Plant and Microbial Biology

College of Agriculture and Life Sciences

Works Published in 2020

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Displaying works 81 - 100 of 108 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2020 journal article

Thermostable endoglucanase gene derived by amplification from the genomic DNA of a cellulose-enriched mixed culture from mudspring water of Mt. Makiling, Laguna, Philippines

WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY, 36(3).

By: R. Tambalo*, A. Raymundo* & A. Grunden n

author keywords: Endoglucanase; Saccharolobus; Mt; Makiling mudspring; Lignocellulose hydrolysis; Thermophiles
MeSH headings : Amino Acid Sequence; Archaea / enzymology; Archaea / genetics; Bacteria / enzymology; Bacteria / genetics; Base Sequence; Cellulase / genetics; Cellulase / metabolism; Cellulose / metabolism; Cloning, Molecular; DNA; Enzyme Stability; Escherichia coli / genetics; Genomics; Hydrogen-Ion Concentration; Molecular Weight; Philippines; Recombinant Proteins; Sequence Alignment; Sulfolobales / enzymology; Sulfolobales / genetics; Temperature; Water / metabolism; Water Microbiology
Sources: Web Of Science, ORCID
Added: April 6, 2020

2020 journal article

Environmental Viscosity Modulates Interbacterial Killing during Habitat Transition

MBIO, 11(1).

author keywords: Aliivibrio fischeri; aggregation; competition; proteomics; type VI secretion
MeSH headings : Aliivibrio fischeri / genetics; Aliivibrio fischeri / physiology; Animals; Decapodiformes / microbiology; Ecosystem; Gene Expression Regulation, Bacterial; Genotype; Proteomics; Seawater; Symbiosis; Type VI Secretion Systems / genetics; Type VI Secretion Systems / metabolism; Viscosity
Sources: Web Of Science, ORCID
Added: April 6, 2020

2020 journal article

Revision of Fothergilla (Hamamelidaceae), including resurrection of F. parvifolia and a new species, F. milleri

PHYTOKEYS, (144), 57–80.

By: J. Haynes, W. Phillips, A. Krings, N. Lynch & T. Ranney

author keywords: Coastal Plain; Fothergilleae; Hamamelidoideae; southeastern United States
Source: Web Of Science
Added: April 6, 2020

2020 journal article

Biomass yields, cytogenetics, fertility, and compositional analyses of novel bioenergy grass hybrids (Tripidium spp.)

GLOBAL CHANGE BIOLOGY BIOENERGY, 12(5), 361–373.

By: N. Maren n, D. Touchell n, T. Ranney n, H. Ashrafi n, M. Whitfield n & M. Chinn n

author keywords: bioenergy; bioprocessing; Erianthus; fertility; forage; lignocellulose; Miscanthus; plant breeding; polyploidy; reproductive biology; Saccharum; sterility; Tripidium
Sources: Web Of Science, ORCID
Added: April 6, 2020

2020 journal article

No Net Loss of Species Diversity After Prescribed Fires in the Brazilian Savanna

FRONTIERS IN FORESTS AND GLOBAL CHANGE, 3.

author keywords: cerrado; conservation; fauna; fire impact; fire management; plant functional groups; prescribed burn
Source: Web Of Science
Added: March 30, 2020

2020 journal article

Comparative transcriptomics of stem bark reveals genes associated with bast fiber development in Boehmeria nivea L. gaud (ramie)

BMC GENOMICS, 21(1).

By: J. Xie*, J. Li*, Y. Jie*, D. Xie n, D. Yang*, H. Shi*, Y. Zhong*

author keywords: Ramie; Bast fiber; Phloem; Transcriptome
MeSH headings : Boehmeria / physiology; Computational Biology / methods; Gene Expression Profiling; Gene Expression Regulation, Plant; Gene Ontology; Molecular Sequence Annotation; Phloem / genetics; Plant Bark / genetics; Plant Development / genetics; Quantitative Trait, Heritable; Transcriptome
Sources: Web Of Science, ORCID
Added: March 10, 2020

2020 journal article

An importin-beta-like protein mediates lignin-modification-induced dwarfism in Arabidopsis

PLANT JOURNAL, 102(6), 1281–1293.

author keywords: Arabidopsis thaliana; importin; lignin; MYB4; plant growth; ref8; suppressor mutant
MeSH headings : Adaptor Proteins, Signal Transducing / metabolism; Adaptor Proteins, Signal Transducing / physiology; Arabidopsis / genetics; Arabidopsis / growth & development; Arabidopsis / metabolism; Arabidopsis Proteins / metabolism; Arabidopsis Proteins / physiology; Cell Division; Gene Expression Regulation, Plant; Lignin / metabolism; Repressor Proteins / metabolism; Repressor Proteins / physiology; Transcription Factors / metabolism; Transcription Factors / physiology; beta Karyopherins / metabolism
Sources: Web Of Science, ORCID
Added: March 10, 2020

2020 journal article

Achieving Net Zero Energy Greenhouses by Integrating Semitransparent Organic Solar Cells

JOULE, 4(2), 490–506.

Sources: Web Of Science, ORCID
Added: March 10, 2020

2020 journal article

Development of a relative quantification method for infrared matrix-assisted laser desorption electrospray ionization mass spectrometry imaging of Arabidopsis seedlings

RAPID COMMUNICATIONS IN MASS SPECTROMETRY, 34(6).

MeSH headings : Arabidopsis / chemistry; Arabidopsis / genetics; Arabidopsis Proteins / genetics; Indoleacetic Acids / analysis; Indoles / analysis; Mutation; Oximes / analysis; Oxygenases / genetics; Seedlings / chemistry; Seedlings / genetics; Spectrometry, Mass, Electrospray Ionization / methods; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization / methods
Sources: Web Of Science, ORCID
Added: March 10, 2020

2020 journal article

Discovery and characterization of tannase genes in plants: roles in hydrolysis of tannins

NEW PHYTOLOGIST, 226(4), 1104–1116.

By: X. Dai*, Y. Liu*, J. Zhuang*, S. Yao*, L. Liu, X. Jiang*, K. Zhou*, Y. Wang* ...

author keywords: biochemical analysis; galloylated catechins; phylogenetic origin; plant kingdom; tannase; tannins
MeSH headings : Carboxylic Ester Hydrolases / genetics; Crops, Agricultural / enzymology; Fragaria / enzymology; Hydrolysis; Phylogeny; Plant Proteins; Tannins
Sources: Web Of Science, ORCID
Added: March 2, 2020

2020 journal article

Dendroecology of Pinus elliottii Engelm. reveals waves of invasion in a neotropical savanna

BIOLOGICAL INVASIONS, 22(2), 403–419.

author keywords: Dendrochronology; Diameter increment; Wood production; Growth rings; Fire record; Cerrado
Source: Web Of Science
Added: February 27, 2020

2020 review

Movement of small RNAs in and between plants and fungi

[Review of ]. MOLECULAR PLANT PATHOLOGY, 21(4), 589–601.

By: M. Wang n & R. Dean n

author keywords: cross kingdom; extracellular vesicles; small RNAs; transportation
MeSH headings : Extracellular Vesicles / metabolism; Fungi / metabolism; Phloem / metabolism; Plasmodesmata / metabolism; RNA Interference; RNA, Plant / metabolism
Source: Web Of Science
Added: February 17, 2020

2020 journal article

Spatial and temporal turnover of soil microbial communities is not linked to function in a primary tropical forest

Ecology, 101(4).

author keywords: bacteria; balancing turnover; functional redundancy; fungi; gradient turnover; spatiotemporal dynamics
MeSH headings : Ecosystem; Forests; Fungi; Microbiota; Soil; Soil Microbiology
Source: ORCID
Added: February 16, 2020

2020 article

A resurrection study reveals limited evolution of thermal performance in response to recent climate change across the geographic range of the scarlet monkeyflower

Wooliver, R., Tittes, S. B., & Sheth, S. N. (2020, February 14). (Vol. 2). Vol. 2.

Source: ORCID
Added: February 15, 2020

2020 journal article

Determinants of geographic range size in plants

New Phytologist.

author keywords: biogeography; dispersal ability; endemism; niche breadth; niche evolution; occupancy; range filling; rarity
MeSH headings : Ecosystem; Plants
Source: ORCID
Added: February 14, 2020

2020 journal article

Regulation of ovule initiation by gibberellins and brassinosteroids in tomato and Arabidopsis: two plant species, two molecular mechanisms

The Plant Journal.

author keywords: Arabidopsis thaliana; tomato; Solanum lycopersicum; gibberellins; brassinosteroids; ovule; reproductive development; hormone interaction
MeSH headings : Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Brassinosteroids / metabolism; Gene Expression Regulation, Plant / genetics; Gene Expression Regulation, Plant / physiology; Gibberellins / metabolism; Solanum lycopersicum / genetics; Solanum lycopersicum / metabolism; Plant Proteins / genetics; Plant Proteins / metabolism; Signal Transduction / genetics; Signal Transduction / physiology
Source: ORCID
Added: February 14, 2020

2020 journal article

Use of unconventional mixed Acetone-Butanol-Ethanol solvents for anthocyanin extraction from Purple-Fleshed sweetpotatoes

Food Chemistry, 314, 125959.

author keywords: Ipomoea batatas; Anthocyanidins; Phenolics; Cyanidin; Peonidin; Temperature; Flour
MeSH headings : Acetone / chemistry; Anthocyanins / analysis; Anthocyanins / chemistry; Anthocyanins / isolation & purification; Butanols / chemistry; Chemical Fractionation / methods; Ethanol / chemistry; Ipomoea batatas / chemistry; Phenols / isolation & purification; Plant Extracts / chemistry; Solvents / chemistry
Sources: ORCID, Crossref
Added: January 27, 2020

2020 journal article

Mass Spectrometry-Based Identification of Phospho-Tyr in Plant Proteomics

Journal of Proteome Research, 19(2), 561–571.

By: N. Ahsan*, R. Wilson*, R. Rao*, F. Salvato n, M. Sabila*, H. Ullah*, J. Miernyk*

author keywords: mass spectrometry; plant proteomics; regulation; signaling; tyrosine phosphorylation
MeSH headings : Amino Acid Motifs; Chromatography, Affinity / methods; Gene Ontology; Mass Spectrometry / methods; Phosphoproteins / metabolism; Phosphorylation; Phosphotyrosine / metabolism; Plants / metabolism; Protein Processing, Post-Translational / genetics; Protein Processing, Post-Translational / physiology; Proteome / metabolism; Proteomics / methods; Signal Transduction / genetics; Signal Transduction / physiology; Tyrosine / analogs & derivatives; Tyrosine / metabolism; src Homology Domains
Source: ORCID
Added: January 23, 2020

2020 journal article

Functional demonstration of plant flavonoid carbocations proposed to be involved in the biosynthesis of proanthocyanidins

PLANT JOURNAL, 101(1), 18–36.

By: P. Wang*, Y. Liu*, L. Zhang*, W. Wang*, H. Hou*, Y. Zhao*, X. Jiang*, J. Yu* ...

author keywords: plant flavonoid carbocation; epicatechin carbocation; catechin carbocation; (-)-epicatechin; proanthocyanidins
MeSH headings : Camellia sinensis / genetics; Camellia sinensis / metabolism; Flavonoids / metabolism; Gene Expression Regulation, Plant / genetics; Gene Expression Regulation, Plant / physiology; NADH, NADPH Oxidoreductases / genetics; NADH, NADPH Oxidoreductases / metabolism; Plant Proteins / genetics; Plant Proteins / metabolism; Proanthocyanidins / biosynthesis
Sources: Web Of Science, ORCID
Added: January 13, 2020

2020 journal article

An Improved Recombineering Toolset for Plants

The Plant Cell.

MeSH headings : Arabidopsis / genetics; Chromosomes, Artificial, Bacterial; Gene Editing / methods; Genes, Reporter; Genetic Engineering / methods; Plants / genetics; Plants, Genetically Modified / genetics; Recombination, Genetic
Source: ORCID
Added: January 11, 2020