Molecular & Structural Biochemistry

College of Agriculture and Life Sciences

Works Published in 2006

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Displaying works 1 - 20 of 54 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2006 journal article

A colorimetric assay for viral agents that produce cytopathic effects

Journal of Virological Methods, 135(1), 56–65.

By: C. Heldt n, R. Hernandez n, U. Mudiganti n, P. Gurgel, D. Brown n & R. Carbonell n

author keywords: MTT; TCID50; plaque assay; parvovirus; Sindbis virus
MeSH headings : Animals; Cell Line; Colorimetry / methods; Cricetinae; Cytopathogenic Effect, Viral; Dogs; Formazans / metabolism; Humans; Minute Virus of Mice / pathogenicity; Parvovirus, Canine / pathogenicity; Parvovirus, Porcine / pathogenicity; Reproducibility of Results; Sindbis Virus / pathogenicity; Swine; Tetrazolium Salts / metabolism; Viral Plaque Assay; Viruses / pathogenicity
Source: Crossref
Added: October 9, 2021

2006 journal article

Uncoupling the Enzymatic and Autoprocessing Activities of Helicobacter pylori γ-Glutamyltranspeptidase

Journal of Biological Chemistry, 281(28), 19029–19037.

By: G. Boanca*, A. Sand* & J. Barycki*

MeSH headings : Bacterial Proteins / chemistry; Biochemistry / methods; Helicobacter pylori / enzymology; Hydrogen-Ion Concentration; Hydrolysis; Kinetics; Peptides / chemistry; Protein Structure, Tertiary; Recombinant Proteins / chemistry; Threonine / chemistry; Time Factors; gamma-Glutamyltransferase / chemistry
Source: Crossref
Added: October 29, 2020

2006 journal article

Structure, binding interface and hydrophobic transitions of Ca2+-loaded calbindin-D28K

Nature Structural & Molecular Biology, 13(7), 641–647.

By: D. Kojetin n, R. Venters*, D. Kordys n, R. Thompson n, R. Kumar* & J. Cavanagh n

MeSH headings : Amino Acid Sequence; Animals; Binding Sites; Calbindins; Calcium / metabolism; Cloning, Molecular; Hydrogen Bonding; Magnetic Resonance Spectroscopy; Models, Molecular; Peptides / chemistry; Protein Folding; Protein Structure, Secondary; Rats; Recombinant Proteins / chemistry; Recombinant Proteins / metabolism; S100 Calcium Binding Protein G / chemistry; S100 Calcium Binding Protein G / metabolism
Source: Crossref
Added: August 28, 2020

2006 journal article

A preliminary neutron diffraction study of rasburicase, a recombinant urate oxidase enzyme, complexed with 8-azaxanthin.

Structural Biology and Crystallization Communications, 62(Pt 3), 306–309,

By: M. Budayova-Spano*, F. Bonneté, N. Ferté, M. El Hajji*, F. Meilleur*, M. Blakeley*, B. Castro*, F. Section

MeSH headings : Binding Sites; Crystallization / methods; Deuterium Oxide; Neutron Diffraction / methods; Recombinant Proteins / chemistry; Saccharomyces cerevisiae / metabolism; Urate Oxidase / chemistry; Xanthines / chemistry
Source: ORCID
Added: January 6, 2020

2006 journal article

Comparison of hydrogen determination with X-ray and neutron crystallography in a human aldose reductase-inhibitor complex.

European Biophysics Journal : EBJ, 35(7), 577–583,

By: M. Blakeley*, A. Mitschler*, I. Hazemann*, F. Meilleur*, D. Myles* & A. Podjarny*

MeSH headings : Aldehyde Reductase / antagonists & inhibitors; Aldehyde Reductase / chemistry; Aldehyde Reductase / metabolism; Binding Sites; Crystallization; Crystallography, X-Ray; Deuterium / chemistry; Humans; Hydrogen / chemistry; Hydrogen Bonding; Models, Molecular; Molecular Structure; NADP / metabolism; Neutron Diffraction; Protein Conformation; Protons
Source: ORCID
Added: January 6, 2020

2006 journal article

A quasi-Laue neutron crystallographic study of d-xylose isomerase

European Biophysics Journal, 35(7), 601–609.

MeSH headings : Aldose-Ketose Isomerases / chemistry; Aldose-Ketose Isomerases / metabolism; Binding Sites; Catalysis; Crystallography, X-Ray; Hydrogen / chemistry; Models, Chemical; Neutron Diffraction; Neutrons; Protein Binding; Streptomyces / enzymology; Xylose / metabolism
Source: ORCID
Added: January 6, 2020

2006 journal article

Neutron Laue macromolecular crystallography

European Biophysics Journal, 35(7), 611–620.

MeSH headings : Crystallography / trends; Deuterium / chemistry; Forecasting; Hydrogen Bonding; Macromolecular Substances / chemistry; Models, Molecular; Neutron Diffraction; Neutrons
Source: ORCID
Added: January 6, 2020

2006 article

MARCKS related peptide improves airway obstruction related to mucus secretion in a mouse model of asthma.

404nOtfound, Vol. 3, p. A713.

By: A. Agrawal, R. Subramannian, K. Adler, A. Ram, B. Ghosh, M. Farim, B. Dickey

Source: NC State University Libraries
Added: August 6, 2018

2006 patent

Method to inhibit ethylene responses in plants

Washington, DC: U.S. Patent and Trademark Office.

By: R. Jacobson, M. Kelly, F. Wehmeyer & E. Sisler

Source: NC State University Libraries
Added: August 6, 2018

2006 journal article

Geminivirus infection up-regulates the expression of two Arabidopsis protein kinases related to yeast SNF1-and mammalian AMPK-activating kinases

PLANT PHYSIOLOGY, 142(4), 1642–1655.

MeSH headings : AMP-Activated Protein Kinase Kinases; Amino Acid Sequence; Animals; Arabidopsis / enzymology; Arabidopsis / genetics; Arabidopsis / virology; Arabidopsis Proteins / chemistry; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Flowers / genetics; Flowers / metabolism; Flowers / virology; Fungal Proteins / chemistry; Geminiviridae / physiology; Gene Expression Regulation, Plant; Genetic Complementation Test; Molecular Sequence Data; Phylogeny; Plant Diseases / virology; Plant Leaves / genetics; Plant Leaves / metabolism; Plant Leaves / virology; Plant Shoots / genetics; Plant Shoots / metabolism; Plant Shoots / virology; Protein Kinases / chemistry; Protein Serine-Threonine Kinases / chemistry; Protein Serine-Threonine Kinases / genetics; Protein Serine-Threonine Kinases / metabolism; RNA, Messenger / metabolism; Sequence Alignment; Two-Hybrid System Techniques; Up-Regulation; Viral Proteins / metabolism
Sources: Web Of Science, ORCID
Added: August 6, 2018

2006 journal article

Collision-induced dissociative chemical cross-linking reagents and methodology: Applications to protein structural characterization using tandem mass spectrometry analysis

ANALYTICAL CHEMISTRY, 78(23), 8059–8068.

MeSH headings : Amino Acid Sequence; Animals; Aspartic Acid / chemistry; Cross-Linking Reagents / chemistry; Glutathione Transferase / chemistry; Glutathione Transferase / genetics; Glutathione Transferase / metabolism; Models, Molecular; Molecular Sequence Data; Proline / chemistry; Protein Structure, Tertiary; Recombinant Fusion Proteins / chemistry; Recombinant Fusion Proteins / genetics; Recombinant Fusion Proteins / metabolism; Schistosoma japonicum / genetics; Schistosoma japonicum / metabolism; Serum Albumin, Bovine / chemistry; Serum Albumin, Bovine / genetics; Serum Albumin, Bovine / metabolism; Tandem Mass Spectrometry / methods
Source: Web Of Science
Added: August 6, 2018

2006 journal article

Oral hydration, parotid salivation and the perceived pleasantness of small water volumes

PHYSIOLOGY & BEHAVIOR, 89(5), 724–734.

By: S. Guest*, G. Essick*, M. Young*, A. Lee n, N. Phillips* & F. McGlone*

author keywords: mouth dryness; water temperature; water pleasantness; salivation
MeSH headings : Adult; Analysis of Variance; Dose-Response Relationship, Drug; Euphoria / drug effects; Female; Humans; Male; Mouth / drug effects; Mouth / physiology; Parotid Gland / metabolism; Salivation / drug effects; Salivation / physiology; Taste / physiology; Temperature; Water / pharmacology
Source: Web Of Science
Added: August 6, 2018

2006 journal article

Detection of transcriptional difference of porcine imprinted genes using different microarray platforms

BMC Genomics, 7.

By: S. Tsai, B. Mir, A. Martin, J. Estrada, S. Bischoff, W. Hsieh, J. Cassady, B. Freking ...

Source: NC State University Libraries
Added: August 6, 2018

2006 journal article

tRNA regulation of gene expression: Interactions of an mRNA 5 '-UTR with a regulatory tRNA

RNA, 12(7), 1254–1261.

By: A. Nelson, T. Henkin & P. Agris*

author keywords: gene regulation; Gram-positive bacteria; tRNA; RNA experimental model
MeSH headings : 5' Untranslated Regions / genetics; Bacillus subtilis / genetics; Base Sequence; Electrophoresis, Polyacrylamide Gel; Gene Expression Regulation; Models, Molecular; Nucleic Acid Conformation; RNA, Bacterial / chemistry; RNA, Bacterial / genetics; RNA, Messenger / chemistry; RNA, Messenger / genetics; RNA, Transfer / chemistry; RNA, Transfer / genetics; RNA, Transfer / metabolism; Spectrometry, Fluorescence
Source: Web Of Science
Added: August 6, 2018

2006 journal article

Transcriptional and functional analysis of oxalyl-coenzyme A (CoA) decarboxylase and formyl-CoA transferase genes from Lactobacillus acidophilus

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 72(3), 1891–1899.

By: M. Azcarate-Peril n, J. Bruno-Barcena*, H. Hassan* & T. Klaenhammer n

MeSH headings : Carboxy-Lyases / genetics; Carboxy-Lyases / metabolism; Coenzyme A-Transferases / genetics; Coenzyme A-Transferases / metabolism; Gene Expression Regulation, Bacterial; Lactobacillus acidophilus / enzymology; Lactobacillus acidophilus / genetics; Lactobacillus acidophilus / growth & development; Oligonucleotide Array Sequence Analysis; Operon; Oxalates / metabolism; Reverse Transcriptase Polymerase Chain Reaction; Transcription, Genetic
Sources: Web Of Science, ORCID
Added: August 6, 2018

2006 review

The discovery and development of compounds counteracting ethylene at the receptor level

[Review of ]. BIOTECHNOLOGY ADVANCES, 24(4), 357–367.

By: E. Sisler n

author keywords: ethylene; ethylene agonist; ethylene antagonist; receptor; 1-methylcyclopropene (1-MCP)
MeSH headings : Cyclopropanes / pharmacology; Ethylenes / antagonists & inhibitors; Ethylenes / pharmacology; Flowers / cytology; Flowers / drug effects; Flowers / growth & development; Genes, Plant; Plant Growth Regulators / pharmacology; Plants, Genetically Modified; Receptors, Cell Surface / drug effects; Receptors, Cell Surface / genetics
Source: Web Of Science
Added: August 6, 2018

2006 journal article

Role of loop bundle hydrogen bonds in the maturation and activity of (pro) caspase-3

BIOCHEMISTRY, 45(44), 13249–13263.

MeSH headings : Amino Acid Sequence; Base Sequence; Caspase 3 / chemistry; Caspase 3 / metabolism; Crystallography; DNA Primers; Hydrogen Bonding; Hydrogen-Ion Concentration; Hydrolysis; Models, Molecular; Molecular Sequence Data; Protein Conformation; Spectrometry, Fluorescence
Source: Web Of Science
Added: August 6, 2018

2006 journal article

Role of a conserved tripeptide in the endodomain of Sindbis virus glycoprotein E2 in virus assembly and function

JOURNAL OF GENERAL VIROLOGY, 87, 657–664.

By: J. West n & D. Brown n

MeSH headings : Acids; Amino Acid Sequence; Animals; Cell Fusion; Cell Line; Cricetinae; Molecular Sequence Data; Protein Structure, Tertiary / genetics; Protein Structure, Tertiary / physiology; Sindbis Virus / pathogenicity; Sindbis Virus / physiology; Viral Envelope Proteins / chemistry; Viral Envelope Proteins / genetics; Viral Envelope Proteins / physiology; Virulence; Virus Assembly
Source: Web Of Science
Added: August 6, 2018

2006 journal article

Polymerization of styrene in gamma-cyclodextrin channels: Lightly rotaxanated polystyrenes with altered stereosequences

POLYMER, 47(20), 6948–6955.

By: T. Uyar n, H. Gracz n, M. Rusa n, I. Shin*, A. El-Shafei n & A. Tonelli n

author keywords: cyclodextrin; inclusion compound; polystyrene
Source: Web Of Science
Added: August 6, 2018

2006 journal article

Peptide aptamers that bind to a geminivirus replication protein interfere with viral replication in plant cells

JOURNAL OF VIROLOGY, 80(12), 5841–5853.

MeSH headings : Aptamers, Peptide / pharmacology; DNA, Viral / analysis; Geminiviridae / chemistry; Geminiviridae / drug effects; Geminiviridae / physiology; Peptide Library; Plant Cells; Plant Viruses / drug effects; Plants / virology; Plants, Genetically Modified; Thioredoxins / genetics; Thioredoxins / metabolism; Transfection; Two-Hybrid System Techniques; Viral Proteins / antagonists & inhibitors; Viral Proteins / genetics; Viral Proteins / metabolism; Viral Proteins / physiology; Virus Replication / drug effects
Sources: Web Of Science, ORCID
Added: August 6, 2018