Plant and Microbial Biology
College of Agriculture and Life Sciences
Works Published in 2018
Displaying works 61 - 80 of 101 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2018 journal article
The Good, the Bad, and the Lethal: Gene Expression and Metabolomics Reveal Physiological Mechanisms Underlying Chronic Thermal Effects in Mayfly Larvae (Neocloeon triangulifer)
FRONTIERS IN ECOLOGY AND EVOLUTION, 6.
author keywords: aquatic insects; mayfly; thermal limits; metabolomics; temperature
www.frontiersin.org (publisher PDF)
Source: Web Of Science
Added: December 17, 2018
2018 journal article
Grafting the Indeterminate Tomato Cultivar Moneymaker onto Multifort Rootstock Improves Cold Tolerance
HORTSCIENCE, 53(11), 1610–1617.
Contriutors: D. Suchoff n , P. Perkins-Veazie n, H. Sederoff n , J. Schultheis n, M. Kleinhenz*, F. Louws n , C. Gunter n
author keywords: Solanum habrochaites; Solanum lycopersicum; herbaceous grafts; root system morphology; suboptimal temperature
Sources: Web Of Science, ORCID
Added: December 17, 2018
2018 journal article
Quantifying the short-term flowering after fire in some plant communities of a cerrado grassland
PLANT ECOLOGY & DIVERSITY, 11(3), 259–266.
author keywords: Campo cerrado; cerrado; fire; flower production; ground-layer plant species; seed production; tropical grasslands
Source: Web Of Science
Added: December 3, 2018
2018 article
Chromatin structure profile data from DNS-seq: Differential nuclease sensitivity mapping of four reference tissues of B73 maize (Zea mays L)
Turpin, Z. M., Vera, D. L., Savadel, S. D., Lung, P.-Y., Wear, E. E., Mickelson-Young, L., … Bass, H. W. (2018, October). DATA IN BRIEF, Vol. 20, pp. 358–363.
Sources: Web Of Science, ORCID
Added: December 3, 2018
2018 journal article
Expression of additive genetic variance for fitness in a population of partridge pea in two field sites
EVOLUTION, 72(11), 2537–2545.
author keywords: Adaptation; aster models; breeding values; Chamaecrista fasciculata; G x E; quantitative genetics
MeSH headings : Adaptation, Physiological / genetics; Chamaecrista / genetics; Chamaecrista / growth & development; Environment; Genetic Fitness; Genotype; Minnesota
Sources: Web Of Science, ORCID
Added: November 26, 2018
2018 journal article
Local Auxin Biosynthesis Is a Key Regulator of Plant Development
DEVELOPMENTAL CELL, 47(3), 306-+.
Contriutors: J. Brumos n, L. Robles n, J. Yun n, T. Vu n, S. Jackson n, J. Alonso n, A. Stepanova n
MeSH headings : Arabidopsis / metabolism; Arabidopsis Proteins / metabolism; Biological Transport; Ethylenes / metabolism; Flowers / metabolism; Gene Expression Regulation, Plant / genetics; Indoleacetic Acids / metabolism; Meristem / embryology; Meristem / metabolism; Morphogenesis; Oxygenases; Plant Development / genetics; Plant Growth Regulators / genetics; Plant Growth Regulators / metabolism; Plant Roots / embryology; Plant Roots / genetics; Plant Roots / metabolism; Spatio-Temporal Analysis
Sources: Web Of Science, ORCID
Added: November 26, 2018
2018 journal article
Prebiotics for Lactose Intolerance: Variability in Galacto-Oligosaccharide Utilization by Intestinal Lactobacillus rhamnosus
NUTRIENTS, 10(10).
Contriutors: J. Arnold *, J. Simpson *, J. Roach *, J. Bruno-Barcena n & M. Azcarate-Peril *
author keywords: prebiotics for lactose intolerance; galacto-oligosaccharides; Lactobacillus; probiotics; beta-galactosidases
MeSH headings : Gastrointestinal Microbiome; Glycoside Hydrolases / genetics; Glycoside Hydrolases / metabolism; Humans; Lacticaseibacillus rhamnosus / genetics; Lacticaseibacillus rhamnosus / metabolism; Lactose Intolerance / microbiology; Oligosaccharides / metabolism; Prebiotics
Sources: Web Of Science, ORCID
Added: November 19, 2018
2018 journal article
Diacylglycerol acyltransferase 1 is activated by phosphatidate and inhibited by SnRK1-catalyzed phosphorylation
PLANT JOURNAL, 96(2), 287–299.
author keywords: triacylglycerol biosynthesis; DGAT; Brassica napus; biochemical regulation; allostery
MeSH headings : Acyl Coenzyme A / metabolism; Brassica napus / enzymology; Brassica napus / genetics; Carbohydrate Metabolism; Catalysis; Diacylglycerol O-Acyltransferase / genetics; Diacylglycerol O-Acyltransferase / metabolism; Energy Metabolism; Homeostasis; Lipids / physiology; Phosphatidic Acids / metabolism; Phosphorylation; Plant Proteins / genetics; Plant Proteins / metabolism; Protein Serine-Threonine Kinases / genetics; Protein Serine-Threonine Kinases / metabolism; Triglycerides / biosynthesis
Sources: Web Of Science, ORCID
Added: October 22, 2018
2018 journal article
Murine colitis reveals a disease-associated bacteriophage community
NATURE MICROBIOLOGY, 3(9), 1023–1031.
MeSH headings : Animals; Bacteriophages / genetics; Bacteriophages / isolation & purification; Cells, Cultured; Colitis / pathology; Colitis / virology; Disease Models, Animal; Dysbiosis / virology; Gastrointestinal Microbiome / physiology; Genome, Viral / genetics; Humans; Intestinal Mucosa / virology; Male; Mice; Mice, Inbred C57BL; Mice, Knockout
Sources: Web Of Science, ORCID
Added: October 19, 2018
2018 journal article
Phosphoinositides control the localization of HOPS subunit VPS41, which together with VPS33 mediates vacuole fusion in plants
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 115(35), EB305–EB314.
Contriutors: C. Brillada n, J. Zheng n, F. Krüger*, E. Rovira-Diaz n, J. Askani *, K. Schumacher *, M. Rojas-Pierce n
author keywords: Arabidopsis; vacuole fusion; HOPS; SNARE; phosphoinositides
MeSH headings : Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Membrane Fusion / physiology; Membrane Proteins / genetics; Membrane Proteins / metabolism; Phosphatidylinositol Phosphates / genetics; Phosphatidylinositol Phosphates / metabolism; Vacuoles / genetics; Vacuoles / metabolism; Vesicular Transport Proteins / genetics; Vesicular Transport Proteins / metabolism
Sources: Web Of Science, ORCID
Added: October 19, 2018
2018 journal article
Sucrose Nonfermenting 1-Related Protein Kinase 1 Phosphorylates a Geminivirus Rep Protein to Impair Viral Replication and Infection
PLANT PHYSIOLOGY, 178(1), 372–389.
MeSH headings : Amino Acid Sequence; Begomovirus / genetics; Begomovirus / metabolism; Begomovirus / physiology; Host-Pathogen Interactions; Solanum lycopersicum / enzymology; Solanum lycopersicum / virology; Mutation; Phosphorylation; Plant Diseases / virology; Plant Proteins / genetics; Plant Proteins / metabolism; Protein Binding; Protein Domains; Protein Serine-Threonine Kinases / genetics; Protein Serine-Threonine Kinases / metabolism; Sequence Homology, Amino Acid; Serine / genetics; Serine / metabolism; Viral Proteins / chemistry; Viral Proteins / genetics; Viral Proteins / metabolism; Virus Replication
Sources: Web Of Science, ORCID
Added: October 16, 2018
2018 journal article
The E3 ligase BRUTUS facilitates degradation of VOZ1/2 transcription factors
PLANT CELL AND ENVIRONMENT, 41(10), 2463–2474.
Contriutors: D. Selote n, A. Matthiadis n, J. Gillikin n, M. Sato * & T. Long n
author keywords: abiotic stress; Arabidopsis thaliana; BRUTUS; ubiquitin-proteasome system; VOZ1/2
MeSH headings : Arabidopsis / enzymology; Arabidopsis / metabolism; Arabidopsis Proteins / metabolism; Arabidopsis Proteins / physiology; Basic Helix-Loop-Helix Transcription Factors / metabolism; Blotting, Western; FMN Reductase / metabolism; Immunoprecipitation; Plant Roots / metabolism; Real-Time Polymerase Chain Reaction; Stress, Physiological; Subcellular Fractions / metabolism; Transcription Factors / metabolism; Ubiquitin-Protein Ligases / metabolism; Ubiquitin-Protein Ligases / physiology
Sources: Web Of Science, ORCID
Added: October 16, 2018
2018 review
Bacteria and archaea as the sources of traits for enhanced plant phenotypes
[Review of ]. BIOTECHNOLOGY ADVANCES, 36(7), 1900–1916.
author keywords: Abiotic Stress; Archaea; Bacteria; Carbon Fixation; Genetic Engineering; Nitrogen Acquisition; Phosphate Acquisition; Yield
MeSH headings : Archaea / genetics; Bacteria / genetics; Carbon Cycle; Genetic Engineering; Nitrogen / metabolism; Phenotype; Phosphates / metabolism; Photosynthesis; Plant Development; Plant Physiological Phenomena; Plants / genetics; Plants / microbiology; Plants, Genetically Modified; Stress, Physiological
Sources: Web Of Science, ORCID
Added: October 16, 2018
2018 journal article
Overexpression of Artemisia annua Cinnamyl Alcohol Dehydrogenase Increases Lignin and Coumarin and Reduces Artemisinin and Other Sesquiterpenes
FRONTIERS IN PLANT SCIENCE, 9.
author keywords: Artemisia annua; artemisinin; arteannuin B; cinnamyl alcohol dehydrogenases; coumarin; lignin; sesquiterpenes
Sources: Web Of Science, ORCID
Added: August 6, 2018
2018 journal article
Synergy of Sodium Nitroprusside and Nitrate in Inhibiting the Activity of Sulfate Reducing Bacteria in Oil-Containing Bioreactors
FRONTIERS IN MICROBIOLOGY, 9.
author keywords: souring control; biocide; sulfate reduction; hydrogen sulfide; sodium nitroprusside
Sources: Web Of Science, ORCID
Added: August 6, 2018
2018 journal article
Resolving relationships and phylogeographic history of the Nyssa sylvatica complex using data from RAD-seq and species distribution modeling
Molecular Phylogenetics and Evolution, 126, 1–16.
author keywords: RAD-seq; LGM; Nyssa; Phylogeography; Refugia; SDM
MeSH headings : Bayes Theorem; Genetic Loci; Models, Theoretical; Nyssa / classification; Nyssa / genetics; Phylogeny; Phylogeography; Polymorphism, Single Nucleotide / genetics; Sequence Analysis, DNA / methods; Species Specificity; Time Factors
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018
2018 journal article
Exposure to heavy metal stress triggers changes in plasmodesmatal permeability via deposition and breakdown of callose
JOURNAL OF EXPERIMENTAL BOTANY, 69(15), 3715–3728.
author keywords: Callose; copper; iron; nutrient stress; plasmodesmata; root development
MeSH headings : Arabidopsis / drug effects; Arabidopsis / physiology; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Glucan 1,3-beta-Glucosidase / genetics; Glucan 1,3-beta-Glucosidase / metabolism; Glucans / metabolism; Glucosyltransferases / genetics; Glucosyltransferases / metabolism; Metals, Heavy / toxicity; Permeability / drug effects; Plant Roots / drug effects; Plant Roots / physiology; Plasmodesmata / drug effects; Plasmodesmata / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018
2018 review
A Plant Biologist's Toolbox to Study Translation
[Review of ]. FRONTIERS IN PLANT SCIENCE, 9.
Contriutors: S. Mazzoni-Putman n & A. Stepanova n
author keywords: translation; ribosome; Ribo-seq; TRAP; polysome profiling; toeprinting; reporter; amino acid tagging
Sources: Web Of Science, ORCID
Added: August 6, 2018
2018 journal article
Molecular Cloning and Functional Characterization of a Dihydroflavonol 4-Reductase from Vitis bellula
MOLECULES, 23(4).
author keywords: Vitis bellula; dihydroflavonol reductase; dihydroflavonol; leucoanthocyanidin; anthocyanin; proanthocyanidin
MeSH headings : Alcohol Oxidoreductases / genetics; Alcohol Oxidoreductases / metabolism; Amino Acid Sequence; Cloning, Molecular / methods; Flavonoids / chemistry; Gene Expression Regulation, Enzymologic / drug effects; Gene Expression Regulation, Plant; Open Reading Frames; Plant Proteins / genetics; Plant Proteins / metabolism; Proanthocyanidins / metabolism; Quercetin / analogs & derivatives; Quercetin / chemistry; Vitis / enzymology; Vitis / genetics
Sources: Web Of Science, ORCID
Added: August 6, 2018
2018 journal article
Metaproteomics method to determine carbon sources and assimilation pathways of species in microbial communities
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 115(24), E5576–E5584.
author keywords: Protein-SIP; metaproteome; microbial ecology; microbiome; Q Exactive
MeSH headings : Animals; Carbon / metabolism; Carbon Isotopes / metabolism; Environmental Microbiology; Isotope Labeling / methods; Metabolic Networks and Pathways / physiology; Microbiota / physiology; Proteome / metabolism; Proteomics / methods; Software; Symbiosis / physiology
Sources: Web Of Science, ORCID
Added: August 6, 2018
