Works Published in 2023
Displaying all 20 works
Sorted by most recent date added to the index first, which may not be the same as publication date order.
2023 journal article
Comparative transcriptome analysis reveals candidate genes for cold stress response and early flowering in pineapple
SCIENTIFIC REPORTS, 13(1).
www.nature.com (publisher PDF)
Sources: Web Of Science, NC State University Libraries
Added: February 26, 2024
2023 article
A normalization method that controls for total RNA abundance affects the identification of differentially expressed genes, revealing bias toward morning-expressed responses
Laosuntisuk, K., Vennapusa, A., Somayanda, I. M., Leman, A. R., Jagadish, S. V. K., & Doherty, C. J. (2023, October 29).
TL;DR:
It is demonstrated that adding external RNA spike-ins as a normalization control produces differences in RNA-Seq analysis compared to traditional normalization methods, even between two times of day in untreated plants.
(via Semantic Scholar)
Source: ORCID
Added: February 1, 2024
2023 journal article
Structural analysis and functional evaluation of the disordered ß-hexosyltransferase region from <i>Hamamotoa (Sporobolomyces) singularis</i>
FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY, 11.
author keywords: disorder; expression; kinetics; mutagenesis; transglycosylation; Hamamotoa singularis
TL;DR:
Functional analysis of each glycosylation site found within the C-terminal domain revealed reduced total secreted protein activity, indicating that glycosylation at all four locations is required by the host for the secretion of active enzyme and independent of the removed disordered N-terminal region.
(via Semantic Scholar)
Sources: Web Of Science, NC State University Libraries
Added: January 16, 2024
2023 journal article
SEGS-1 a cassava genomic sequence increases the severity of African cassava mosaic virus infection in <i>Arabidopsis</i> thaliana
FRONTIERS IN PLANT SCIENCE, 14.
author keywords: SEGS-1; begomovirus; ACMV; Arabidopsis thaliana; cassava
TL;DR:
It is demonstrated that SEGS-1 can function in a heterologous host to increase disease severity in Arabidopsis thaliana plants that are co-inoculated with African cassava mosaic virus (ACMV) and SEGs-1 sequences.
(via Semantic Scholar)
Sources: Web Of Science, ORCID
Added: January 2, 2024
2023 journal article
Cellulose Acetate-Stabilized Pickering Emulsions: Preparation, Rheology, and Incorporation of Agricultural Active Ingredients
ACS SUSTAINABLE CHEMISTRY & ENGINEERING, 11(42), 15178–15191.
author keywords: nonsporulating microbes; double yielding; Pseudomonas simiae; microstructure; controlledrelease
UN Sustainable Development Goal Categories
2. Zero Hunger
(OpenAlex)
Source: Web Of Science
Added: October 30, 2023
2023 journal article
Multiplex CRISPR editing of wood for sustainable fiber production
SCIENCE, 381(6654), 216-+.
TL;DR:
This work demonstrates that genome editing can be harnessed for breeding more efficient trees, which will provide timely opportunities for sustainable forestry and a more efficient bioeconomy.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: October 16, 2023
2023 journal article
A Ferric-Superoxide Intermediate Initiates P450-Catalyzed Cyclic Dipeptide Dimerization
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY.
Source: Web Of Science
Added: September 11, 2023
2023 article
Identifying the enzyme responsible for initiating aerobic acetylene metabolism in Rhodococcus rhodochrous ATCC 33258
JOURNAL OF BIOLOGICAL CHEMISTRY, Vol. 299, pp. S369–S369.
Source: Web Of Science
Added: September 11, 2023
2023 journal article
Genome segment ratios change during whitefly transmission of two bipartite cassava mosaic begomoviruses
SCIENTIFIC REPORTS, 13(1).
MeSH headings : Animals; Begomovirus / genetics; Manihot; Hemiptera; Plants; Vegetables; Plant Diseases
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 7, 2023
2023 journal article
The inhibitor of & kappa;B kinase & beta; (IKK & beta;) phosphorylates I & kappa;B & alpha; twice in a single binding event through a sequential mechanism
The inhibitor of & kappa;B kinase & beta; (IKK & beta;) phosphorylates I & kappa;B & alpha; twice in a single binding event through a sequential mechanism. JOURNAL OF BIOLOGICAL CHEMISTRY, 299(1).
MeSH headings : Humans; I-kappa B Kinase / genetics; I-kappa B Kinase / metabolism; Kinetics; NF-kappa B / metabolism; NF-KappaB Inhibitor alpha / genetics; NF-KappaB Inhibitor alpha / metabolism; Phosphorylation; Protein Serine-Threonine Kinases / metabolism
TL;DR:
The data suggest a model wherein, IKKβ phosphorylates IκBα at Ser32 followed by Ser36 within a single binding event, suggesting that phosphorylation of Ser32 increases the phosphorylated rate of Ser36.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: July 3, 2023
2023 journal article
Cassava begomovirus species diversity changes during plant vegetative cycles
FRONTIERS IN MICROBIOLOGY, 14.
author keywords: plant virus; Cassava (Manihot esculenta); vegetative (asexual) propagation; vector transmission; whitefly (Bemisia tabaci)
TL;DR:
The results suggest that whitefly transmission and vegetative transmission lead to different outcomes for ACMV and EACMV-like viruses.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Sources: Web Of Science, ORCID
Added: July 3, 2023
2023 review
The Game of Timing: Circadian Rhythms Intersect with Changing Environments
[Review of ]. ANNUAL REVIEW OF PLANT BIOLOGY, 74, 511–538.
author keywords: circadian; rhythms; climate change; signaling networks; environmental adaptation
MeSH headings : Plant Breeding; Circadian Rhythm / physiology; Circadian Clocks; Signal Transduction
TL;DR:
This review examines what the authors know about the circadian clock in diverse plant species, the challenges with extrapolating data from controlled environments, and the need to anticipate how plants will respond to climate change.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: June 12, 2023
2023 article
Neutron Scattering in the Biological Sciences: Techniques And Applications
Meilleur, F. (2023, January). JOVE-JOURNAL OF VISUALIZED EXPERIMENTS, Vol. 1.
TL;DR:
ARTICLES DISCUSSED Vahdatahar, E., Junius, N., Budayova-Spano, M. and Stingaciu, L.-R.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID
Added: June 12, 2023
2023 journal article
Weed-induced changes in the maize root transcriptome reveal transcription factors and physiological processes impacted early in crop-weed interactions
AOB PLANTS, 15(3).
author keywords: plant-plant interaction; gene regulation; network analysis
TL;DR:
Investigating the impact of signals from a below-ground competitor on the maize root transcriptome when most vulnerable to weed pressure found the role of several specific proteins involved in ABA signalling as being important for the initiation of the early response of maize to weeds.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
15. Life on Land
(Web of Science)
Sources: Web Of Science, ORCID
Added: June 5, 2023
2023 journal article
Overexpression of a gibberellin 20-oxidase gene in poplar xylem led to an increase in the size of nanocellulose fibrils and improved paper properties
CARBOHYDRATE POLYMERS, 314.
author keywords: Nanocellulose microfibril; Poplar; Gibberellin; Pulp
MeSH headings : Gibberellins; Xylem / genetics; Xylem / metabolism; Mixed Function Oxygenases / metabolism; Wood / metabolism; Cellulose / chemistry; Arabidopsis / genetics; Arabidopsis / metabolism; Populus / genetics; Populus / metabolism
Source: Web Of Science
Added: May 30, 2023
2023 review
Auxin-cytokinin interplay shapes root functionality under low-temperature stress
[Review of ]. TRENDS IN PLANT SCIENCE, 28(4), 447–459.
MeSH headings : Cytokinins / physiology; Indoleacetic Acids; Temperature; Meristem / genetics; Plant Roots / physiology; Arabidopsis Proteins / metabolism; Arabidopsis / genetics; Gene Expression Regulation, Plant / genetics
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science)
13. Climate Action
(Web of Science)
Sources: Web Of Science, ORCID
Added: April 17, 2023
2023 journal article
Tizoxanide Antiviral Activity on Dengue Virus Replication
VIRUSES-BASEL, 15(3).
author keywords: antiviral; tizoxanide; dengue virus; virucidal activity
MeSH headings : Chlorocebus aethiops; Animals; Humans; Antiviral Agents / pharmacology; Antiviral Agents / therapeutic use; Vero Cells; Dengue / drug therapy; Dengue Virus / genetics; Proteomics; Virus Replication
TL;DR:
TIZ is a promising therapeutic molecule for the treatment of DENV-2 infections and the study of the protein profile of infected not-treated and infected-treated Vero cells showed that TIZ interferes with cellular processes such as intracellular trafficking and vesicle-mediated transport and post-translational modifications when added after infection.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science; OpenAlex)
Source: Web Of Science
Added: April 17, 2023
2023 journal article
Hybrid spatial-temporal Mueller matrix imaging spectropolarimeter for high throughput plant phenotyping
APPLIED OPTICS, 62(8), 2078–2091.
MeSH headings : Multimodal Imaging; Spectrum Analysis; Plant Leaves; Zea mays
TL;DR:
Results indicate that subtle variations in retardance and diattenuation versus leaf canopy position may be present before they are clearly visible in the spectral transmission, as indicated in the optimization procedure, simulations, and calibration methods.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
15. Life on Land
(OpenAlex)
Sources: Web Of Science, ORCID
Added: April 11, 2023
2023 article
Chromosome-level genome assembly of a triploid poplar Populus alba 'Berolinensis'
Chen, S., Yu, Y., Wang, X., Wang, S., Zhang, T., Zhou, Y., … Chen, S. (2023, February 27). MOLECULAR ECOLOGY RESOURCES.
author keywords: allele; allopolyploid; genome; Populus alba 'Berolinensis'; salinity stress; triploid
MeSH headings : Triploidy; Populus / genetics; Plant Breeding; Diploidy; Chromosomes
TL;DR:
This study focused on the allelic genomic interactions in P. alba ‘Berolinensis’ and generated a high‐quality chromosome‐level genome assembly consisting of 19 allelic chromosomes, and found that some stress‐related genes such as RD22 and LEA7 exhibited sequence differences between different haploid genomes.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Source: Web Of Science
Added: March 27, 2023
2023 journal article
Joint X-ray/neutron structure of Lentinus similis AA9_A at room temperature
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 79, 1–7.
author keywords: lytic polysaccharide mono-oxygenases; Lentinus similis AA9_A; copper metalloenzymes; protonation states; neutron crystallography
MeSH headings : X-Rays; Copper; Temperature; Crystallography, X-Ray; Polysaccharides / chemistry
Sources: ORCID, Web Of Science, NC State University Libraries
Added: November 25, 2022
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