Works Published in 2004
Displaying works 21 - 40 of 57 in total
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2004 journal article
Variation an transcript abundance during somatic embryogenesis in gymnosperms
TREE PHYSIOLOGY, 24(10), 1073–1085.
author keywords: embryo development; gene expression; hybridization; microarray; Picea abies; Pinus taeda
MeSH headings : Cycadopsida / genetics; Cycadopsida / physiology; Gene Expression Regulation, Plant / physiology; Genetic Variation / physiology; Oligonucleotide Array Sequence Analysis; Picea / genetics; Picea / physiology; Seeds / genetics; Seeds / physiology; Transcription, Genetic / physiology; Trees / genetics; Trees / physiology
TL;DR:
Comparison of transcript levels between successive stages of embryogenesis allowed us to identify several genes that showed unique expression responses during normal development, including proteins involved in detoxification processes, methionine synthesis and utilization, and carbohydrate metabolism.
(via Semantic Scholar)
academic.oup.com (publisher PDF)
UN Sustainable Development Goal Categories
15. Life on Land
(Web of Science; OpenAlex)
Source: Web Of Science
Added: August 6, 2018
2004 review
Reprogramming plant gene expression: a prerequisite to geminivirus DNA replication
[Review of ]. MOLECULAR PLANT PATHOLOGY, 5(2), 149–156.
TL;DR:
Recent experiments showing that geminiviruses also modulate components of the retinoblastoma/E2F transcription regulatory network to induce quiescent plant cells to re-enter the cell cycle and regain the capacity to support high levels of DNA replication are discussed.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018
2004 journal article
Metabolic profiling: A new tool in the study of wood formation
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 52(6), 1427–1434.
author keywords: metabolic profiling; principal component analysis (PCA); loblolly pine; xylem tissue; lipid metabolites; polar metabolites
MeSH headings : Cellulose / analysis; Gas Chromatography-Mass Spectrometry; Genotype; Lipid Metabolism; Phenotype; Pinus taeda / chemistry; Pinus taeda / genetics; Pinus taeda / metabolism; Plant Extracts / chemistry; Wood
TL;DR:
The first application of metabolic profiling on differentiating xylem tissue of loblolly pine is reported, demonstrating the use of metabolic profiles for the study of wood-forming tissue and as a tool in functional genomics.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
15. Life on Land
(OpenAlex)
Source: Web Of Science
Added: August 6, 2018
2004 journal article
Improved image contrast of calcifications in breast tissue specimens using diffraction enhanced imaging
Physics in Medicine & Biology, 49(15), 3427–3439.
Source: NC State University Libraries
Added: August 6, 2018
2004 journal article
Conformational changes in Sindbis virions resulting from exposure to low pH and interactions with cells suggest that cell penetration may occur at the cell surface in the absence of membrane fusion
Virology, 324(2), 373–386.
Source: NC State University Libraries
Added: August 6, 2018
2004 personal communication
Rebuttal on a semi-pilot-scale procedure for isolating and purifying soybean (Glycine max) lectin
Fasina, Y. O., Swaisgood, H. E., Garlich, J. D., & Classen, H. L. (2004, May 19).
UN Sustainable Development Goal Categories
2. Zero Hunger
(OpenAlex)
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2004 journal article
Rapid preparative purification of West Nile and Sindbis virus PCR products utilizing a microbore anion-exchange column
Journal of Virological Methods, 120(2), 141–149.
Source: NC State University Libraries
Added: August 6, 2018
2004 patent
Geminivirus resistant transgenic plants expressing a mutant geminivirus AL3/C3 coding sequence
Washington, DC: U.S. Patent and Trademark Office.
Source: NC State University Libraries
Added: August 6, 2018
2004 journal article
Establishment of rapidly proliferating rice cell suspension culture and its characterization by fluorescence-activated cell sorting analysis
PLANT MOLECULAR BIOLOGY REPORTER, 22(3), 259–267.
author keywords: cell suspension culture; FACS; nuclei isolation; Oryza sativa L.; pectinase
TL;DR:
The studies described here demonstrate that NB2P culture can be a powerful tool for studying many important plant processes, including DNA replication and cell cycle-related pathways.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
15. Life on Land
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018
2004 journal article
Coordinated genetic regulation of growth and lignin revealed by quantitative trait locus analysis of cDNA microarray data in an interspecific backcross of eucalyptus
PLANT PHYSIOLOGY, 135(4), 2368–2378.
MeSH headings : Base Sequence; Chromosome Mapping; Crosses, Genetic; DNA Primers; Eucalyptus / genetics; Eucalyptus / growth & development; Eucalyptus / metabolism; Gene Expression Profiling; Gene Expression Regulation, Plant; Lignin / metabolism; Molecular Sequence Data; Oligonucleotide Array Sequence Analysis; Quantitative Trait Loci
TL;DR:
The power of integrating quantitative analysis of gene expression data and genetic map information to discover genetic and metabolic networks regulating complex biological traits is illustrated.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
15. Life on Land
(Web of Science; OpenAlex)
Source: Web Of Science
Added: August 6, 2018
2004 journal article
Sequential 2 '-O-methylation of archaeal pre-tRNA(Trp) nucleotides is guided by the intron-encoded but trans-acting box c/D ribonucleoprotein of pre-tRNA
JOURNAL OF BIOLOGICAL CHEMISTRY, 279(46), 47661–47671.
MeSH headings : Archaeal Proteins / genetics; Archaeal Proteins / metabolism; Gene Expression Regulation, Archaeal; Haloferax volcanii / genetics; Haloferax volcanii / metabolism; Introns; Methylation; Mutagenesis, Site-Directed; Nucleic Acid Conformation; RNA Precursors / chemistry; RNA Precursors / metabolism; RNA, Archaeal / chemistry; RNA, Archaeal / metabolism; RNA, Transfer, Trp / chemistry; RNA, Transfer, Trp / metabolism; Ribonucleoproteins, Small Nuclear / chemistry; Ribonucleoproteins, Small Nuclear / genetics; Ribonucleoproteins, Small Nuclear / metabolism
TL;DR:
It is demonstrated that pre-tRNA methylation is guided in trans by the intron-encoded box C/D RNPs positioned in either another pre-TRNATrp or in the excised intron, which could explain the observed accumulation of the excising H. volcanii pre- tR NATrp intron in vivo.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2004 journal article
Ionic interactions near the loop L4 are important for maintaining the active-site environment and the dimer stability of (pro)caspase 3
Biochemical Journal (London, England : 1984), 384(Dec 15 2004), 515–525.
Source: NC State University Libraries
Added: August 6, 2018
2004 journal article
Expression of a heterologous manganese superoxide dismutase gene in intestinal lactobacilli provides protection against hydrogen peroxide toxicity
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 70(8), 4702–4710.
MeSH headings : Cloning, Molecular; Humans; Hydrogen Peroxide / pharmacology; Intestines / microbiology; Lactobacillus / classification; Lactobacillus / drug effects; Lactobacillus / enzymology; Lactobacillus / genetics; Oxidative Stress / drug effects; Protein Biosynthesis; Streptococcus / enzymology; Streptococcus / genetics; Superoxide Dismutase / genetics; Superoxide Dismutase / metabolism; Transcription, Genetic
TL;DR:
The data show that MnSOD protects cells against hydrogen peroxide by removing O2·− and preventing the redox cycling of iron and is the first report of a sodA from S. thermophilus being expressed in other lactic acid bacteria.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2004 journal article
Efficiency and pattern of UV pulse laser-induced RNA-RNA cross-linking in the ribosome
NUCLEIC ACIDS RESEARCH, 32(4), 1518–1526.
MeSH headings : Base Sequence; Escherichia coli / genetics; Lasers; Molecular Sequence Data; Photons; Purine Nucleosides / radiation effects; RNA, Ribosomal, 16S / chemistry; RNA, Ribosomal, 16S / radiation effects; Ribosomes / radiation effects; Ultraviolet Rays
TL;DR:
Cross- linking frequencies obtained with one laser pulse are more correlated to internucleotide distances than arefrequency obtained with transilluminator irradiation, probably due to intensity-dependent photoreversal.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2004 journal article
Controlling PVA hydrogels with gamma-cyclodextrin
MACROMOLECULES, 37(25), 9620–9625.
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
6. Clean Water and Sanitation
(OpenAlex)
Source: Web Of Science
Added: August 6, 2018
2004 journal article
A 16S rRNA-tRNA product containing a nucleotide phototrimer and specific for tRNA in the P/E hybrid state in the Escherichia coli ribosome
NUCLEIC ACIDS RESEARCH, 32(22), 6548–6556.
MeSH headings : Base Sequence; Binding Sites; Escherichia coli / genetics; Kinetics; Light; Molecular Sequence Data; Nucleotides / analysis; Puromycin / pharmacology; RNA, Bacterial / chemistry; RNA, Ribosomal, 16S / chemistry; RNA, Ribosomal, 16S / metabolism; RNA, Transfer, Amino Acyl / chemistry; RNA, Transfer, Amino Acyl / metabolism; RNA, Transfer, Val / chemistry; RNA, Transfer, Val / metabolism; Ribosomes / chemistry; Ribosomes / metabolism; Ribosomes / radiation effects; Transcription, Genetic
TL;DR:
Results indicate an altered interaction between the tRNA anticodon and the 30S subunit for the t RNA in the P/E hybrid state compared with its interaction in the classic P/P state.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2004 journal article
Structural characterization of an intermolecular RNA-RNA interaction involved in the transcription regulation element of a bipartite plant virus
NUCLEIC ACIDS RESEARCH, 32(9), 2819–2828.
MeSH headings : Base Pairing; Base Sequence; Computer Simulation; Gene Expression Regulation, Viral; Macromolecular Substances; Models, Molecular; Molecular Sequence Data; Nuclear Magnetic Resonance, Biomolecular; Nucleic Acid Conformation; Promoter Regions, Genetic; RNA, Viral / chemistry; RNA, Viral / metabolism; Regulatory Sequences, Ribonucleic Acid; Tombusviridae / genetics; Transcription, Genetic
TL;DR:
The RCNMV TA structural model is similar to those for the Simian retrovirus frameshifting element and the Human immunodeficiency virus-1 dimerization kissing hairpins, suggesting a conservation of form and function.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018
2004 review
Nomenclature of the proteins of cows' milk - Sixth revision
[Review of ]. JOURNAL OF DAIRY SCIENCE, 87(6), 1641–1674.
author keywords: milk protein; structure; nomenclature; review
MeSH headings : Amino Acid Sequence; Animals; Caseins / chemistry; Caseins / classification; Cattle; Immunoglobulins / chemistry; Immunoglobulins / classification; Lactoglobulins; Milk Proteins / chemistry; Milk Proteins / classification; Molecular Sequence Data; Molecular Weight; Sequence Analysis, Protein; Sequence Homology, Amino Acid; Terminology as Topic; Whey Proteins
TL;DR:
Significant findings related to nomenclature and protein methodology are elucidation of several new genetic variants of the major milk proteins, establishment by sequencing techniques and sequence alignment of the bovine caseins and whey proteins as the reference point for the nomenClature of all homologous milk proteins.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2004 journal article
Extraction of information on the buildup and consumption of reactive intermediates from quadruplex DNA assembly time courses
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION, 1679(1), 59–64.
author keywords: intermediate species; quadruplex DNA assembly; time course
MeSH headings : Circular Dichroism; DNA / chemistry; Kinetics; Nucleic Acid Conformation
TL;DR:
A method was developed to detect the time course of the overall presence of intermediate species during K+-induced DNA quadruplex assembly from single-stranded d(TG4) oligonucleotides in experiments in which only the combined circular dichroisms of all species present could be measured directly.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: August 6, 2018
2004 journal article
Effect of sulfated polysaccharides on heat-induced structural changes in beta-lactoglobulin
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 52(12), 3975–3981.
author keywords: beta-lactoglobulin; thermal stability; heat denaturation; DSC; CD; dextran sulfate; lambda-carrageenan
MeSH headings : Carrageenan / pharmacology; Dextrans / pharmacology; Drug Stability; Hot Temperature; Lactoglobulins / chemistry; Polysaccharides / pharmacology; Protein Denaturation; Sulfates / pharmacology; Thermodynamics
TL;DR:
Assessment of changes in the denaturation thermodynamics and protein structure indicate that dextran sulfate and lambda-carrageenan can enhance the stability of beta-lactoglobulin and thereby inhibit heat denaturation and aggregation.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
6. Clean Water and Sanitation
(OpenAlex)
Source: Web Of Science
Added: August 6, 2018
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