Plant and Microbial Biology

College of Agriculture and Life Sciences

Works Published in 2020

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Displaying works 1 - 20 of 105 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2020 journal article

Developmental Analysis of Mimulus Seed Transcriptomes Reveals Functional Gene Expression Clusters and Four Imprinted, Endosperm-Expressed Genes

Frontiers in Plant Science, 11.

By: M. Flores-Vergara n, E. Oneal*, M. Costa*, G. Villarino*, C. Roberts*, M. Balaguer n, S. Coimbra*, J. Willis*, R. Franks

author keywords: seed development; ribonucleic acid sequencing; developmental time course analysis; endosperm; genomic imprinting; K-means clustering; MADS-box genes; Mimulus guttatus
Source: ORCID
Added: February 9, 2023

2020 journal article

Accessing Legacy Phosphorus in Soils

Soil Systems, 4(4), 74.

By: S. Doydora n, L. Gatiboni n, K. Grieger n, D. Hesterberg n, J. Jones n, E. McLamore*, R. Peters n, R. Sozzani, L. Broeck n, O. Duckworth n

author keywords: legacy phosphorus; speciation; transformation; accessibility
Source: ORCID
Added: October 21, 2022

2020 journal article

Volatile organic compounds from leaf litter decomposition alter soil microbial communities and carbon dynamics

Ecology, 101(10).

By: S. McBride*, M. Choudoir, N. Fierer* & M. Strickland*

author keywords: ammonium; carbon cycle; carbon sequestration; microbial biomass; microbial diversity; mineral associated organic matter; nitrate; particulate organic matter; stable isotope probing; target gene sequencing; VOC
Source: ORCID
Added: September 18, 2022

2020 thesis

Extracting detailed metabolic information and connections from mammalian gut microbiomes via metaproteomics

(PhD diss., University of Tennessee). https://trace.tennessee.edu/utk_graddiss/6194

By: J. Blakeley-Ruiz

Source: ORCID
Added: August 25, 2022

2020 journal article

Functional interrelationships between carbohydrate and lipid storage, and mitochondrial activity during sporulation in Saccharomyces cerevisiae

Yeast.

author keywords: cyclin 3; glycogen; lipid droplet; meiosis; trehalose; yeast
Source: ORCID
Added: July 11, 2022

2020 chapter

RiboSimR: A Tool for Simulation and Power Analysis of Ribo-seq Data

In I. Măndoiu, T. Murali, G. Narasimhan, S. Rajasekaran, P. Skums, & A. Zelikovsky (Eds.), Computational Advances in Bio and Medical Sciences (pp. 121–133).

By: P. Perkins n, A. Stepanova n, J. Alonso n & S. Heber n

Ed(s): I. Măndoiu, T. Murali, G. Narasimhan, S. Rajasekaran, P. Skums & A. Zelikovsky

Event: ICCABS 2019

Sources: Crossref, ORCID
Added: October 9, 2021

2020 journal article

Comparative proteomics of related symbiotic mussel species reveals high variability of host–symbiont interactions

The ISME Journal, 14(2), 649–656.

By: R. Ponnudurai*, S. Heiden*, L. Sayavedra*, T. Hinzke*, M. Kleiner, C. Hentschker*, H. Felbeck*, S. Sievert* ...

Source: ORCID
Added: August 9, 2021

2020 article

Microbial DNA on the move: sequencing based detection and analysis of transduced DNA in pure cultures and microbial communities

Kleiner, M., Bushnell, B., Sanderson, K. E., Hooper, L. V., & Duerkop, B. A. (2020, January 16). (Vol. 1). Vol. 1.

By: M. Kleiner, B. Bushnell*, K. Sanderson*, L. Hooper* & B. Duerkop*

Source: ORCID
Added: August 9, 2021

2020 article

Metabolic differences between symbiont subpopulations in the deep-sea tubeworm Riftia pachyptila

Hinzke, T., Kleiner, M., Meister, M., Schlüter, R., Hentschker, C., Pané-Farré, J., … Markert, S. (2020, April 9). (Vol. 4). Vol. 4.

By: T. Hinzke*, M. Kleiner, M. Meister*, R. Schlüter*, C. Hentschker*, J. Pané-Farré*, P. Hildebrandt*, H. Felbeck* ...

Source: ORCID
Added: August 9, 2021

2020 journal article

High-Quality Draft Genome Sequences of the Uncultured Delta3 Endosymbiont (Deltaproteobacteria) Assembled from Metagenomes of the Gutless Marine Worm Olavius algarvensis

MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 9(31).

By: Y. Sato*, J. Wippler*, C. Wentrup*, T. Woyke*, N. Dubilier* & M. Kleiner

Ed(s): F. Stewart

Sources: Web Of Science, ORCID
Added: June 14, 2021

2020 journal article

author keywords: plant invasion; adaptation; global change; population genetics; demography
Source: ORCID
Added: March 4, 2021

2020 journal article

Gibberellin-mediated RGA-LIKE1 degradation regulates embryo sac development in Arabidopsis

JOURNAL OF EXPERIMENTAL BOTANY, 71(22), 7059–7072.

By: M. Dolores Gomez, D. Barro-Trastoy*, C. Fuster-Almunia, P. Tornero*, J. Alonso n & M. Perez-Amador

author keywords: Arabidopsis; DELLA; development; embryo sac; gibberellin; megagametogenesis; ovule; RGL1
Sources: Web Of Science, ORCID
Added: February 15, 2021

2020 article

Qu-2, a robust poplar suspension cell line for molecular biology

JOURNAL OF FORESTRY RESEARCH.

By: C. Liu*, K. Li*, M. Wang*, E. Fan*, C. Yang*, J. Wang*, P. Fu*, X. Ge* ...

author keywords: Qu-2 cell line; Suspension cell; Poplar; Protoplast isolation; Transient transformation
Source: ORCID
Added: February 3, 2021

2020 article

Drought legacy affects microbial community trait distributions related to moisture along a savannah grassland precipitation gradient

JOURNAL OF ECOLOGY.

By: A. Leizeaga*, L. Hicks*, L. Manoharan*, C. Hawkes & J. Rousk*

author keywords: carbon use efficiency; drought legacy; drying‐ rewetting; microbial growth; resilience; resistance
Source: ORCID
Added: February 2, 2021

2020 journal article

Soil Water Content and Soil Respiration Rates Are Reduced for Years Following Wildfire in a Hot and Dry Climate

GLOBAL BIOGEOCHEMICAL CYCLES, 34(12).

By: S. Cooperdock*, C. Hawkes, D. Xu* & D. Breecker*

author keywords: soil respiration; soil moisture; wildfire; forest regeneration; forest disturbance dynamics; global change
Sources: Web Of Science, ORCID
Added: January 25, 2021

2020 journal article

RNA-seq of aboveground sporophyte's transcriptome of Huperzia serrata and transcriptional understanding of early steps associated with huperzine biosynthesis in forest

CURRENT PLANT BIOLOGY, 24.

By: Q. Peng*, H. Long*, C. Du*, J. Li* & D. Xie

author keywords: Huperssia serrata; Huperzine; RNA-seq; Transcriptome; Forest
Sources: Web Of Science, ORCID
Added: January 25, 2021

2020 journal article

BAM1/2 receptor kinase signaling drives CLE peptide-mediated formative cell divisions in Arabidopsis roots

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 117(51), 32750–32756.

By: A. Crook*, A. Willoughby*, O. Hazak*, S. Okuda*, K. VanDerMolen*, C. Soyars*, P. Cattaneo*, N. Clark ...

author keywords: Arabidopsis; receptor kinase; cell cycle; SHORT-ROOT; CLE peptide
Sources: Web Of Science, ORCID
Added: January 19, 2021

2020 article

Editorial overview: Directionality and precision - how signaling and gene regulation drive plant development and growth

Van Norman, J. M., Strader, L. C., & Sozzani, R. (2020, October). CURRENT OPINION IN PLANT BIOLOGY, Vol. 57, pp. A1–A3.

By: J. Van Norman*, L. Strader* & R. Sozzani

Sources: Web Of Science, ORCID
Added: January 19, 2021

2020 journal article

Caspases from scleractinian coral show unique regulatory features

JOURNAL OF BIOLOGICAL CHEMISTRY, 295(43), 14578–14591.

By: S. Shrestha*, J. Tung*, R. Grinshpon n, P. Swartz, P. Hamilton, B. Dimos*, L. Mydlarz*, A. Clark

author keywords: caspase; cysteine protease; allosteric regulation; substrate specificity; coral apoptosis; coral immunity; functional divergence; substrate selection; CARD-caspase; apoptosis
Sources: ORCID, Web Of Science
Added: January 14, 2021

2020 journal article

Deeply Sequenced Infectious Clones of Key Cassava Begomovirus Isolates from Cameroon

MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 9(46).

Sources: Web Of Science, ORCID
Added: January 11, 2021