstitution of an NADPH-dependent superoxide reduction pathway from Pyrococcus furiosus
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 71(3), 1522–1530.
MeSH headings : Amino Acid Sequence; Base Sequence; Biophysical Phenomena; Biophysics; DNA, Archaeal / genetics; Genes, Archaeal; Hydrogen Peroxide / metabolism; Kinetics; Molecular Sequence Data; NADH, NADPH Oxidoreductases / chemistry; NADH, NADPH Oxidoreductases / genetics; NADH, NADPH Oxidoreductases / metabolism; NADP / metabolism; Oxidation-Reduction; Pyrococcus furiosus / genetics; Pyrococcus furiosus / metabolism; Recombinant Proteins / chemistry; Recombinant Proteins / genetics; Recombinant Proteins / metabolism; Sequence Homology, Amino Acid; Superoxides / metabolism
TL;DR:
This is the first demonstration of in vitro superoxide reduction to hydrogen peroxide using NAD(P)H as the electron donor in an SOR-mediated pathway.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
7. Affordable and Clean Energy
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018
2005 journal article
Ethylene signalling and response pathway: A unique signalling cascade with a multitude of inputs and outputs
Physiologia Plantarum, 123(2), 195–206.
Contributors: A. Stepanova & J. Alonso
Sources: NC State University Libraries, NC State University Libraries, ORCID
Added: August 6, 2018
2005 journal article
Connecting fine- and broad-scale species-area relationships of Southeastern US Flora
ECOLOGY, 86(5), 1172–1177.
author keywords: arrhenius model; Carolina Vegetation Survey; Gleason model; North Carolina; USA; scale; South Carolina; USA; species accumulation rate; species-area curve; species richness
UN Sustainable Development Goal Categories
13. Climate Action
(Web of Science)
15. Life on Land
(Web of Science; OpenAlex)
Source: Web Of Science
Added: August 6, 2018
2005 journal article
Matrix attachment regions and regulated transcription increase and stabilize transgene expression
PLANT BIOTECHNOLOGY JOURNAL, 3(5), 535–543.
author keywords: PTGS; TGS; RNAi; MARs; transgene expression; induction
TL;DR:
Transgene silencing has been shown to be associated with strong promoters, but it is not known whether the propensity for silencing is caused by the level of transcription, or some other property of the promoter, so transgenes with inducible promoters may be less susceptible to silencing.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science; OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018
2005 book
Guide to tendrillate climbers of Costa Rican mountains
Ames, Iowa: Blackwell Pub. Professional.
Source: NC State University Libraries
Added: August 6, 2018
2005 journal article
Characterization and comparative analysis of Arabidopsis phosphatidylinositol phosphate 5-kinase 10 reveals differences in Arabidopsis and human phosphatidylinositol phosphate kinases
FEBS LETTERS, 579(16), 3427–3432.
author keywords: phosphatidylinositol phosphate kinase; lipid kinase; Arabidopsis
MeSH headings : Amino Acid Sequence; Arabidopsis / enzymology; Arabidopsis / genetics; Arabidopsis Proteins / chemistry; Arabidopsis Proteins / genetics; Arabidopsis Proteins / isolation & purification; Humans; Kinetics; Molecular Sequence Data; Phosphatidylinositol Phosphates / chemistry; Phosphotransferases (Alcohol Group Acceptor) / chemistry; Phosphotransferases (Alcohol Group Acceptor) / genetics; Phosphotransferases (Alcohol Group Acceptor) / isolation & purification; Phosphotransferases (Alcohol Group Acceptor) / metabolism; Sequence Alignment; Substrate Specificity; Transcription, Genetic
TL;DR:
Comparative analysis of recombinant AtPIPK10 and AtPipK1 with recombinant HsPIPKIα reveals that the Arabidopsis enzymes have roughly 200‐ and 20‐fold lower V max/K m, respectively, which reveal one explanation for the longstanding mystery of the relatively low phosphatidylinositol‐(4,5)‐bisphosphate:phosphatidic acid‐4‐ph phosphate ratio in terrestrial plants.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018
2005 review
Visibility matters: increasing knowledge of women's contributions to ecology
[Review of ]. FRONTIERS IN ECOLOGY AND THE ENVIRONMENT, 3(4), 212–219.
Source: Web Of Science
Added: August 6, 2018
2005 journal article
Matrix attachment regions increase the efficiency and stability of RNA-mediated resistance to Tomato Spotted Wilt Virus in transgenic tobacco
TRANSGENIC RESEARCH, 14(2), 193–206.
author keywords: gene silencing; matrix attachment regions; RNA-mediated virus resistance; Tomato Spotted Wilt Virus
MeSH headings : Breeding; DNA Methylation; Gene Expression Regulation; Gene Silencing; Immunity, Innate; Matrix Attachment Regions; Plants, Genetically Modified; Promoter Regions, Genetic; Tobacco / genetics; Tobacco / virology; Tospovirus / genetics; Tospovirus / pathogenicity; Transcription, Genetic
TL;DR:
Results are consistent with the concept that MARs may prevent transcriptional silencing, and short interfering 21– 25 nt RNAs from the transgene that are characteristic of post-transcriptional gene silencing (PTGS) were present in the resistant R1 plants, but not the susceptible R4 plants, indicating that virus resistance was associated with PTGS of thetransgene.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018
2005 journal article
Long range lateral root activity by neo-tropical savanna trees
PLANT AND SOIL, 270(1-2), 169–178.
TL;DR:
The conclusion that savanna trees have more or longer lateral roots compared to tropical forest trees is concluded, which may be an adaptation for more efficient nutrient absorption.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action
(Web of Science)
15. Life on Land
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2005 journal article
An Arabidopsis NPR1-like gene, NPR4, is required for disease resistance
PLANT JOURNAL, 41(2), 304–318.
Contributors: G. Liu *, E. Holub *, J. Alonso n, J. Ecker * & P. Fobert*
author keywords: reverse genetics; PR genes; cross-talk; signaling; salicylic acid; gene family
MeSH headings : Amino Acid Sequence; Arabidopsis / genetics; Arabidopsis Proteins / genetics; Base Sequence; DNA, Bacterial / genetics; Immunity, Innate; Molecular Sequence Data; Mutagenesis, Insertional; Phylogeny; Plant Diseases / genetics; Plant Diseases / microbiology; Pseudomonas syringae / pathogenicity
TL;DR:
Results indicate that NPR4 is required for basal defense against pathogens, and that it may be implicated in the cross-talk between the SA- and JA-dependent signaling pathways.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
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