Molecular and Structural Biochemistry - 2001

Hassan, H. (2001, May). Oxygen Radical Toxicity. Presented at the Annual Meeting of the Genotoxicity and Environmental Mutagen Society (GEMS), Research Triangle Park, NC.

Adamo, C., Heitzmann, M., Meilleur, F., Rega, N., Scalmani, G., Grand, A., … Barone, V. (2001). Interplay of intrinsic and environmental effects on the magnetic properties of free radicals issuing from H-atom addition to cytosine. Journal of the American Chemical Society, 123(29), 7113–7117, https://doi.org/10.1021/ja004284z

Li, Y., Pettersen, C. A., Martin, L. D., & Adler, K. B. (2001). MARCKS protein interaction with the cellular contractile machinery may regulate mucin secretion by human airway epithelium. American Journal of Respiratory and Critical Care Medicine, Vol. 163, p. A225.

Sisler, E. C., & Serek, M. (2001). New developments in ethylene control - compounds interacting with the ethylene receptor. Proceedings of the Seventh International Symposium on Postharvest Physiology of Ornamental Plants : Ft. Lauderdale, Florida, USA, 13-18 November 1999.

Sisler, E. C., Dupille, E., Serek, M., & Goren, R. (2001). Compounds interacting with the ethylene receptor. Proceedings of the 4th International Conference on Postharvest Science : Jerusalem, Israel, 26-31 March, 2000.

Sisler, E. C. (2001). Methods of blocking an ethylene response in plantsUSing cyclopropene derivatives. Washington, DC: U.S. Patent and Trademark Office.

Gurgel, P. V., Carbonell, R. G., & Swaisgood, H. E. (2001). Studies of the binding of alpha-lactalbumin to immobilized peptide ligands. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 49(12), 5765–5770. https://doi.org/10.1021/jf010462b

Zangger, K., Shen, G., Oz, G., Otvos, J. D., & Armitage, I. M. (2001). Oxidative dimerization in metallothionein is a result of intermolecular disulphide bonds between cysteines in the alpha- domain. Biochemical Journal (London, England : 1984), 359(2001 Oct 15), 353–360.

Galluzzi, JR, Cupples, L. A., Otvos, J. D., Wilson, P. W. F., Schaefer, E. J., & Ordovas, J. M. (2001). Association of the A/T54 polymorphism in the intestinal fatty acid binding protein with variations in plasma lipids in The Framingham Offspring Study. ATHEROSCLEROSIS, 159(2), 417–424. https://doi.org/10.1016/S0021-9150(01)00517-2

Sochacka, E. (2001). Efficient assessment of modified nucleoside stability under conditions of automated oligonucleotide synthesis: Characterization of the oxidation and oxidative desulfurization of 2-thiouridine. NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS, 20(10-11), 1871–1879. https://doi.org/10.1081/NCN-100107198

Sato, Y., Bao, W. L., Sederoff, R., & Whetten, R. (2001). Molecular cloning and expression of eight laccase cDNAs in loblolly pine (Pinus taeda). JOURNAL OF PLANT RESEARCH, 114(1114), 147–155. https://doi.org/10.1007/PL00013978

Pop, C., Chen, Y. R., Smith, B., Bose, K., Bobay, B., Tripathy, A., … Clark, A. C. (2001). Removal of the pro-domain does not affect the conformation of the procaspase-3 dimer. BIOCHEMISTRY, 40(47), 14224–14235. https://doi.org/10.1021/bi011037e

Platow, W., Nemanich, R. J., Sayers, D. E., Hartman, J. D., & Davis, R. F. (2001). Growth of epitaxial CoSi2 on 6H-SiC(0001)(Si). JOURNAL OF APPLIED PHYSICS, 90(12), 5924–5927. https://doi.org/10.1063/1.1412842

Thomas, M. R., Brown, D., Franzen, S., & Boxer, S. G. (2001). FTIR and resonance Raman studies of nitric oxide binding to H93G cavity mutants of myoglobin. BIOCHEMISTRY, 40(49), 15047–15056. https://doi.org/10.1021/bi011440l

Ralph, J., Lapierre, C., Marita, J. M., Kim, H., Lu, F. C., Hatfield, R. D., … Boerjan, W. (2001, July). Elucidation of new structures in lignins of CAD- and COMT-deficient plants by NMR. PHYTOCHEMISTRY, Vol. 57, pp. 993–1003. https://doi.org/10.1016/S0031-9422(01)00109-1

Muller, R., Stummann, B. M., Sisler, E. C., & Serek, M. (2001). Cultivar differences in regulation of ethylene production in miniature rose flowers (Rosa hybrida L.). Gartenbauwissenschaft, 66(1), 34–38.

Hesterberg, D., Chou, J. W., Hutchison, K. J., & Sayers, D. E. (2001). Bonding of Hg(II) to reduced organic, sulfur in humic acid as affected by S/Hg ratio. ENVIRONMENTAL SCIENCE & TECHNOLOGY, 35(13), 2741–2745. https://doi.org/10.1021/es001960o

Mucha, P., Szyk, A., Rekowski, P., Weiss, P. A., & Agris, P. F. (2001). Anticodon domain methylated nucleosides of yeast tRNA(Phe) are significant recognition determinants in the binding of a phage display selected peptide. BIOCHEMISTRY, 40(47), 14191–14199. https://doi.org/10.1021/bi010978o

Mattos, C., & Ringe, D. (2001). Proteins in organic solvents. CURRENT OPINION IN STRUCTURAL BIOLOGY, 11(6), 761–764. https://doi.org/10.1016/S0959-440X(01)00278-0

Egelkrout, E. M., Robertson, D., & Hanley-Bowdoin, L. (2001). Proliferating cell nuclear antigen transcription is repressed through an E2F consensus element and activated by geminivirus infection in mature leaves. PLANT CELL, 13(6), 1437–1452. https://doi.org/10.1105/tpc.13.6.1437

Shank, K. J., Su, P., Brglez, I., Boss, W. F., Dewey, R. E., & Boston, R. S. (2001). Induction of lipid metabolic enzymes during the endoplasmic reticulum stress response in plants. PLANT PHYSIOLOGY, 126(1), 267–277. https://doi.org/10.1104/pp.126.1.267

Whetten, R., Sun, Y. H., Zhang, Y., & Sederoff, R. (2001). Functional genomics and cell wall biosynthesis in loblolly pine. PLANT MOLECULAR BIOLOGY, 47(1-2), 275–291. https://doi.org/10.1023/A:1010652003395

Balakshin, M., Capanema, E., Chen, C. L., Gratzl, J., Kirkman, A., & Gracz, H. (2001). Biobleaching of pulp with dioxygen in the laccase-mediator system - reaction mechanisms for degradation of residual lignin. JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC, 13(1-3), 1–16. https://doi.org/10.1016/S1381-1177(00)00225-3

Platow, W., Wood, D. E., Burnette, J. E., Nemanich, R. J., & Sayers, D. E. (2001, March). XAFS studies of the formation of cobalt silicide on (root 3 x root 3) SiC(0001). JOURNAL OF SYNCHROTRON RADIATION, Vol. 8, pp. 475–477. https://doi.org/10.1107/S0909049500017921

Alcacio, T. E., Hesterberg, D., Chou, J. W., Martin, J. D., Beauchemin, S., & Sayers, D. E. (2001). Molecular scale characteristics of Cu(II) bonding in goethite-humate complexes. GEOCHIMICA ET COSMOCHIMICA ACTA, 65(9), 1355–1366. https://doi.org/10.1016/S0016-7037(01)00546-4

Sisler, E. C. (2001). Methods of blocking ethylene response in plants using cyclopropene derivatives. Washington, DC: U.S. Patent and Trademark Office.

Lucovsky, G., Rayner, G. B., Kang, D., Appel, G., Johnson, R. S., Zhang, Y., … Whitten, J. L. (2001). Electronic structure of noncrystalline transition metal silicate and aluminate alloys. APPLIED PHYSICS LETTERS, 79(12), 1775–1777. https://doi.org/10.1063/1.1404997

Freedman, D. S., Bowman, B. A., Srinivasan, SR, Berenson, G. S., & Otvos, J. D. (2001). Distribution and correlates of high-density lipoprotein subclasses among children and adolescents. METABOLISM-CLINICAL AND EXPERIMENTAL, 50(3), 370–376. https://doi.org/10.1053/meta.2001.21027

Huang, H. J., Sebastian, J., Strahl, B. D., Wu, J. C., & Miller, W. L. (2001). Transcriptional regulation of the ovine follicle-stimulating hormone-beta gene by activin and gonadotropin-releasing hormone (GnRH): Involvement of two proximal activator protein-1 sites for GnRH stimulation. ENDOCRINOLOGY, 142(6), 2267–2274. https://doi.org/10.1210/en.142.6.2267

Hardin, C. C., Perry, A. G., & White, K. (2001). [Review of Thermodynamic and kinetic characterization of the dissociation and assembly of quadruplex nucleic acids]. BIOPOLYMERS, 56(3), 147–194. https://doi.org/10.1002/1097-0282(2000/2001)56:3<147::aid-bip10011>3.0.co;2-n

Huang, H. J., Sebastian, J., Strahl, B. D., Wu, J. C., & Miller, W. L. (2001). The promoter for the ovine follicle-stimulating hormone-beta gene (FSH beta) confers FSH beta-like expression on luciferase in transgenic mice: Regulatory studies in vivo and in vitro. ENDOCRINOLOGY, 142(6), 2260–2266. https://doi.org/10.1210/en.142.6.2260

Sisler, E. C., Serek, M., Roh, K. A., & Goren, R. (2001). The effect of chemical structure on the antagonism by cyclopropenes of ethylene responses in banana. PLANT GROWTH REGULATION, 33(2), 107–110. https://doi.org/10.1023/A:1017540410426

Peele, C., Jordan, C. V., Muangsan, N., Turnage, M., Egelkrout, E., Eagle, P., … Robertson, D. (2001). Silencing of a meristematic gene using geminivirus-derived vectors. PLANT JOURNAL, 27(4), 357–366. https://doi.org/10.1046/j.1365-313x.2001.01080.x

Juzumiene, D., Shapkina, T., Kirillov, S., & Wollenzien, P. (2001). Short-range RNA-RNA crosslinking methods to determine rRNA structure and interactions. METHODS, 25(3), 333–343. https://doi.org/10.1006/meth.2001.1245

Swaisgood, H. E., Wang, Q.-W., & Allen, J. C. (2001). Protein ingredient for carrying lipophilic nutrients. Washington, DC: U.S. Patent and Trademark Office.

Tang, W., Whetten, R., & Sederoff, R. (2001). Genotypic control of high-frequency adventitious shoot regeneration via somatic organogenesis in loblolly pine. PLANT SCIENCE, 161(2), 267–272. https://doi.org/10.1016/S0168-9452(01)00394-6

Ryan, J. A., Zhang, P. C., Hesterberg, D., Chou, J., & Sayers, D. E. (2001). Formation of chloropyromorphite in a lead-contaminated soil amended with hydroxyapatite. ENVIRONMENTAL SCIENCE & TECHNOLOGY, 35(18), 3798–3803. https://doi.org/10.1021/es010634l

Bose, K., & Clark, A. C. (2001). Dimeric procaspase-3 unfolds via a four-state equilibrium process. BIOCHEMISTRY, 40(47), 14236–14242. https://doi.org/10.1021/bi0110387

Huang, H. J., Wu, J. C., Su, P., Zhirnov, O., & Miller, W. L. (2001). A novel role for bone morphogenetic proteins in the synthesis of follicle-stimulating hormone. ENDOCRINOLOGY, 142(6), 2275–2283. https://doi.org/10.1210/en.142.6.2275

Capanema, E. A., Balakshin, M. Y., Chen, C. L., Gratzl, J. S., & Gracz, H. (2001). Structural analysis of residual and technical lignins by H-1-C-13 correlation 2D NMR-spectroscopy. HOLZFORSCHUNG, 55(3), 302–308. https://doi.org/10.1515/HF.2001.050

Tangney, C. C., Mosca, L. J., Otvos, J. D., & Rosenson, R. S. (2001). Oral 17 beta-estradiol and medroxyprogesterone acetate therapy in postmenopausal women increases HDL particle size. ATHEROSCLEROSIS, 155(2), 425–430. https://doi.org/10.1016/s0021-9150(00)00577-3

Myburg, A. A., Remington, D. L., DM O'Malley, Sederoff, R. R., & Whetten, R. W. (2001). High-throughput AFLP analysis using infrared dye-labeled primers and an automated DNA sequencer. BIOTECHNIQUES, 30(2), 348-+. https://doi.org/10.2144/01302tt04

Platow, W., Wood, D. K., Tracy, K. M., Burnette, J. E., Nemanich, R. J., & Sayers, D. E. (2001). Formation of cobalt disilicide films on (root 3 x root 3)6H-SiC(0001). PHYSICAL REVIEW B, 63(11). https://doi.org/10.1103/physrevb.63.115312

Serek, M., & Sisler, E. C. (2001). Efficacy of inhibitors of ethylene binding in improvement of the postharvest characteristics of potted flowering plants. POSTHARVEST BIOLOGY AND TECHNOLOGY, 23(2), 161–166. https://doi.org/10.1016/S0925-5214(01)00109-0

Zhong, G. Y., Huberman, M., Feng, X. Q., Sisler, E. C., Holland, D., & Goren, R. (2001). Effect of 1-methyleyclopropene on ethylene-induced abscission in citrus. PHYSIOLOGIA PLANTARUM, 113(1), 134–141. https://doi.org/10.1034/j.1399-3054.2001.1130118.x

Pernasetti, F., Vasilyev, VV, Rosenberg, S. B., Bailey, J. S., Huang, H. J., Miller, W. L., & Mellon, P. L. (2001). Cell-specific transcriptional regulation of follicle-stimulating hormone-beta by activin and gonadotropin-releasing hormone in the L beta T2 pituitary gonadotrope cell model. ENDOCRINOLOGY, 142(6), 2284–2295. https://doi.org/10.1210/en.142.6.2284

Vaughn, J. L., Feher, V. A., Bracken, C., & Cavanagh, J. (2001). The DNA-binding domain in the Bacillus subtilis transition-state regulator AbrB employs significant motion for promiscuous DNA recognition. JOURNAL OF MOLECULAR BIOLOGY, 305(3), 429–439. https://doi.org/10.1006/jmbi.2000.4305

Tang, W., Sederoff, R., & Whetten, R. (2001). Regeneration of transgenic loblolly pine (Pinus taeda L.) from zygotic embryos transformed with Agrobacterium tumefaciens. PLANTA, 213(6), 981–989. https://doi.org/10.1007/s004250100566

Clare, D. A., Valentine, V. W., Catignani, G. L., & Swaisgood, H. E. (2001). Molecular design, expression, and affinity immobilization of a trypsin-streptavidin fusion protein. ENZYME AND MICROBIAL TECHNOLOGY, 28(6), 483–491. https://doi.org/10.1016/S0141-0229(00)00361-6

Pletnev, S. V., Zhang, W., Mukhopadhyay, S., Fisher, B. R., Hernandez, R., Brown, D. T., … Kuhn, R. J. (2001). Locations of carbohydrate sites on alphavirus glycoproteins show that E1 forms an icosahedral scaffold. CELL, 105(1), 127–136. https://doi.org/10.1016/S0092-8674(01)00302-6

Vardhanabhuti, B., Foegeding, E. A., McGuffey, M. K., Daubert, C. R., & Swaisgood, H. E. (2001). Gelation properties of dispersions containing polymerized and native whey protein isolate. FOOD HYDROCOLLOIDS, 15(2), 165–175. https://doi.org/10.1016/S0268-005X(00)00062-X

Gurgel, P. V., Carbonell, R. G., & Swaisgood, H. E. (2001). Identification of peptide ligands generated by combinatorial chemistry that bind alpha-lactalbumin. SEPARATION SCIENCE AND TECHNOLOGY, 36(11), 2411–2431. https://doi.org/10.1081/SS-100106100

Dolan, M. A., Babin, P., & Wollenzien, P. (2001). Construction and analysis of base-paired regions of the 16S rRNA in the 30S ribosomal subunit determined by constraint satisfaction molecular modelling. JOURNAL OF MOLECULAR GRAPHICS & MODELLING, 19(6), 495–513. https://doi.org/10.1016/S1093-3263(00)00097-8

Zhong, G. Y., Goren, R., Riov, J., Sisler, E. C., & Holland, D. (2001). Characterization of an ethylene-induced esterase gene isolated from Citrus sinensis by competitive hybridization. PHYSIOLOGIA PLANTARUM, 113(2), 267–274. https://doi.org/10.1034/j.1399-3054.2001.1130215.x

Miller, M., Dolinar, C., Cromwell, W., & Otvos, J. D. (2001). Effectiveness of high doses of Simvastatin as monotherapy in mixed hyperlipidemia. AMERICAN JOURNAL OF CARDIOLOGY, 87(2), 232-+. https://doi.org/10.1016/S0002-9149(00)01327-8

Qurollo, B. A., Bishop, P. E., & Hassan, H. M. (2001). Characterization of the iron superoxide dismutase gene of Azotobacter vinelandii: sodB may be essential for viability. CANADIAN JOURNAL OF MICROBIOLOGY, 47(1), 63–71. https://doi.org/10.1139/cjm-47-1-63

Russo, G. T., Meigs, J. B., Cupples, L. A., Demissie, S., Otvos, J. D., Wilson, P. W. F., … Ordovas, J. M. (2001). Association of the Sst-I polymorphism at the APOC3 gene locus with variations in lipid levels, lipoprotein subclass profiles and coronary heart disease risk: the Framingham offspring study. ATHEROSCLEROSIS, 158(1), 173–181. https://doi.org/10.1016/S0021-9150(01)00409-9

King, T. H., Decatur, W. A., Bertrand, E., Maxwell, E. S., & Fournier, M. J. (2001). A well-connected and conserved nucleoplasmic helicase is required for production of box C/D and H/ACA snoRNAs and localization of snoRNP proteins. MOLECULAR AND CELLULAR BIOLOGY, 21(22), 7731–7746. https://doi.org/10.1128/MCB.21.22.7731-7746.2001

Hernandez, R., Luo, T. C., & Brown, D. T. (2001). Exposure to low pH is not required for penetration of mosquito cells by Sindbis virus. JOURNAL OF VIROLOGY, 75(4), 2010–2013. https://doi.org/10.1128/jvi.75.4.2010-2013.2001

Settlage, S. B., Miller, A. B., Gruissem, W., & Hanley-Bowdoin, L. (2001). Dual interaction of a geminivirus replication accessory factor with a viral replication protein and a plant cell cycle regulator. VIROLOGY, 279(2), 570–576. https://doi.org/10.1006/viro.2000.0719

Juzumiene, D. I., & Wollenzien, P. (2001). Arrangement of the central pseudoknot region of 16S rRNA in the 30S ribosomal subunit determined by site-directed 4-thiouridine crosslinking. RNA, 7(1), 71–84. https://doi.org/10.1017/S1355838201001728

Cavanagh, J., & Venters, R. A. (2001, November). Protein dynamic studies move to a new time slot. NATURE STRUCTURAL BIOLOGY, Vol. 8, pp. 912–914. https://doi.org/10.1038/nsb1101-912

Lev-Yadun, S., & Sederoff, R. (2001, December). Grafting for transgene containment. https://doi.org/10.1038/nbt1201-1104

Dimmel, D. R., MacKay, J. J., Althen, E. M., Parks, C., & Sederoff, R. R. (2001). Pulping and bleaching of CAD-deficient wood. JOURNAL OF WOOD CHEMISTRY AND TECHNOLOGY, 21(1), 1–17. https://doi.org/10.1081/WCT-100102651

Robertson, G. P., Barry, P. J., Busta, F. F., Collier, R. J., Keen, N. T., Sederoff, R. R., … Urban, T. N. (2001). Moribund funding in agricultural research. https://doi.org/10.1126/science.291.5511.2089c