Molecular and Structural Biochemistry - 2000

Pourdeyhimi, B., & Batra, S. K. (2000). ITMA '99: A teview. Textile Progress, 30(1/2).

Sederoff, R. R. (2000). Tree genomes: What will we understand about them by the year 2020 and how might we use that knowledge? Forest Genetics and Sustainability, 23. https://doi.org/10.1007/978-94-017-1576-8_4

Sisler, E. C., & Serek, M. (2000). Regulation of banana ripening by gaseous blockers of ethylene receptor. Proceedings of the First International Conference on Banana and Plantain for Africa :  Kampala, Uganda, 14-18 October, 1996, (540), 539.

Lev-Yadun, S., & Sederoff, R. (2000). [Review of Pines as model gymnosperms to study evolution, wood formation, and perennial growth]. JOURNAL OF PLANT GROWTH REGULATION, 19(3), 290–305. https://doi.org/10.1007/s003440000045

Gurgel, P. V., Carbonell, R. G., & Swaisgood, H. E. (2000). Fractionation of whey proteins with a hexapeptide ligand affinity resin. BIOSEPARATION, 9(6), 385–392. https://doi.org/10.1023/A:1011191818927

Ashraf, S. S., Guenther, R. H., Ansari, G., Malkiewicz, A., Sochacka, E., & Agris, P. F. (2000). Role of modified nucleosides of yeast tRNA(Phe) in ribosomal binding. CELL BIOCHEMISTRY AND BIOPHYSICS, 33(3), 241–252. https://doi.org/10.1385/CBB:33:3:241

Osman, T. A. M., Hemenway, C. L., & Buck, K. W. (2000). Role of the 3 ' tRNA-like structure in tobacco mosaic virus minus-strand RNA synthesis by the viral RNA-dependent RNA polymerase in vitro. JOURNAL OF VIROLOGY, 74(24), 11671–11680. https://doi.org/10.1128/JVI.74.24.11671-11680.2000

Plante, C. A., Kim, K. H., Pillai-Nair, N., Osman, T. A. M., Buck, K. W., & Hemenway, C. L. (2000). Soluble, template-dependent extracts from Nicotiana benthamiana plants infected with potato virus X transcribe both plus- and minus-strand RNA templates. VIROLOGY, 275(2), 444–451. https://doi.org/10.1006/viro.2000.0512

O'Malley, D. M., Sederoff, R. R., & Grattapaglia, D. (2000). Methods for within family selection in woody perennials using genetic markers. Washington, DC: U.S. Patent and Trademark Office.

Hall, A. E., Findell, J. L., Schaller, G. E., Sisler, E. C., & Bleecker, A. B. (2000). Ethylene perception by the ERS1 protein in Arabidopsis. PLANT PHYSIOLOGY, 123(4), 1449–1457. https://doi.org/10.1104/pp.123.4.1449

Vaughn, J. L., Feher, V., Naylor, S., Strauch, M. A., & Cavanagh, J. (2000). Novel DNA binding domain and genetic regulation model of Bacillus subtilis transition state regulator AbrB. Nature Structural Biology, 7(12), 1139–1146.

Collins, D., Kim, K. W., Holton, W. C., Sierzputowska-Gracz, H., & Stejskal, E. O. (2000). NMR quantum computation with indirectly coupled gates. PHYSICAL REVIEW A, 62(2). https://doi.org/10.1103/physreva.62.022304

Zhong, Z., Thomlinson, W., Chapman, D., & Sayers, D. (2000). Implementation of diffraction-enhanced imaging experiments: at the NSLS and APS. NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH SECTION A-ACCELERATORS SPECTROMETERS DETECTORS AND ASSOCIATED EQUIPMENT, 450(2-3), 556–567. https://doi.org/10.1016/S0168-9002(00)00308-9

Noah, J. W., Shapkina, T., & Wollenzien, P. (2000). UV-induced crosslinks in the 16S rRNAs of Escherichia coli, Bacillus subtilis and Thermus aquaticus and their implications for ribosome structure and photochemistry. NUCLEIC ACIDS RESEARCH, 28(19), 3785–3792. https://doi.org/10.1093/nar/28.19.3785

Brumano, M. H. N., Rogana, E., & Swaisgood, H. E. (2000). Thermodynamics of unfolding of beta-trypsin at pH 2.8. Archives of Biochemistry and Biophysics, 382(1), 57–62. https://doi.org/10.1006/abbi.2000.1983

Sengupta, R., Vainauskas, S., Yarian, C., Sochacka, E., Malkiewicz, A., Guenther, R. H., … Agris, P. F. (2000). Modified constructs of the tRNA T Psi C domain to probe substrate conformational requirements of m(1)A(58) and m(5)U(54) tRNA methyltransferases. NUCLEIC ACIDS RESEARCH, 28(6), 1374–1380. https://doi.org/10.1093/nar/28.6.1374

Freedman, D. S., Bowman, B. A., Otvos, J. D., Srinivasan, SR, & Berenson, G. S. (2000). Levels and correlates of LDL and VLDF, particle sizes among children: the Bogalusa heart study. ATHEROSCLEROSIS, 152(2), 441–449. https://doi.org/10.1016/S0021-9150(99)00495-5

Ke, Y. H., Sierzputowska-Gracz, H., Gdaniec, Z., & Theil, E. C. (2000). Internal loop/bulge and hairpin loop of the iron-responsive element of ferritin mRNA contribute to maximal iron regulatory protein 2 binding and translational regulation in the iso-iron-responsive element/iso-iron regulatory protein family. BIOCHEMISTRY, 39(20), 6235–6242. https://doi.org/10.1021/bi9924765

Hanley-Bowdoin, L., Settlage, S. B., Orozco, B. M., Nagar, S., & Robertson, D. (2000). Geminiviruses: Models for plant DNA replication, transcription, and cell cycle regulation. Critical Reviews in Biochemistry and Molecular Biology, 35(2), 105–140.

Bass, H. W., Nagar, S., Hanley-Bowdoin, L., & Robertson, D. (2000). Chromosome condensation induced by geminivirus infection of mature plant cells. Journal of Cell Science, 113(7), 1149–1160.

Couture, P., Otvos, J. D., Cupples, L. A., Lahoz, C., Wilson, P. W. F., Schaefer, E. J., & Ordovas, J. M. (2000). Association of the C-514T polymorphism in the hepatic lipase gene with variations in lipoprotein subclass profiles - The Framingham Offspring Study. ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY, 20(3), 815–822. https://doi.org/10.1161/01.ATV.20.3.815

Kong, L. J., Orozco, B. M., Roe, J. L., Nagar, S., Ou, S., Feiler, H. S., … Hanley-Bowdoin, L. (2000). A geminivirus replication protein interacts with the retinoblastoma protein through a novel domain to determine symptoms and tissue specificity of infection in plants. EMBO JOURNAL, 19(13), 3485–3495. https://doi.org/10.1093/emboj/19.13.3485

Phinney, B. S., Blackburn, K., & Brown, D. T. (2000). The surface conformation of sindbis virus glycoproteins E1 and E2 at neutral and low pH, as determined by mass spectrometry-based mapping. JOURNAL OF VIROLOGY, 74(12), 5667–5678. https://doi.org/10.1128/JVI.74.12.5667-5678.2000

Phinney, B. S., & Brown, D. T. (2000). Sindbis virus glycoprotein E1 is divided into two discrete domains at amino acid 129 by disulfide bridge connections. JOURNAL OF VIROLOGY, 74(19), 9313–9316. https://doi.org/10.1128/JVI.74.19.9313-9316.2000

Ikeda, S., Foegeding, E. A., & Hardin, C. C. (2000). Phospholipid/fatty acid-induced secondary structural change in beta-lactoglobulin during heat-induced gelation. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 48(3), 605–610. https://doi.org/10.1021/jf990434h

Yarian, C., Marszalek, M., Sochacka, E., Malkiewicz, A., Guenther, R., Miskiewicz, A., & Agris, P. F. (2000). Modified nucleoside dependent Watson-Crick and wobble codon binding by tRNA(UUU)(Lys) species. BIOCHEMISTRY, 39(44), 13390–13395. https://doi.org/10.1021/bi001302g

Stuart, J. W., Gdaniec, Z., Guenther, R., Marszalek, M., Sochacka, E., Malkiewicz, A., & Agris, P. F. (2000). Functional anticodon architecture of human tRNA(Lys3) includes disruption of intraloop hydrogen bonding by the naturally occurring amino acid modification, t(6)A. BIOCHEMISTRY, 39(44), 13396–13404. https://doi.org/10.1021/bi0013039

Zhang, Y., Sederoff, R. R., & Allona, I. (2000). Differential expression of genes encoding cell wall proteins in vascular tissues from vertical and bent loblolly pine trees. Tree Physiology, 20(7), 457–466.

Feng, X. Q., Apelbaum, A., Sisler, E. C., & Goren, R. (2000). Control of ethylene responses in avocado fruit with 1-methylcyclopropene. POSTHARVEST BIOLOGY AND TECHNOLOGY, 20(2), 143–150. https://doi.org/10.1016/S0925-5214(00)00126-5

Mundus, D., & Wollenzien, P. (2000). Structure determination by directed photo-cross-linking in large RNA molecules with site-specific psoralen. In R.W. Skaggs & J. Schilfgaarde (Eds.), RNA-ligland interactions: Part B (Vol. 318, pp. 104–118). https://doi.org/10.1016/s0076-6879(00)18047-4

Crouse, D. A., Sierzputowska-Gracz, H., & Mikkelsen, R. L. (2000). Optimization of sample pH and temperature for phosphorus-31 nuclear magnetic resonance spectroscopy of poultry manure extracts. COMMUNICATIONS IN SOIL SCIENCE AND PLANT ANALYSIS, 31(1-2), 229–240. https://doi.org/10.1080/00103620009370432

Wei, J. Z., & Theil, E. C. (2000). Identification and characterization of the iron regulatory element in the ferritin gene of a plant (soybean). JOURNAL OF BIOLOGICAL CHEMISTRY, 275(23), 17488–17493. https://doi.org/10.1074/jbc.M910334199

Hanley-Bowdoin, L., Settlage, S. B., Orozco, B. M., Nagar, S., & Robertson, D. (2000). Geminiviruses - Models for plant DNA replication, transcription and cell cycle regulation ([correction to] vol 35, pg 105, 2000). Critical Reviews in Biochemistry and Molecular Biology, 35(4), U4.

Isasi, C. R., Shea, S., Deckelbaum, R. J., Couch, S. C., Starc, T. J., Otvos, J. D., & Berglund, L. (2000). Apolipoprotein epsilon 2 allele is associated with an anti-atherogenic lipoprotein profile in children: The Columbia University BioMarkers Study. PEDIATRICS, 106(3), 568–575. https://doi.org/10.1542/peds.106.3.568

Williams, K. A., & Nelson, P. V. (2000). Phosphate and potassium retention and release during chrysanthemum production from precharged materials: II. Calcined clays and brick chips. Journal of the American Society for Horticultural Science, 125(6), 757–764.

Williams, K. A., Nelson, P. V., & Hesterberg, D. (2000). Phosphate and potassium retention and release during chrysanthemum production from precharged materials: I. Alumina. Journal of the American Society for Horticultural Science, 125(6), 748–756.

Newman, D. R., Kuhn, J. F., Shanab, G. M., & Maxwell, E. S. (2000). Box C/D snoRNA-associated proteins: Two pairs of evolutionarily ancient proteins and possible links to replication and transcription. RNA, 6(6), 861–879. https://doi.org/10.1017/S1355838200992446

Sochacka, E., Czerwinska, G., Guenther, R., Cain, R., Agris, P. F., & Malkiewicz, A. (2000). Synthesis and properties of uniquely modified oligoribonucleotides: Yeast tRNA(Phe) fragments with 6-methyluridine and 5,6-dimethyluridine at site-specific positions. NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS, 19(3), 515–531. https://doi.org/10.1080/15257770008035004

Hernandez, R., Lee, H., Nelson, C., & Brown, D. T. (2000). A single deletion in the membrane-proximal region of the Sindbis virus glycoprotein E2 endodomain blocks virus assembly. JOURNAL OF VIROLOGY, 74(9), 4220–4228. https://doi.org/10.1128/JVI.74.9.4220-4228.2000

Couture, P., Otvos, J. D., Cupples, L. A., Wilson, P. W. F., Schaefer, E. J., & Ordovas, J. M. (2000). Absence of association between genetic variation in the promoter of the microsomal triglyceride transfer protein gene and plasma lipoproteins in the Framingham Offspring Study. ATHEROSCLEROSIS, 148(2), 337–343. https://doi.org/10.1016/S0021-9150(99)00281-6

Clark, A. C., Noland, B. W., & Baldwin, T. O. (2000). A rapid chromatographic method to separate the subunits of bacterial luciferase in urea-containing buffer. Bioluminescence and Chemiluminescence, Pt. C, 305, 157–164.

Orozco, B. M., Kong, L. J., Batts, L. A., Elledge, S., & Hanley-Bowdoin, L. (2000). The multifunctional character of a geminivirus replication protein is reflected by its complex oligomerization properties. JOURNAL OF BIOLOGICAL CHEMISTRY, 275(9), 6114–6122. https://doi.org/10.1074/jbc.275.9.6114

Muller, R., Sisler, E. C., & Serek, M. (2000). Stress induced ethylene production, ethylene binding, and the response to the ethylene action inhibitor 1-MCP in miniature roses. SCIENTIA HORTICULTURAE, 83(1), 51–59. https://doi.org/10.1016/S0304-4238(99)00099-0

Lapierre, C., Pollet, B., MacKay, J. J., & Sederoff, R. R. (2000). Lignin structure in a mutant pine deficient in cinnamyl alcohol dehydrogenase. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 48(6), 2326–2331. https://doi.org/10.1021/jf991398p

Shapkina, T. G., Dolan, M. A., Babin, P., & Wollenzien, P. (2000). Initiation factor 3-induced structural changes in the 30 S ribosomal subunit and in complexes containing tRNA(f)(Met) and mRNA. JOURNAL OF MOLECULAR BIOLOGY, 299(3), 615–628. https://doi.org/10.1006/jmbi.2000.3774

Pisano, E. D., Johnston, R. E., Chapman, D., Geradts, J., Iacocca, M. V., Livasy, C. A., … Thomlinson, W. C. (2000). Human breast cancer specimens: Diffraction-enhance imaging with histologic correlation - Improved conspicuity of lesion detail compared with digital radiography. RADIOLOGY, 214(3), 895–901. https://doi.org/10.1148/radiology.214.3.r00mr26895

Ordovas, J. M., Cupples, L. A., Corella, D., Otvos, J. D., Osgood, D., Martinez, A., … Schaefer, E. J. (2000). Association of cholesteryl ester transfer protein-TaqIB polymorphism with variations in lipoprotein subclasses and coronary heart disease risk - The Framingham study. ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY, 20(5), 1323–1329. https://doi.org/10.1161/01.ATV.20.5.1323

Theil, E. C., Takagi, H., Small, G. W., He, L., Tipton, A. R., & Danger, D. (2000). The ferritin iron entry and exit problem. INORGANICA CHIMICA ACTA, 297(1-2), 242–251. https://doi.org/10.1016/S0020-1693(99)00375-8

Juzumiene, D. I., & Wollenzien, P. (2000). Organization of the 16S rRNA around its 5 ' terminus determined by photochemical crosslinking in the 30S ribosomal subunit. RNA, 6(1), 26–40. https://doi.org/10.1017/S1355838200991659

Gardner, D. B., Sebastian, J., & Miller, W. L. (2000). Estradiol induces and hyperglycosylates the receptor for ovine gonadotropin-releasing hormone. ENDOCRINOLOGY, 141(1), 91–99. https://doi.org/10.1210/en.141.1.91

Clare, D. A., & Swaisgood, H. E. (2000). [Review of Bioactive milk peptides: A prospectus]. JOURNAL OF DAIRY SCIENCE, 83(6), 1187–1195. https://doi.org/10.3168/jds.S0022-0302(00)74983-6