@article{allona_kirst_boerjan_strauss_sederoff_2019, title={Editorial: Forest Genomics and Biotechnology}, volume={10}, ISSN={["1664-462X"]}, DOI={10.3389/fpls.2019.01187}, abstractNote={1 Centro de Biotecnología y Genómica de Plantas (CBGP, UPM-INIA), Universidad Politécnica de Madrid (UPM) Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Campus de Montegancedo, Pozuelo de Alarcón, Madrid, Spain, 2 Departamento de Biotecnología-Biología Vegetal, Escuela Técnica Superior de Ingeniería Agronómica, Alimentaria y de Biosistemas, Universidad Politécnica de Madrid (UPM), Madrid, Spain, 3 School of Forest Resources and Conservation, University of Florida, Gainesville, FL, United States, 4 Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium, 5 Center for Plant Systems Biology, VIB, Ghent, Belgium, 6 Department of Forest Ecosystems and Society, Oregon State University, Corvallis, OR, United States, 7 Department of Forestry and Environmental Resources, North Carolina State University, Raleigh, NC, United States}, journal={FRONTIERS IN PLANT SCIENCE}, author={Allona, Isabel and Kirst, Matias and Boerjan, Wout and Strauss, Steven and Sederoff, Ronald}, year={2019}, month={Oct} } @article{zhang_sederoff_allona_2000, title={Differential expression of genes encoding cell wall proteins in vascular tissues from vertical and bent loblolly pine trees}, volume={20}, number={7}, journal={Tree Physiology}, author={Zhang, Y. and Sederoff, R. R. and Allona, I.}, year={2000}, pages={457–466} } @article{allona_quinn_shoop_swope_st cyr_carlis_riedl_retzel_campbell_sederoff_et al._1998, title={Analysis of xylem formation in pine by cDNA sequencing}, volume={95}, ISSN={["0027-8424"]}, DOI={10.1073/pnas.95.16.9693}, abstractNote={ Secondary xylem (wood) formation is likely to involve some genes expressed rarely or not at all in herbaceous plants. Moreover, environmental and developmental stimuli influence secondary xylem differentiation, producing morphological and chemical changes in wood. To increase our understanding of xylem formation, and to provide material for comparative analysis of gymnosperm and angiosperm sequences, ESTs were obtained from immature xylem of loblolly pine ( Pinus taeda L.). A total of 1,097 single-pass sequences were obtained from 5′ ends of cDNAs made from gravistimulated tissue from bent trees. Cluster analysis detected 107 groups of similar sequences, ranging in size from 2 to 20 sequences. A total of 361 sequences fell into these groups, whereas 736 sequences were unique. About 55% of the pine EST sequences show similarity to previously described sequences in public databases. About 10% of the recognized genes encode factors involved in cell wall formation. Sequences similar to cell wall proteins, most known lignin biosynthetic enzymes, and several enzymes of carbohydrate metabolism were found. A number of putative regulatory proteins also are represented. Expression patterns of several of these genes were studied in various tissues and organs of pine. Sequencing novel genes expressed during xylem formation will provide a powerful means of identifying mechanisms controlling this important differentiation pathway. }, number={16}, journal={PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA}, author={Allona, I and Quinn, M and Shoop, E and Swope, K and St Cyr, S and Carlis, J and Riedl, J and Retzel, E and Campbell, MM and Sederoff, R and et al.}, year={1998}, month={Aug}, pages={9693–9698} }