2023 article

A pile of pipelines: An overview of the bioinformatics software for metabarcoding data analyses

Hakimzadeh, A., Abdala Asbun, A., Albanese, D., Bernard, M., Buchner, D., Callahan, B., … Anslan, S. (2023, August 7). MOLECULAR ECOLOGY RESOURCES.

By: A. Hakimzadeh *, A. Abdala Asbun *, D. Albanese *, M. Bernard *, D. Buchner *, B. Callahan n , J. Caporaso *, E. Curd * ...

author keywords: amplicon data analysis; bioinformatics; environmental DNA; metabarcoding; pipeline; review
TL;DR: This review outlines the input data requirements, supported operating systems and particular attributes of thirty-two amplicon processing pipelines of metabarcoding data analysis tools and pipelines with the goal of helping users to select a pipeline for their metabarcode projects. (via Semantic Scholar)
UN Sustainable Development Goal Categories
13. Climate Action (Web of Science)
14. Life Below Water (Web of Science)
Source: Web Of Science
Added: August 28, 2023

Abstract