Plant and Microbial Biology

College of Agriculture and Life Sciences

Works Published in 2022

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Displaying works 41 - 60 of 72 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2022 article

Molecular and biochemical characterization of two 4-coumarate: CoA ligase genes in tea plant (Camellia sinensis)

Li, M., Guo, L., Wang, Y., Li, Y., Jiang, X., Liu, Y., … Xia, T. (2022, May 12). PLANT MOLECULAR BIOLOGY, Vol. 109.

author keywords: 4-Coumaric acid; CoA ligase; Flavonoids; Lignin; Metabolic engineering of phenylpropanoid; Stress
Sources: ORCID, Web Of Science
Added: May 13, 2022

2022 article

Admixture of divergent genomes facilitates hybridization across species in the family Brassicaceae

Shin, H., Park, J. E., Park, H. R., Choi, W. L., Yu, S. H., Koh, W., … Huh, J. H. (2022, April 28). NEW PHYTOLOGIST, Vol. 4.

By: H. Shin*, J. Park*, H. Park*, W. Choi*, S. Yu*, W. Koh*, S. Kim*, H. Soh* ...

author keywords: allopolyploidy; Brassicaceae; DNA methylation; epigenome; genome divergence; hybrid; xBrassicoraphanus
Sources: Web Of Science, ORCID
Added: May 10, 2022

2022 journal article

A de novo regulation design shows an effectiveness in altering plant secondary metabolism

JOURNAL OF ADVANCED RESEARCH, 37, 43–60.

By: M. Li, X. He n, C. La Hovary, Y. Zhu, Y. Dong, S. Liu n, H. Xing n, Y. Liu n ...

author keywords: Arabidopsis; Alkaloid; Anthocyanin; Molecular tools; Tobacco; Transcription factor
Source: Web Of Science
Added: May 2, 2022

2022 article

Diversity and Structure of Bacterial Communities in Different Rhizocompartments (Rhizoplane, Rhizosphere, and Bulk) at Flag Leaf Emergence in Four Winter Wheat Varieties

Zervas, A., Ellegaard-Jensen, L., Hennessy, R. C., Bak, F., Guan, Y., Horn Herms, C., … Nicolaisen, M. H. (2022, April 13). MICROBIOLOGY RESOURCE ANNOUNCEMENTS, Vol. 4.

By: A. Zervas*, L. Ellegaard-Jensen*, R. Hennessy*, F. Bak*, Y. Guan*, C. Horn Herms*, K. Molina Zamudio*, D. Thybo Ganzhorn ...

Sources: Web Of Science, ORCID
Added: May 2, 2022

2022 journal article

Identification of Transcription Factors Regulating SARS-CoV-2 Tropism Factor Expression by Inferring Cell-Type-Specific Transcriptional Regulatory Networks in Human Lungs

VIRUSES-BASEL, 14(4).

author keywords: SARS-CoV-2; single-cell RNA-seq; differential network analysis
Source: Web Of Science
Added: May 2, 2022

2022 journal article

RNA-Seq and Gene Regulatory Network Analyses Uncover Candidate Genes in the Early Defense to Two Hemibiotrophic Colletorichum spp. in Strawberry

FRONTIERS IN GENETICS, 12.

By: T. Adhikari, R. Aryal, L. Redpath, L. Broeck n, H. Ashrafi, A. Philbrick, R. Jacobs n, R. Sozzani, F. Louws

author keywords: Colletotrichum acutatum; Colletotrichum gloeosporioides; Fragaria x ananassa; rate-reducing resistance; gene regulatory network
Sources: Web Of Science, ORCID
Added: April 25, 2022

2022 journal article

Considerations for constructing a protein sequence database for metaproteomics

COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 20, 937–952.

By: J. Blakeley-Ruiz n & M. Kleiner

author keywords: Metaproteome; Metagenomics; Microbiome; Microbial community; Multi-omics; Microbiota; Microbial ecology
Sources: Web Of Science, ORCID
Added: April 25, 2022

2022 article

BTS Is a Negative Regulator for the Cellular Energy Level and the Expression of Energy Metabolism-Related Genes Encoded by Two Organellar Genomes in Leaf Tissues

Choi, B., Hyeon, D. Y., Lee, J., Long, T. A., Hwang, D., & Hwang, I. (2022, April 15). MOLECULES AND CELLS, Vol. 4.

author keywords: Arabidopsis thaliana; BRUTUS; energy metabolism; shoot tissues
Sources: ORCID, Web Of Science
Added: April 20, 2022

2022 journal article

Tandem C2 domains mediate dynamic organelle targeting of a DOCK family guanine nucleotide exchange factor

JOURNAL OF CELL SCIENCE, 135(7).

By: E. Mallery*, M. Yanagisawa*, C. Zhang*, Y. Lee*, L. Robles n, J. Alonso, D. Szymanski*

author keywords: DOCK; Rac/Rho-of-plants; Lipid binding; Organelle association; Small GTPases
Sources: ORCID, Web Of Science
Added: April 14, 2022

2022 review

Genetic Characteristics and Metabolic Interactions between Pseudocercospora fijiensis and Banana: Progress toward Controlling Black Sigatoka

[Review of ]. PLANTS-BASEL, 11(7).

author keywords: black Sigatoka; cell wall; dispensable chromosomes; Dothideomycetes; effectors; genomics; host resistance; pathogenicity; secondary metabolism
Sources: Web Of Science, ORCID
Added: April 5, 2022

2022 article

Genetic Characteristics and Metabolic Interactions between Pseudocercospora fijiensis and Banana: Progress toward Controlling Black Sigatoka

Noar, R. D., & Thomas, E. (2022, March 31). Plants.

Source: ORCID
Added: March 31, 2022

2022 journal article

Metabolomic characterization of 5 native Peruvian chili peppers (Capsicum spp.) as a tool for species discrimination

Food Chemistry, 386, 30, 13274.

By: F. Espichán*, R. Rojas*, F. Quispe*, G. Cabanac* & G. Marti*

author keywords: Metabolomic; Capsicum; OPLS-DA; SUS-plot; Biomarkers; Peruvian native chili peppers
Source: ORCID
Added: March 29, 2022

2022 article

Microbes, memory and moisture: Predicting microbial moisture responses and their impact on carbon cycling

Evans, S., Allison, S., & Hawkes, C. (2022, March 20). FUNCTIONAL ECOLOGY, Vol. 3.

By: S. Evans*, S. Allison* & C. Hawkes

author keywords: carbon; drought; legacy; microbial communities; modelling; rainfall; respiration; soil
Sources: Web Of Science, ORCID
Added: March 28, 2022

2022 journal article

Early detection of plant virus infection using multispectral imaging and spatial-spectral machine learning

SCIENTIFIC REPORTS, 12(1).

Sources: Web Of Science, ORCID
Added: March 21, 2022

2022 article

Organic solar powered greenhouse performance optimization and global economic opportunity

Ravishankar, E., Booth, R. E., Hollingsworth, J. A., Ade, H., Sederoff, H., DeCarolis, J. F., & Brendan T. O'Connor. (2022, March 10). ENERGY & ENVIRONMENTAL SCIENCE, Vol. 15.

By: E. Ravishankar, R. Booth, J. Hollingsworth, H. Ade, H. Sederoff, J. DeCarolis, . Brendan T. O'Connor

Sources: ORCID, Web Of Science
Added: March 19, 2022

2022 journal article

Field-grown soybean shows genotypic variation in physiological and seed composition responses to heat stress during seed development

ENVIRONMENTAL AND EXPERIMENTAL BOTANY, 195.

By: A. Ortiz*, I. De Smet*, R. Sozzani & A. Locke

author keywords: Photosynthesis; V-cmax; Respiration; Yield; Seed composition
Sources: Web Of Science, ORCID
Added: March 14, 2022

2022 journal article

A New Pipeline for Removing Paralogs in Target Enrichment Data

SYSTEMATIC BIOLOGY, 71(2), 410–425.

Sources: Web Of Science, ORCID
Added: March 7, 2022

2022 journal article

An experimental strategy for preparing circular ssDNA virus genomes for next-generation sequencing

JOURNAL OF VIROLOGICAL METHODS, 300.

author keywords: Phi29; EquiPhi29; MiSeq; Whiteflies; Viral DNA sequencing
Sources: Web Of Science, ORCID
Added: March 7, 2022

2022 journal article

Next Steps in Integrative Biology: Mapping Interactive Processes Across Levels of Biological Organization

INTEGRATIVE AND COMPARATIVE BIOLOGY, 61(6), 2066–2074.

By: S. Cavigelli*, J. Leips*, Q. Xiang, D. Lemke* & N. Konow*

Sources: Web Of Science, ORCID
Added: March 7, 2022

2022 journal article

Single-Cell-Based High-Throughput Ig and TCR Repertoire Sequencing Analysis in Rhesus Macaques

JOURNAL OF IMMUNOLOGY, 208(3), 762–771.

Source: Web Of Science
Added: February 28, 2022