D. M. Nielsen

Works (20)

Updated: July 5th, 2023 16:03
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2013 journal article

A method for detecting hidden additivity in two-factor unreplicated experiments

Computational Statistics & Data Analysis, 67, 95–104.

By: C. Franck *, D. Nielsen n  & J. Osborne n

author keywords: Interaction effects; Latent variables; Non-additivity
Sources: Web Of Science, Crossref, ORCID
Added: August 6, 2018

2011 journal article

Gene Expression profile and response to maize kernels by Aspergillus flavus

Phytopathology, 101(7), 797–804.

By: B. Reese, G. Payne*, D. Nielsen*  & C. Woloshuk

MeSH headings : 6-Phytase / genetics; 6-Phytase / metabolism; Aflatoxins / biosynthesis; Aspergillus flavus / enzymology; Aspergillus flavus / genetics; Aspergillus flavus / growth & development; Aspergillus flavus / pathogenicity; Down-Regulation; Gene Expression Profiling / methods; Gene Expression Regulation, Fungal / genetics; Oligonucleotide Array Sequence Analysis / methods; Reverse Transcriptase Polymerase Chain Reaction; Seeds / microbiology; Sequence Deletion; Transformation, Genetic; Up-Regulation; Virulence; Zea mays / growth & development; Zea mays / microbiology
Sources: Web Of Science, ORCID
Added: August 6, 2018

2011 journal article

Genome-wide linkage study of atopic dermatitis in West Highland White Terriers

BMC Genetics, 12.

By: C. Salzmann, T. Olivry, D. Nielsen, J. Paps, T. Harris & N. Olby 

Source: NC State University Libraries
Added: August 6, 2018

2010 journal article

Genomic hotspots for adaptation: The population genetics of Mullerian mimicry in Heliconius erato

PLoS Genetics, 6(4).

By: B. Counterman, F. Araujo-Perez, H. Hines, S. Baxter, C. Morrison, D. Lindstrom, R. Papa, L. Ferguson ...

Source: NC State University Libraries
Added: August 6, 2018

2008 journal article

Does strong linkage disequilibrium guarantee redundant association results?

Genetic Epidemiology, 32(6), 546–552.

By: D. Nielsen n , S. Suchindran n & C. Smith n

author keywords: linkage disequilibrium; association mapping; negative correlation; case control; transmission disequilibrium
MeSH headings : Computer Simulation; Gene Frequency; Genetic Markers; Genome, Human; Haplotypes; Humans; Linkage Disequilibrium; Models, Genetic; Models, Statistical; Phenotype; Polymorphism, Single Nucleotide; Quantitative Trait, Heritable
Sources: Web Of Science, Crossref, ORCID
Added: August 6, 2018

2008 journal article

The effect of temperature on Natural Antisense Transcript (NAT) expression in Aspergillus flavus

Current Genetics, 54(5), 241–269.

By: C. Smith*, D. Robertson n, B. Yates *, D. Nielsen n , D. Brown n, R. Dean n , G. Payne n

author keywords: Aspergillus flavus; Natural antisense transcripts (NATs); Temperature; Gene expression
MeSH headings : Aspergillus flavus / genetics; Aspergillus flavus / metabolism; Expressed Sequence Tags; Fungal Proteins / genetics; Fungal Proteins / metabolism; Gene Expression Regulation, Fungal; Genome, Fungal; RNA Precursors / metabolism; RNA, Antisense / metabolism; Temperature; Transcription, Genetic / genetics
Sources: Web Of Science, Crossref, ORCID
Added: August 6, 2018

2007 journal article

Comprehensive Transcriptome Profiling in Tomato Reveals a Role for Glycosyltransferase in Mi-Mediated Nematode Resistance

Plant Physiology, 144(2), 1079–1092.

By: J. Schaff n, D. Nielsen n , C. Smith n, E. Scholl n & D. Bird n 

Contriutors: J. Schaff n, D. Nielsen n , C. Smith n, E. Scholl n & D. Bird n

MeSH headings : Animals; Feeding Behavior / physiology; Gene Expression; Gene Expression Profiling; Gene Expression Regulation, Plant; Gene Silencing; Genomics; Glycosyltransferases / metabolism; Host-Parasite Interactions / physiology; Solanum lycopersicum / enzymology; Solanum lycopersicum / genetics; Solanum lycopersicum / parasitology; Oligonucleotide Array Sequence Analysis; Plant Roots / enzymology; Plant Roots / metabolism; Plant Roots / parasitology; Reproduction / physiology; Tylenchoidea / physiology
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2007 journal article

Elucidation of veA-dependent genes associated with aflatoxin and sclerotial production in Aspergillus flavus by functional genomics

Applied Microbiology and Biotechnology, 76(5), 1107–1118.

By: J. Cary *, G. OBrian n, D. Nielsen n , W. Nierman*, P. Harris-Coward*, J. Yu *, D. Bhatnagar *, T. Cleveland*, G. Payne n, A. Calvo *

author keywords: Aspergillus flavus; veA; aflatoxin; sclerotia; microarray
MeSH headings : Aflatoxins / biosynthesis; Anthraquinones / metabolism; Aspergillus flavus / genetics; Aspergillus flavus / growth & development; Aspergillus flavus / metabolism; Fungal Proteins / genetics; Fungal Proteins / metabolism; Gene Expression Profiling; Gene Expression Regulation, Fungal; Gene Library; Genomics; Oligonucleotide Array Sequence Analysis / methods
Sources: Web Of Science, Crossref, ORCID
Added: August 6, 2018

2006 journal article

A unified mixed-model method for association mapping that accounts for multiple levels of relatedness

Nature Genetics, 38(2), 203–208.

By: J. Yu *, G. Pressoir *, W. Briggs*, I. Vroh Bi*, M. Yamasaki *, J. Doebley *, M. McMullen*, B. Gaut* ...

Contriutors: J. Yu *, G. Pressoir *, W. Briggs*, I. Bi*, M. Yamasaki *, J. Doebley *, M. McMullen*, B. Gaut* ...

MeSH headings : Gene Expression; Genetic Techniques; Genetic Variation; Heredity / genetics; Humans; Models, Genetic; Phenotype; Quantitative Trait, Heritable; Research Design; Zea mays / genetics
Sources: Web Of Science, ORCID, Crossref
Added: August 6, 2018

2005 journal article

Association of genetic polymorphisms with risk of renal injury after coronary bypass graft surgery

American Journal of Kidney Diseases, 45(3), 519–530.

By: M. Stafford-Smith*, M. Podgoreanu *, M. Swaminathan *, B. Phillips-Bute*, J. Mathew *, E. Hauser *, M. Winn*, C. Milano * ...

author keywords: acute renal failure (ARF); polymorphism; genetic; postoperative; intensive care; cardiopulmonary bypass (CPB); heart surgery; cardiac surgery; human; angiotensin-converting enzyme (ACE); associate study; candidate genes
MeSH headings : Acute Kidney Injury / blood; Acute Kidney Injury / epidemiology; Acute Kidney Injury / ethnology; Acute Kidney Injury / genetics; Black or African American / genetics; Aged; Alleles; Angiotensins / genetics; Apolipoproteins E / genetics; Cardiovascular Diseases / epidemiology; Cardiovascular Diseases / surgery; Coronary Artery Bypass; Creatinine / blood; Cytokines / genetics; DNA Mutational Analysis; Female; Follow-Up Studies; Genetic Predisposition to Disease; Humans; Male; Middle Aged; Nitric Oxide Synthase / genetics; Nitric Oxide Synthase Type III; North Carolina / epidemiology; Polymorphism, Genetic; Postoperative Complications / epidemiology; Prospective Studies; Pulmonary Disease, Chronic Obstructive / epidemiology; Receptor, Angiotensin, Type 1 / genetics; Risk; White People / genetics
Sources: Web Of Science, Crossref, ORCID
Added: August 6, 2018

2005 journal article

Genetic Polymorphisms and the Risk of Stroke After Cardiac Surgery

Stroke, 36(9), 1854–1858.

By: H. Grocott  n, W. White  n, R. Morris  n, M. Podgoreanu  n, J. Mathew  n, D. Nielsen n , D. Schwinn  n, M. Newman  n

author keywords: cardiac surgical procedures; C-reactive protein; interleukin-6; polymorphism; stroke
MeSH headings : Aged; Alleles; C-Reactive Protein / genetics; Cardiopulmonary Bypass; Female; Genetic Predisposition to Disease; Genetic Variation; Humans; Inflammation; Interleukin-6 / genetics; Male; Middle Aged; Models, Genetic; Multivariate Analysis; Mutation; Odds Ratio; Polymorphism, Genetic; Polymorphism, Single Nucleotide; Postoperative Complications; Risk; Sex Factors; Stroke / genetics; Thoracic Surgery
Sources: Web Of Science, Crossref, ORCID
Added: August 6, 2018

2005 journal article

Measures of human population structure show heterogeneity among genomic regions

Genome Research, 15(11), 1468–1476.

By: B. Weir*, L. Cardon, A. Anderson*, D. Nelson & W. Hill

MeSH headings : Chromosomes, Human / genetics; Ethnicity / genetics; Genetic Heterogeneity; Genetics, Population; Genome, Human / genetics; Genomics / methods; Haplotypes / genetics; Humans; Linkage Disequilibrium / genetics; Polymorphism, Single Nucleotide / genetics; United States
Sources: Web Of Science, Crossref
Added: August 6, 2018

2004 journal article

Effect of Two- and Three-Locus Linkage Disequilibrium on the Power to Detect Marker/Phenotype Associations

Genetics, 168(2), 1029–1040.

By: D. Nielsen n , M. Ehm*, D. Zaykin* & B. Weir n

MeSH headings : Case-Control Studies; Computational Biology / methods; Computational Biology / statistics & numerical data; Genetic Markers / genetics; Genetic Variation / genetics; Genotype; Haplotypes; Humans; Linkage Disequilibrium / genetics; Phenotype; Polymorphism, Genetic / genetics; Quantitative Trait, Heritable
Sources: Web Of Science, Crossref, ORCID
Added: August 6, 2018

2001 journal article

Applying Data Mining Techniques to the Mapping of Complex Disease Genes

Genetic Epidemiology, 21(S1), S435–S440.

By: W. Czika n, B. Weir n, S. Edwards  n, R. Thompson n, D. Nielsen n , J. Brocklebank n, C. Zinkus n, E. Martin *, K. Nobler

MeSH headings : Chromosome Mapping / statistics & numerical data; Data Collection / statistics & numerical data; Decision Trees; Gene Frequency; Genetic Markers / genetics; Genetic Predisposition to Disease / genetics; Genotype; Humans; Models, Genetic; Polymorphism, Single Nucleotide / genetics; Regression Analysis
Sources: NC State University Libraries, Crossref
Added: August 6, 2018

2001 journal article

Association Studies under General Disease Models

Theoretical Population Biology, 60(3), 253–263.

By: D. Nielsen n  & B. Weir n

MeSH headings : Alleles; Apolipoproteins E / genetics; Chromosome Mapping / methods; Cytochrome P-450 CYP2D6 / genetics; Genetic Markers; Genetic Predisposition to Disease; Genotype; Haplotypes; Humans; Linkage Disequilibrium; Models, Genetic; Phenotype
Sources: Web Of Science, Crossref, ORCID
Added: August 6, 2018

1999 journal article

A classical setting for associations between markers and loci affecting quantitative traits

Genetical Research, 74(3), 271–277.

By: D. Nielsen n  & B. Weir n

MeSH headings : Animals; Genetic Markers; Humans; Mathematical Computing; Models, Genetic; Quantitative Trait, Heritable
Sources: Web Of Science, Crossref, ORCID
Added: August 6, 2018

1999 journal article

Localization of the locus causing Spider Lamb Syndrome to the distal end of ovine Chromosome 6

Mammalian Genome, 10(1), 35–38.

By: N. Cockett*, T. Shay*, J. Beever*, D. Nielsen n , J. Albretsen*, M. Georges*, K. Peterson*, A. Stephens* ...

MeSH headings : Animal Diseases / genetics; Animals; Chromosome Mapping; Female; Genetic Linkage; Genetic Markers; Inbreeding; Male; Osteochondrodysplasias / genetics; Pedigree; Polymorphism, Single-Stranded Conformational; Protein-Tyrosine Kinases; Receptor, Fibroblast Growth Factor, Type 3; Receptors, Fibroblast Growth Factor / genetics; Sheep / genetics
Sources: Web Of Science, Crossref
Added: August 6, 2018

1999 journal article

Novel tests for marker-disease association using the collaborative study on the genetics of alcoholism data

Genetic Epidemiology, 17(Suppl.1), S265–270.

By: D. Nielsen & D. Zaykin

Source: NC State University Libraries
Added: August 6, 2018

1998 journal article

Detecting Marker-Disease Association by Testing for Hardy-Weinberg Disequilibrium at a Marker Locus

The American Journal of Human Genetics, 63(5), 1531–1540.

By: D. Nielsen n , M. Ehm* & B. Weir n

MeSH headings : Alleles; Genes, Recessive; Genetic Diseases, Inborn / genetics; Genetic Markers; Genetic Predisposition to Disease; Heterozygote; Humans; Linkage Disequilibrium; Models, Genetic; Models, Statistical
Sources: Web Of Science, Crossref, ORCID
Added: August 6, 2018

1987 book

Virginia's forest and wildlife resources: Present and future

Blacksburg: School of Forestry and Wildlife Resources, Virginia Polytechnic Institute & State University.

By: O. Hall, R. McElwee, L. H. W., N. F. M. & L. Nielsen

Source: NC State University Libraries
Added: August 6, 2018