Works Published in 2011

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Displaying works 521 - 540 of 685 in total

Sorted by most recent date added to the index first, which may not be the same as publication date order.

2011 journal article

Design, modeling, fabrication, and evaluation of the air amplifier for improved detection of biomolecules by electrospray ionization mass spectrometry

INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, 300(2-3), 99–107.

By: G. Robichaud*, R. Dixon, A. Potturi, D. Cassidy*, J. Edwards*, A. Sohn*, T. Dow*, D. Muddiman*

author keywords: Air amplifier; Electrospray ionization; Modeling; Detection limits
TL;DR: A computer simulation that accurately portrays actual conditions and the results from these simulations are corroborated by the experimental data is developed, which can be used to predict outcomes from future designs resulting in a design process that is efficient in terms of financial cost and time. (via Semantic Scholar)
UN Sustainable Development Goal Categories
7. Affordable and Clean Energy (OpenAlex)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

Comparison of fatty acid, cholesterol, and vitamin A and E composition in eggs from hens housed in conventional cage and range production facilities

POULTRY SCIENCE, 90(7), 1600–1608.

By: K. Anderson n

author keywords: cage; chicken; egg nutrient composition; range
MeSH headings : Animal Husbandry / methods; Animals; Chickens / growth & development; Cholesterol / analysis; Eggs / analysis; Fatty Acids / analysis; Female; Random Allocation; Vitamin A / analysis; Vitamin E / analysis
TL;DR: Although range production did not influence the cholesterol level in the egg, there was an increase in fat levels in eggs produced on the range, and vitamin A and E levels were not affected by the husbandry to which the hens were exposed but were lowest at 62 wk of age. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (OpenAlex)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

Comparison of environmental and egg microbiology associated with conventional and free-range laying hen management

POULTRY SCIENCE, 90(9), 2063–2068.

By: D. Jones*, K. Anderson n & M. Musgrove*

author keywords: egg microbiology; conventional cage; free-range; environmental; shell egg
MeSH headings : Animal Husbandry / methods; Animals; Chickens; Environmental Microbiology; Female; Food Microbiology; Oviposition; Ovum / microbiology; Seasons
TL;DR: Season of the year played a role in both environmental and egg microbial levels, and understanding the differences in microbial populations present on conventional cage-produced and free range-produced eggs can lead to the development of effective cleaning procedures, enhancing food safety. (via Semantic Scholar)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

Combining an evolution-guided clustering algorithm and haplotype-based LRT in family association studies

BMC Genetics, 12.

By: M. Lee, J. Tzeng, S. Huang & C. Hsiao

Source: NC State University Libraries
Added: August 6, 2018

2011 journal article

Biological pathway selection through nonlinear dimension reduction

BIOSTATISTICS, 12(3), 429–444.

By: H. Zhu n & L. Li n

author keywords: Dimension reduction; Generalized additive model; Kernel methods; Pathway selection; Sliced inverse regression
MeSH headings : Computational Biology / methods; Computer Simulation; Data Interpretation, Statistical; Gene Expression Profiling / methods; Glioblastoma / genetics; Humans; Models, Genetic; Models, Statistical; Oligonucleotide Array Sequence Analysis / methods; Principal Component Analysis
TL;DR: This article proposes a 2-step procedure for identifying pathways that are related to and influence the clinical phenotype, and proposes a nonlinear dimension reduction method, which permits flexible within-pathway gene interactions as well as nonlinear pathway effects on the response. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2011 journal article

Bartonella spp. in Feral Pigs, Southeastern United States

Emerging Infectious Diseases, 17(5), 893–895.

By: A. Beard n, R. Maggi*, S. Kennedy-Stoskopf*, N. Cherry*, M. Sandfoss, C. DePerno*, E. Breitschwerdt*

MeSH headings : Animals; Bartonella / genetics; Bartonella Infections / epidemiology; Bartonella Infections / microbiology; DNA, Ribosomal Spacer / genetics; Genes, Bacterial / genetics; Genotype; Male; Phylogeny; Sequence Homology; Southeastern United States / epidemiology; Swine; Swine Diseases / epidemiology; Swine Diseases / microbiology
TL;DR: In conjunction with efforts to assess pathogen exposure in feral pigs from the southeastern United States, amplified Bartonella henselae, B. koehlerae, and B. vinsonii subsp. (via Semantic Scholar)
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2011 journal article

Assessment of urine solute and matrix effects on the performance of an enzyme-linked immunosorbent assay for measurement of interleukin-6 in dog urine

JOURNAL OF VETERINARY DIAGNOSTIC INVESTIGATION, 23(2), 316–320.

author keywords: Cytokine; enzyme-linked immunosorbent assay; interleukin-6; matrix; urine
TL;DR: The role of urine pH, USG, and matrix are examined while optimizing a canine-specific chemiluminescent ELISA for the measurement of IL-6 in the urine of dogs to underscores the importance of critically optimizing testing modalities for biomarkers, particularly if they are immunologic in origin. (via Semantic Scholar)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

A novel alpha-d-galactosynthase from Thermotoga maritima converts beta-d-galactopyranosyl azide to alpha-galacto-oligosaccharides

GLYCOBIOLOGY, 21(4), 448–456.

author keywords: alpha-galacto-oligosaccharides; glycosynthase; alpha-gal epitope; carbohydrate synthesis; protein engineering
MeSH headings : Aspartic Acid / chemistry; Azides / chemistry; Chromatography, Thin Layer; Disaccharides / biosynthesis; Galactose / metabolism; Glycine / chemistry; Kinetics; Mutagenesis, Site-Directed; Mutant Proteins / chemistry; Mutant Proteins / genetics; Mutant Proteins / metabolism; Protein Engineering; Thermotoga maritima / enzymology; alpha-Galactosidase / chemistry; alpha-Galactosidase / genetics; alpha-Galactosidase / metabolism
TL;DR: Results open a new avenue to the practical synthesis of biologically interesting α-galacto-oligosaccharides and demonstrate more widespread use of β-glycosyl-azide as donors, confirming their utility to expand the repertoire of glycosynthases. (via Semantic Scholar)
UN Sustainable Development Goal Categories
14. Life Below Water (OpenAlex)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

A flexible class of models for data arising from a 'thorough QT/QTc study'

PHARMACEUTICAL STATISTICS, 10(2), 122–127.

By: S. Anand n & S. Ghosh n

Contributors: S. Anand n & S. Ghosh n

author keywords: Bayesian model selection; DIC; ICH E14; MCMC; QT/QTc; thorough QT/QTc study
MeSH headings : Bayes Theorem; Data Interpretation, Statistical; Electrocardiography; Humans; Models, Statistical; Multivariate Analysis
TL;DR: A flexible class of parametric models is proposed to address the limitations of the currently used models and superior performance of the proposed models over the current models is illustrated through a real dataset obtained from a GlaxoSmithKline conducted ‘thorough QT/QTc study’. (via Semantic Scholar)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

comK prophage junction fragments as markers for listeria monocytogenes genotypes unique to individual meat and poultry processing plants and a model for rapid niche-specific adaptation, biofilm formation, and persistence

Applied and Environmental Microbiology, 77(10), 3279–3292.

By: B. Verghese*, M. Lok*, J. Wen*, V. Alessandria*, Y. Chen*, S. Kathariou n, S. Knabel*

MeSH headings : Animals; Bacterial Typing Techniques; Biofilms / growth & development; DNA, Bacterial / chemistry; DNA, Bacterial / genetics; Environmental Microbiology; Evolution, Molecular; Food-Processing Industry; Genetic Variation; Genotype; Listeria monocytogenes / classification; Listeria monocytogenes / genetics; Listeria monocytogenes / isolation & purification; Listeria monocytogenes / virology; Meat / microbiology; Molecular Epidemiology; Molecular Sequence Data; Prophages / genetics; Recombination, Genetic; Sequence Analysis, DNA
TL;DR: A novel model is proposed in which the concept of defective comK prophage was replaced with the rapid adaptation island (RAI) and genes within the RAI were recharacterized as “adaptons,” as these genes may allow L. monocytogenes to rapidly adapt to different food processing facilities and foods. (via Semantic Scholar)
Source: NC State University Libraries
Added: August 6, 2018

2011 journal article

Transmission of Methicillin-Resistant Staphylococcus aureus between Human and Hamster

JOURNAL OF CLINICAL MICROBIOLOGY, 49(4), 1679–1680.

MeSH headings : Adult; Animals; Bacterial Proteins / genetics; Bacterial Typing Techniques; Carrier State / microbiology; Carrier State / transmission; Cricetinae; DNA, Bacterial / genetics; Electrophoresis, Gel, Pulsed-Field; Female; Humans; Male; Methicillin-Resistant Staphylococcus aureus / classification; Methicillin-Resistant Staphylococcus aureus / genetics; Methicillin-Resistant Staphylococcus aureus / isolation & purification; Molecular Typing; Nasal Mucosa / microbiology; Penicillin-Binding Proteins; Polymerase Chain Reaction; Rectum / microbiology; Rodent Diseases / microbiology; Rodent Diseases / transmission; Staphylococcal Infections / microbiology; Staphylococcal Infections / transmission; Staphylococcal Infections / veterinary; Zoonoses / microbiology; Zoonoses / transmission
TL;DR: It is newly document that the transmission of MRSA between human and hamster is possible and methicillin-resistant Staphylococcus aureus between humans and animals is increasingly recognized. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2011 article

The Impact of Omic Technologies on the Study of Food Microbes

ANNUAL REVIEW OF FOOD SCIENCE AND TECHNOLOGY, VOL 2, Vol. 2, pp. 353–371.

author keywords: sequencing; genome; probiotic; pathogen; microbiome; transcriptome
MeSH headings : Animals; Bioengineering; Food Microbiology / methods; Foodborne Diseases / prevention & control; Gene Expression Profiling; Genomics / methods; Gram-Negative Bacteria / classification; Gram-Negative Bacteria / genetics; Gram-Negative Bacteria / isolation & purification; Gram-Negative Bacteria / metabolism; Gram-Positive Bacteria / classification; Gram-Positive Bacteria / genetics; Gram-Positive Bacteria / isolation & purification; Gram-Positive Bacteria / metabolism; High-Throughput Nucleotide Sequencing; Humans; Metagenomics / methods; Molecular Typing; Proteomics / methods; Transcriptome
TL;DR: This review outlines advances in omic technologies and how these have impacted food microbiology through providing examples of recently published landmark work. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2011 journal article

The Human Mitochondrial tRNA(Met): Structure/Function Relationship of a Unique Modification in the Decoding of Unconventional Codons

JOURNAL OF MOLECULAR BIOLOGY, 406(2), 257–274.

By: Y. Bilbille n, E. Gustilo n, K. Harris n, C. Jones*, H. Lusic n, R. Kaiser*, M. Delano, L. Spremulli*, A. Deiters n, P. Agris n

author keywords: 5-formylcytidine; NMR structure; mitochondrial translation; codon expansion; near cognate decoding
MeSH headings : Animals; Anticodon / chemistry; Anticodon / genetics; Base Pairing; Base Sequence; Cattle; Cytidine / analogs & derivatives; Cytidine / chemistry; Cytidine / genetics; Escherichia coli / genetics; Humans; Mitochondria / chemistry; Mitochondria / genetics; Molecular Sequence Data; RNA, Transfer, Met / chemistry; RNA, Transfer, Met / genetics; Ribosomes / chemistry; Ribosomes / genetics; Structure-Activity Relationship
TL;DR: The physicochemical properties of this one modification, f(5)C(34), expand codon recognition from the traditional AUG to the non-traditional, synonymous codons AUU and AUC as well as AUA, in the reassignment of universal codons in the mitochondria. (via Semantic Scholar)
Source: Web Of Science
Added: August 6, 2018

2011 journal article

The Effects of Weak Genetic Perturbations on the Transcriptome of the Wing Imaginal Disc and Its Association With Wing Shape in Drosophila melanogaster

GENETICS, 187(4), 1171–U314.

By: I. Dworkin n, J. Anderson n, Y. Idaghdour n, E. Parker n, E. Stone n & G. Gibson n

MeSH headings : Animals; Drosophila Proteins / genetics; Drosophila Proteins / metabolism; Drosophila melanogaster / genetics; Drosophila melanogaster / growth & development; Gene Expression Profiling; Gene Expression Regulation, Developmental; Genes, Insect; Genetic Variation; Genome, Insect; Genotype; Heterozygote; Linear Models; Multigene Family; Mutation; Phenotype; Transcriptional Activation; Wings, Animal / growth & development
TL;DR: Weak mutational perturbations in genes affecting wing development in Drosophila melanogaster that influence wing shape relative to a co-isogenic wild type are used to examine overall patterns of covariation between phenotypic variables of interest and underlying aspects of gene activity. (via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action (Web of Science)
15. Life on Land (Web of Science)
Source: Web Of Science
Added: August 6, 2018

2011 journal article

Synthesis and Photophysical Characterization of Stable Indium Bacteriochlorins

INORGANIC CHEMISTRY, 50(10), 4607–4618.

By: M. Krayer n, E. Yang*, H. Kim n, H. Kee*, R. Deans n, C. Sluder n, J. Diers*, C. Kirmaier* ...

MeSH headings : Acids / chemistry; Bacteria; Bacteriochlorophylls / chemistry; Bacteriochlorophylls / metabolism; Catalysis; Coordination Complexes / chemical synthesis; Coordination Complexes / metabolism; Electrons; Fluorescence; Indium / chemistry; Indium / metabolism; Kinetics; Light; Magnetic Resonance Spectroscopy; Molecular Conformation / radiation effects; Molecular Mimicry; Photochemistry / methods; Photochemotherapy; Porphyrins / chemical synthesis; Porphyrins / metabolism; Pyrroles / chemistry; Quantum Theory
TL;DR: The trends in optical properties of the indium bacteriochlorins versus free base analogues, and the effects of 5-OMe versus 5-H substituents, correlate well with frontier molecular-orbital energies and energy gaps derived from density functional theory calculations. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

Starch Self-Processing in Transgenic Sweet Potato Roots Expressing a Hyperthermophilic alpha-Amylase

BIOTECHNOLOGY PROGRESS, 27(2), 351–359.

author keywords: hyperthermophilic enzymes; starch conversion; transgenic plants; sweet potato; biofuels
MeSH headings : Crops, Agricultural / genetics; Hot Temperature; Ipomoea batatas / genetics; Ipomoea batatas / metabolism; Plant Roots / metabolism; Plants, Genetically Modified / enzymology; Plants, Genetically Modified / metabolism; Southeastern United States; Starch / metabolism; Thermotoga maritima / enzymology; alpha-Amylases / genetics; alpha-Amylases / physiology
TL;DR: The results presented here demonstrate that engineering plants with hyperthermophilic glycoside hydrolases can facilitate cost effective starch conversion to fermentable sugars and the use of sweet potato as an alternative near‐term energy crop should be considered. (via Semantic Scholar)
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

Spatial variability of the stable isotope (δ15N) composition in two freshwater bivalves (Corbicula fluminea and Elliptio complanata)

Journal of Freshwater Ecology, 26(1), 19–24.

By: J. Bucci n, J. Levine n & W. Showers n

author keywords: stable nitrogen isotopes; freshwater bivalves; biomonitors
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2011 journal article

Smooth density estimation with moment constraints using mixture distributions

JOURNAL OF NONPARAMETRIC STATISTICS, 23(2), 513–531.

By: A. Eloyan n & S. Ghosh n

Contributors: A. Eloyan n & S. Ghosh n

author keywords: bandwidth selection; EM-algorithm; estimation of mixture complexity; kernel density estimation; Kullback-Leibler divergence
UN Sustainable Development Goal Categories
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

Single-Component Polymer Composites

MACROMOLECULES, 44(10), 3856–3861.

UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2011 journal article

Scattering functions of Platonic solids

JOURNAL OF APPLIED CRYSTALLOGRAPHY, 44, 545–557.

By: X. Li*, C. Shew*, L. He*, F. Meilleur n, D. Myles*, E. Liu*, Y. Zhang*, G. Smith* ...

UN Sustainable Development Goal Categories
Sources: Web Of Science, ORCID
Added: August 6, 2018

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