Dalia I. Juzumiene

Works (3)

Updated: July 5th, 2023 16:02

2001 article

Arrangement of the central pseudoknot region of 16S rRNA in the 30S ribosomal subunit determined by site-directed 4-thiouridine crosslinking

JUZUMIENE, D. A. L. I. A. I., & WOLLENZIEN, P. A. U. L. (2001, January 1). RNA.

By: D. Juzumiene n & P. Wollenzien n

author keywords: 16S rRNA three-dimensional structure; intramolecular RNA-RNA crosslinks; mRNA decoding region
MeSH headings : Base Sequence; Cross-Linking Reagents; DNA Ligases / metabolism; DNA, Single-Stranded / chemistry; Escherichia coli / genetics; Escherichia coli / virology; Models, Molecular; Molecular Sequence Data; Nucleic Acid Conformation; Oligoribonucleotides / chemical synthesis; Oligoribonucleotides / chemistry; RNA, Ribosomal, 16S / chemistry; RNA, Ribosomal, 16S / drug effects; Reverse Transcriptase Polymerase Chain Reaction; Ribosomes / chemistry; Ribosomes / drug effects; Ribosomes / ultrastructure; Thiouridine / pharmacology; Transcription, Genetic
topics (OpenAlex): RNA and protein synthesis mechanisms; RNA modifications and cancer; RNA Research and Splicing
TL;DR: Results indicate that part of the central pseudoknot is in close contact with the decoding region, with helix 27 in the 885-912 interval and with part of domain III RNA. (via Semantic Scholar)
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2001 article

Short-Range RNA-RNA Crosslinking Methods to Determine rRNA Structure and Interactions

Juzumiene, D., Shapkina, T., Kirillov, S., & Wollenzien, P. (2001, November 1). Methods.

By: D. Juzumiene*, T. Shapkina n, S. Kirillov n & P. Wollenzien n

MeSH headings : Cross-Linking Reagents / pharmacology; DNA Ligases / chemistry; DNA Ligases / isolation & purification; DNA, Complementary / chemistry; Electrophoresis, Polyacrylamide Gel; Models, Molecular; Nucleic Acid Conformation; RNA / chemistry; RNA / ultrastructure; RNA, Messenger / chemistry; RNA, Ribosomal / chemistry; RNA, Ribosomal, 16S / chemistry; RNA, Transfer / chemistry; Ultraviolet Rays
topics (OpenAlex): RNA and protein synthesis mechanisms; RNA modifications and cancer; RNA Research and Splicing
TL;DR: Details of procedures to analyze RNA-RNA crosslinks made by far-UV irradiation (< 300 nm) or made by irradiation with near-UV light on RNA containing photosensitive nucleotides, in the present case containing 4-thiouridine are described. (via Semantic Scholar)
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2000 article

Organization of the 16S rRNA around its 5′ terminus determined by photochemical crosslinking in the 30S ribosomal subunit

JUZUMIENE, D. A. L. I. A. I., & WOLLENZIEN, P. A. U. L. (2000, January 1). RNA.

By: D. Juzumiene n & P. Wollenzien n

author keywords: 16S rRNA three-dimensional structure; intramolecular RNA-RNA cross-links; reverse transcription arrest assay
MeSH headings : Azides; Base Sequence; Cross-Linking Reagents; Molecular Sequence Data; Nucleic Acid Conformation; RNA, Ribosomal, 16S / chemistry; RNA, Transfer / chemistry; RNA, Transfer / radiation effects; Ultraviolet Rays
topics (OpenAlex): RNA and protein synthesis mechanisms; RNA modifications and cancer; Advanced biosensing and bioanalysis techniques
TL;DR: Differences in the pattern and efficiency of crosslinking for the different constructs allow distance estimates for the crosslinked sites from nucleotide G9 to provide constraints for the arrangement of the RNA elements in the 30S subunit. (via Semantic Scholar)
UN Sustainable Development Goals Color Wheel
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

Citation Index includes data from a number of different sources. If you have questions about the sources of data in the Citation Index or need a set of data which is free to re-distribute, please contact us.

Certain data included herein are derived from the Web of Science© and InCites© (2026) of Clarivate Analytics. All rights reserved. You may not copy or re-distribute this material in whole or in part without the prior written consent of Clarivate Analytics.