Chia-Hui Hu
Works (7)
Updated: July 5th, 2023 15:52
2015 journal article
Mitochondrial genome sequences reveal evolutionary relationships of the Phytophthora 1c clade species
Current Genetics, 61(4), 567–577.
Contributors: E. Lassiter n, C. Russ *, C. Nusbaum *, Q. Zeng *, A. Saville n, R. Olarte n, I. Carbone n , n
author keywords: Phytophthora 1 c clade; Mitochondria; Late blight; Phylogenetics
MeSH headings : Biological Evolution; Chimera / microbiology; Colombia; DNA, Mitochondrial / genetics; Ecuador; Genome, Mitochondrial; Solanum lycopersicum / microbiology; Mitochondria / genetics; Peru; Phylogeny; Phylogeography; Phytophthora / classification; Phytophthora / genetics; Phytophthora infestans / classification; Phytophthora infestans / genetics; Plant Diseases / microbiology; Sequence Analysis, DNA; Solanum tuberosum / microbiology
TL;DR:
The ancestral state of the P. andina Ic lineage in the tree and its occurrence only in the Andean regions of Ecuador, Colombia and Peru suggests that the origin of this species hybrid in nature may occur there.
(via Semantic Scholar)
open access via europepmc.org (repository)
UN Sustainable Development Goal Categories
15. Life on Land
(OpenAlex)
Sources: Web Of Science, ORCID, NC State University Libraries, Crossref
Added: August 6, 2018
2012 journal article
Evidence for presence of the founder Ia mtDNA haplotype of Phytophthora infestans in 19th century potato tubers from the Rothamsted archives
PLANT PATHOLOGY, 62(3), 492–500.
Contributors: J. Ristaino* , * & B. Fitt *
author keywords: late blight; oomycetes; Phytophthora infestans; potato famine
TL;DR:
The founder Ia mtDNA haplotype survived in potato tubers after 1846 and was present over 30 years later in the UK, thus providing the earliest evidence of the presence of the founder IA mt DNA haplotype of P. infestans in Potato tubers in England.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(OpenAlex)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018
2012 journal article
Recent Genotypes of Phytophthora infestans in the Eastern United States Reveal Clonal Populations and Reappearance of Mefenoxam Sensitivity
PLANT DISEASE, 96(9), 1323–1330.
Contributors: n, F. Perez*, R. Donahoo*, A. McLeod *, K. Myers*, K. Ivors n, G. Secor *, P. Roberts
TL;DR:
Whereas most individuals of US-8 and US-20 were resistant to mefenoxam, US-21 appeared to be intermediately sensitive, and isolates ofUS-22, US,23, andUS-24 were largely sensitive to me Fenoxam; these latter three genotypes appear to have been derived from a common ancestor.
(via Semantic Scholar)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018
2011 journal article
DNA barcoding of oomycetes with cytochrome c oxidase subunit I and internal transcribed spacer
Molecular Ecology Resources, 11(6), 1002–1011.
Source: NC State University Libraries
Added: August 6, 2018
2010 journal article
Genetic Structure of Phytophthora infestans Populations in China Indicates Multiple Migration Events
PHYTOPATHOLOGY, 100(10), 997–1006.
Contributors: L. Guo *, X. Zhu n, n & J. Ristaino*
author keywords: genetic diversity; late blight; mtDNA haplotypes
MeSH headings : China; Genetic Variation; Phylogeny; Phylogeography; Phytophthora infestans / genetics; Phytophthora infestans / physiology; Plant Diseases / microbiology; Polymorphism, Restriction Fragment Length; Solanum tuberosum / microbiology; Time Factors
TL;DR:
MtDNA haplotype evidence and RFLP data suggest multiple migrations of the pathogen into China after the initial introduction of the Ia haplotype in the 1930s.
(via Semantic Scholar)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018
2009 journal article
Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans
NATURE, 461(7262), 393–398.
Contributors: B. Haas *, S. Kamoun *, M. Zody *, R. Jiang *, R. Handsaker *, L. Cano *, M. Grabherr *, C. Kodira*
MeSH headings : Algal Proteins / genetics; DNA Transposable Elements / genetics; DNA, Intergenic / genetics; Evolution, Molecular; Genome / genetics; Host-Pathogen Interactions / genetics; Humans; Ireland; Molecular Sequence Data; Necrosis; Phenotype; Phytophthora infestans / genetics; Phytophthora infestans / pathogenicity; Plant Diseases / immunology; Plant Diseases / microbiology; Solanum tuberosum / immunology; Solanum tuberosum / microbiology; Starvation
TL;DR:
The sequence of the P. infestans genome is reported, which at ∼240 megabases (Mb) is by far the largest and most complex genome sequenced so far in the chromalveolates and probably plays a crucial part in the rapid adaptability of the pathogen to host plants and underpins its evolutionary potential.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger
(Web of Science; OpenAlex)
13. Climate Action
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2008 journal article
Phylogenetic relationships of Phytophthora andina, a new species from the highlands of Ecuador that is closely related to the Irish potato famine pathogen Phytophthora infestans
MYCOLOGIA, 100(4), 590–602.
Contributors: L. Gómez-Alpizar *, n, R. Oliva *, G. Forbes * & J. Ristaino n
author keywords: Oomycetes; Phytophthora; potato; Stramenopiles
MeSH headings : DNA, Mitochondrial / genetics; Ecuador; Electron Transport Complex IV / genetics; Fungal Proteins / genetics; Molecular Sequence Data; Phylogeny; Phytophthora / classification; Phytophthora / genetics; Phytophthora / isolation & purification; Plant Diseases / microbiology; Polymorphism, Restriction Fragment Length; Solanum / microbiology; ras Proteins / genetics
TL;DR:
Phylogenetic relationships of Phytophthora infestans sensu lato in the Andean highlands of South America were examined and sequences of the cytochrome oxidase I (cox I) gene and intron 1 of ras gene suggested that P. andina might have arisen via hybridization between P.infestans and P. mirabilis.
(via Semantic Scholar)
Sources: Web Of Science, ORCID, NC State University Libraries
Added: August 6, 2018
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