Benjamin G. Bobay

The Solution Structures and Interaction of SinR and SinI: Elucidating the Mechanism of Action of the Master Regulator Switch for Biofilm Formation in Bacillus subtilis

Milton, M. E., Draughn, G. L., Bobay, B. G., Stowe, S. D., Olson, A. L., Feldmann, E. A., … Cavanagh, J. (2019, September 5). Journal of Molecular Biology.

Translating antibody-binding peptides into peptoid ligands with improved affinity and stability

Bordelon, T., Bobay, B., Murphy, A., Reese, H., Shanahan, C., Odeh, F., … Menegatti, S. (2019, May 30). Journal of Chromatography A, Vol. 1602, pp. 284–299.

Design, selection, and development of cyclic peptide ligands for human erythropoietin

Kish, W. S., Sachi, H., Naik, A. D., Roach, M. K., Bobay, B. G., Blackburn, R. K., … Carbonell, R. G. (2017, April 12). Journal of Chromatography A, Vol. 1500, pp. 105–120.

Structure of the Francisella response regulator QseB receiver domain, and characterization of QseB inhibition by antibiofilm 2‐aminoimidazole‐based compounds

Milton, M. E., Allen, C. L., Feldmann, E. A., Bobay, B. G., Jung, D. K., Stephens, M. D., … Cavanagh, J. (2017, July 29). Molecular Microbiology.

Human Norovirus Aptamer Exhibits High Degree of Target Conformation-Dependent Binding Similar to That of Receptors and Discriminates Particle Functionality

Moore, M. D., Bobay, B. G., Mertens, B., & Jaykus, L.-A. (2016, November 3). MSphere.

NMR-based structural analysis of threonylcarbamoyl-AMP synthase and Its substrate interactions

Journal of Biological Chemistry, 290(33), 20032–20043.

A DNA Mimic: The Structure and Mechanism of Action for the Anti-Repressor Protein AbbA

Tucker, A. T., Bobay, B. G., Banse, A. V., Olson, A. L., Soderblom, E. J., Moseley, M. A., … Cavanagh, J. (2014, February 15). Journal of Molecular Biology.

Structure and DNA-Binding Traits of the Transition State Regulator AbrB

Olson, A. L., Tucker, A. T., Bobay, B. G., Soderblom, E. J., Moseley, M. A., Thompson, R. J., & Cavanagh, J. (2014, October 9). Structure.

Chemical shift assignments and secondary structure prediction of the phosphorelay protein VanU from Vibrio anguillarum

Bobay, B. G., Thompson, R. J., Milton, D. L., & Cavanagh, J. (2013, April 20). Biomolecular NMR Assignments.

Identification of BfmR, a Response Regulator Involved in Biofilm Development, as a Target for a 2-Aminoimidazole-Based Antibiofilm Agent

Thompson, R. J., Bobay, B. G., Stowe, S. D., Olson, A. L., Peng, L., Su, Z., … Cavanagh, J. (2012, November 27). Biochemistry.

Structural insights into the calcium‐dependent interaction between calbindin‐D28K and caspase‐3

Bobay, B. G., Stewart, A. L., Tucker, A. T., Thompson, R. J., Varney, K. M., & Cavanagh, J. (2012, September 13). FEBS Letters.

1H, 13C, and 15N resonance assignments and secondary structure prediction of the full-length transition state regulator AbrB from Bacillus anthracis

Olson, A. L., Bobay, B. G., Melander, C., & Cavanagh, J. (2011, August 3). Biomolecular NMR Assignments.

Binding site on human immunoglobulin G for the affinity ligand HWRGWV

Journal of Molecular Recognition, 23(3), 271–282.

Long range dynamic effects of point‐mutations trap a response regulator in an active conformation

Bobay, B. G., Thompson, R. J., Hoch, J. A., & Cavanagh, J. (2010, September 7). FEBS Letters.

NMR Solution Structure and DNA-binding Model of the DNA-binding Domain of Competence Protein A

Hobbs, C. A., Bobay, B. G., Thompson, R. J., Perego, M., & Cavanagh, J. (2010, March 18). Journal of Molecular Biology.

Structural Characterization of the Conformational Change in Calbindin-D_28k upon Calcium Binding Using Differential Surface Modification Analyzed by Mass Spectrometry

Hobbs, C. A., Deterding, L. J., Perera, L., Bobay, B. G., Thompson, R. J., Darden, T. A., … Tomer, K. B. (2009, August 6). Biochemistry.

Co-Evolving Motions at Protein−Protein Interfaces of Two-Component Signaling Systems Identified by Covariance Analysis†

Biochemistry, 47(30), 7782–7784.

Insights into the Nature of DNA Binding of AbrB-like Transcription Factors

Sullivan, D. M., Bobay, B. G., Kojetin, D. J., Thompson, R. J., Rance, M., Strauch, M. A., & Cavanagh, J. (2008, November 1). Structure.

Abh and AbrB Control of Bacillus subtilis Antimicrobial Gene Expression

Strauch, M. A., Bobay, B. G., Cavanagh, J., Yao, F., Wilson, A., & Breton, Y. L. (2007, August 25). Journal of Bacteriology.

Peptide binding proclivities of calcium loaded calbindin‐D28k

Kordys, D. R., Bobay, B. G., Thompson, R. J., Venters, R. A., & Cavanagh, J. (2007, September 11). FEBS Letters.

Predominantly buried residues in the response regulator Spo0F influence specific sensor kinase recognition

McLaughlin, P. D., Bobay, B. G., Regel, E. J., Thompson, R. J., Hoch, J. A., & Cavanagh, J. (2007, March 5). FEBS Letters.

Tandem mass spectrometry acquisition approaches to enhance identification of protein‐protein interactions using low‐energy collision‐induced dissociative chemical crosslinking reagents

Soderblom, E. J., Bobay, B. G., Cavanagh, J., & Goshe, M. B. (2007, September 28). Rapid Communications in Mass Spectrometry.

Targeting RNA with cysteine-constrained peptides

Burns, V. A., Bobay, B. G., Basso, A., Cavanagh, J., & Melander, C. (2007, December 5). Bioorganic & Medicinal Chemistry Letters.

NMR Structure of AbhN and Comparison with AbrBN

Bobay, B. G., Mueller, G. A., Thompson, R. J., Murzin, A. G., Venters, R. A., Strauch, M. A., & Cavanagh, J. (2006, May 16). Journal of Biological Chemistry.

Revised structure of the AbrB N‐terminal domain unifies a diverse superfamily of putative DNA‐binding proteins

Bobay, B. G., Andreeva, A., Mueller, G. A., Cavanagh, J., & Murzin, A. G. (2005, October 4). FEBS Letters.

Evaluation of the DNA Binding Tendencies of the Transition State Regulator AbrB†

Biochemistry, 43(51), 16106–16118.

Macromolecular Assembly of the Transition State Regulator AbrB in Its Unbound and Complexed States Probed by Microelectrospray Ionization Mass Spectrometry

Benson, L. M., Vaughn, J. L., Strauch, M. A., Bobay, B. G., Thompson, R., Naylor, S., & Cavanagh, J. (2002, July 1). Analytical Biochemistry.

Stoichiometries of Protein−Protein/DNA Binding and Conformational Changes for the Transition-State Regulator AbrB Measured by Pseudo Cell-Size Exclusion Chromatography−Mass Spectrometry

Cavanagh, J., Thompson, R., Bobay, B., Benson, L. M., & Naylor, S. (2002, June 1). Biochemistry.