Works (11)

Updated: July 5th, 2023 15:50

2020 journal article

Inhalation of lung spheroid cell secretome and exosomes promotes lung repair in pulmonary fibrosis

NATURE COMMUNICATIONS, 11(1).

By: P. Dinh n, D. Paudel n, H. Brochu n, K. Popowski n, M. Gracieux n, J. Cores n, K. Huang n, M. Hensley n ...

co-author countries: United States of America 🇺🇸
MeSH headings : Administration, Inhalation; Alveolar Epithelial Cells / drug effects; Alveolar Epithelial Cells / metabolism; Alveolar Epithelial Cells / pathology; Animals; Apoptosis / drug effects; Bleomycin / toxicity; Cell Proliferation; Disease Models, Animal; Exosomes / metabolism; Exosomes / transplantation; Humans; Idiopathic Pulmonary Fibrosis / chemically induced; Idiopathic Pulmonary Fibrosis / metabolism; Idiopathic Pulmonary Fibrosis / pathology; Idiopathic Pulmonary Fibrosis / therapy; Lung / cytology; Lung / metabolism; Lung Injury / chemically induced; Lung Injury / metabolism; Lung Injury / pathology; Lung Injury / therapy; Mesenchymal Stem Cells / metabolism; Mice; Myofibroblasts / cytology; Proteomics; Silicon Dioxide / toxicity; Spheroids, Cellular / metabolism
Sources: Web Of Science, ORCID
Added: March 23, 2020

2019 journal article

Proteomic method to extract, concentrate, digest and enrich peptides from fossils with coloured (humic) substances for mass spectrometry analyses

ROYAL SOCIETY OPEN SCIENCE, 6(8).

By: E. Schroeter n, K. Blackburn n, M. Goshe n & M. Schweitzer n

co-author countries: United States of America 🇺🇸
author keywords: palaeoproteomics; fossils; humic substances; protein; mass spectrometry; moa
Sources: Web Of Science, ORCID
Added: September 23, 2019

2017 journal article

Autophosphorylation-based Calcium (Ca2(+)) Sensitivity Priming and Ca2(+)/Calmodulin Inhibition of Arabidopsis thaliana Ca2(+)-dependent Protein Kinase 28 (CPK28)

JOURNAL OF BIOLOGICAL CHEMISTRY, 292(10), 3988–4002.

By: K. Bender*, R. Blackburn n, J. Monaghan*, P. Derbyshire*, F. Menke*, C. Zipfel*, M. Goshe n, R. Zielinski*, S. Huber*

co-author countries: United Kingdom of Great Britain and Northern Ireland 🇬🇧 United States of America 🇺🇸
MeSH headings : Amino Acid Sequence; Arabidopsis / drug effects; Arabidopsis / growth & development; Arabidopsis / metabolism; Arabidopsis Proteins / metabolism; Calcium / pharmacology; Calmodulin / pharmacology; Gene Expression Regulation, Plant / drug effects; Kinetics; Phosphorylation / drug effects; Protein Binding; Protein Conformation; Protein Interaction Domains and Motifs; Protein Kinases / chemistry; Protein Kinases / metabolism; Sequence Homology, Amino Acid
Source: Web Of Science
Added: August 6, 2018

2017 journal article

Quantitative Proteomic Analysis of Human Airway Cilia Identifies Previously Uncharacterized Proteins of High Abundance

JOURNAL OF PROTEOME RESEARCH, 16(4), 1579–1592.

By: K. Blackburn n, X. Bustamante-Marin*, W. Yin*, M. Goshe n & L. Ostrowski*

co-author countries: United States of America 🇺🇸
author keywords: cilia; axoneme; mass spectrometry; proteomics; airway; dynein; tubulin; radial spoke
MeSH headings : Axoneme / genetics; Cilia / genetics; Dyneins / genetics; Dyneins / isolation & purification; Gene Expression Regulation; Humans; Proteins / genetics; Proteins / isolation & purification; Proteome / genetics; Proteomics; Tubulin / genetics; Tubulin / isolation & purification
Source: Web Of Science
Added: August 6, 2018

2015 journal article

Development of a tandem affinity phosphoproteomic method with motif selectivity and its application in analysis of signal transduction networks

JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES, 988, 166–174.

By: L. Herring n, K. Grant*, K. Blackburn n, J. Haugh n & M. Goshe n

co-author countries: United States of America 🇺🇸
author keywords: Phosphopeptide enrichment; Liquid chromatography; Mass spectrometry; Motif analysis; Pathway analysis
MeSH headings : Amino Acid Sequence; Chromatography, Liquid / methods; Molecular Sequence Data; Phosphopeptides / analysis; Phosphopeptides / chemistry; Proteomics / methods; Signal Transduction / physiology; Tandem Mass Spectrometry / methods
Sources: Web Of Science, ORCID
Added: August 6, 2018

2013 journal article

Lengthening the Intersubunit Linker of Procaspase 3 Leads to Constitutive Activation

BIOCHEMISTRY, 52(36), 6219–6231.

By: S. MacKenzie n, J. Schipper n, E. England n, M. Thomas n, K. Blackburn n, P. Swartz n, A. Clark n

co-author countries: United States of America 🇺🇸
MeSH headings : Apoptosis / physiology; Caspase 3 / chemistry; Caspase 3 / genetics; Caspase 3 / metabolism; Caspase Inhibitors / pharmacology; Catalytic Domain; Enzyme Activation; Enzyme Precursors / chemistry; Models, Chemical; Models, Molecular; Molecular Dynamics Simulation; Protein Conformation; Protein Multimerization
Source: Web Of Science
Added: August 6, 2018

2013 journal article

Reversible cyclic peptide libraries for the discovery of affinity ligands

Analytical Chemistry, 85(19), 9229–9237.

By: S. Menegatti n, K. Ward n, A. Naik n, W. Kish n, R. Blackburn n & R. Carbonell n

co-author countries: United States of America 🇺🇸
MeSH headings : Ligands; Molecular Structure; Peptide Library; Peptides, Cyclic / analysis; Tandem Mass Spectrometry
Sources: Web Of Science, ORCID
Added: August 6, 2018

2012 journal article

Proteomic and Phosphoproteomic Analysis of Chicken Embryo Fibroblasts Infected with Cell Culture-Attenuated and Vaccine Strains of Marek's Disease Virus

JOURNAL OF PROTEOME RESEARCH, 11(12), 5663–5677.

By: K. Chien n, K. Blackburn n, H. Liu n & M. Goshe n

co-author countries: United States of America 🇺🇸
author keywords: proteomics; phosphoproteomics; liquid chromatography; mass spectrometry; Marek's Disease Virus; phosphorylation
MeSH headings : Amino Acid Sequence; Animals; Cells, Cultured; Chick Embryo; Chromatography, Affinity / methods; Eukaryotic Initiation Factor-4E / metabolism; Fibroblasts / metabolism; Fibroblasts / virology; Herpesvirus 2, Gallid / classification; Herpesvirus 2, Gallid / pathogenicity; Marek Disease; Mass Spectrometry / methods; Molecular Sequence Data; Multiprotein Complexes / analysis; Multiprotein Complexes / metabolism; Peptide Chain Initiation, Translational; Phosphopeptides / analysis; Phosphopeptides / metabolism; Phosphoproteins / analysis; Phosphoproteins / metabolism; Phosphorylation; Proteome / analysis; Proteome / metabolism; Proteomics / methods; Transcription, Genetic; Viral Plaque Assay
Source: Web Of Science
Added: August 6, 2018

2010 journal article

Data-independent liquid chromatography/mass spectrometry (LC/MSE) detection and quantification of the secreted Apium graveolens pathogen defense protein mannitol dehydrogenase

Rapid Communications in Mass Spectrometry, 24(7), 1009–1016.

By: K. Blackburn n, F. Cheng n, J. Williamson n & M. Goshe n

co-author countries: United States of America 🇺🇸
MeSH headings : Amino Acid Sequence; Apium / drug effects; Apium / enzymology; Cell Culture Techniques; Chromatography, Liquid / methods; Electrophoresis, Polyacrylamide Gel; Immunoblotting; Mannitol Dehydrogenases / chemistry; Mannitol Dehydrogenases / genetics; Mannitol Dehydrogenases / metabolism; Molecular Sequence Data; Proteome / analysis; Proteome / drug effects; Proteome / metabolism; Salicylic Acid / pharmacology; Tandem Mass Spectrometry / methods
Source: NC State University Libraries
Added: August 6, 2018

2010 journal article

Improving Protein and Proteome Coverage through Data-Independent Multiplexed Peptide Fragmentation

JOURNAL OF PROTEOME RESEARCH, 9(7), 3621–3637.

By: K. Blackburn n, F. Mbeunkui n, S. Mitra n, T. Mentzel n & M. Goshe n

co-author countries: Switzerland 🇨🇭 United States of America 🇺🇸
author keywords: Proteomics; mass spectrometry; protein characterization; data-independent acquisition (DIA); data-dependent acquisition (DDA); protein identification; LC/MSE
MeSH headings : Amino Acid Sequence; Animals; Arabidopsis Proteins / chemistry; Arabidopsis Proteins / metabolism; Artifacts; Cattle; Chromatography, Liquid / methods; Ions / chemistry; Solanum lycopersicum; Mass Spectrometry / methods; Molecular Sequence Data; Peptide Fragments / chemistry; Peptide Fragments / metabolism; Plant Leaves; Plant Proteins / chemistry; Plant Proteins / metabolism; Protein Kinases / chemistry; Protein Kinases / metabolism; Proteomics / methods; Serum Albumin, Bovine / chemistry; Serum Albumin, Bovine / metabolism; Trypsin / metabolism
Source: Web Of Science
Added: August 6, 2018

2009 journal article

Mass Spectrometry Bioinformatics: Tools for Navigating the Proteomics Landscape

CURRENT ANALYTICAL CHEMISTRY, 5(2), 131–143.

By: K. Blackburn* & M. Goshe

author keywords: Mass spectrometry; Peptide identification; Product ion spectrum; Database searching; Proteomics; Bioinformatics
Source: Web Of Science
Added: August 6, 2018

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