@article{song_taniguchi_speckbacher_yu_bocian_lindsey_holten_2009, title={Excited-State Energy Flow in Phenylene-Linked Multiporphyrin Arrays}, volume={113}, ISSN={["1520-6106"]}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-67649303381&partnerID=MN8TOARS}, DOI={10.1021/jp902183g}, abstractNote={The dynamics and pathways for excited-state energy transfer in three dyads and five triads composed of combinations of zinc, magnesium, and free base porphyrins (denoted Zn, Mg, Fb) connected by p-phenylene linkers have been investigated. The processes in the triads include energy transfer between adjacent nonequivalent porphyrins, between adjacent equivalent porphyrins, and between nonadjacent nonequivalent porphyrins using the intervening porphyrin as a superexchange mediator. In the case of the triad ZnZnFbPhi, excitation of the zinc porphyrin (to yield Zn) ultimately leads to production of the excited free base porphyrin (Fb) via the three processes with the derived rate constants as follows: (2.8 ps)(-1) for ZnZn Fb --> ZnZnFb, (4 ps)(-1) for Zn ZnFb left arrow over right arrow ZnZn Fb, and (14 ps)(-1) for Zn ZnFb --> ZnZnFb. These results and those obtained for the other four triads show that energy transfer between nonadjacent sites is significant and is only 5-7-fold slower than between adjacent sites. This same scaling was found previously for arrays joined via diphenylethyne linkers. Simulations of the energy-transfer properties of fictive dodecameric arrays based on the data reported herein show that nonadjacent transfer steps make a significant contribution to the observed performance of such larger molecular architectures. Collectively, these results indicate that energy transfer between nonadjacent sites has important implications for the design of multichromophore arrays for molecular-photonic and solar-energy applications.}, number={23}, journal={JOURNAL OF PHYSICAL CHEMISTRY B}, publisher={American Chemical Society (ACS)}, author={Song, Hee-eun and Taniguchi, Masahiko and Speckbacher, Markus and Yu, Lianhe and Bocian, David F. and Lindsey, Jonathan S. and Holten, Dewey}, year={2009}, month={Jun}, pages={8011–8019} }
 @misc{yu_muthukumaran_sreedharan_lindsey_2008, title={Methods and intermediates for the synthesis of dipyrrin-substituted porphyrinic macrocycles}, volume={7,332,599}, number={2008 Feb. 19}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Yu, L. and Muthukumaran, K. and Sreedharan, P. and Lindsey, J. S.}, year={2008} }
 @article{ranjan_yu_nardelli_bernholc_2007, title={Phase Equilibria in High Energy Density PVDF-Based Polymers}, volume={99}, ISSN={0031-9007 1079-7114}, url={http://dx.doi.org/10.1103/PhysRevLett.99.047801}, DOI={10.1103/physrevlett.99.047801}, abstractNote={The phase diagrams of polyvinylidene fluoride (PVDF) and its copolymers with chlorotrifluoroethylene (CTFE) are investigated by first-principles calculations. Both PVDF and dilute P(VDF-CTFE) prefer nonpolar structures at zero field, but transform to a polar phase below the breakdown field. The critical field decreases with increasing CTFE content, facilitating the transformation. In disordered P(VDF-CTFE), a distribution of concentrations leads to a range of polar transitions, resulting in ultrahigh energy density. These results explain well experimental observations of very high-energy density in P(VDF-CTFE).}, number={4}, journal={Physical Review Letters}, publisher={American Physical Society (APS)}, author={Ranjan, V. and Yu, L. and Nardelli, Marco Buongiorno and Bernholc, J.}, year={2007}, month={Jul} }
 @article{song_kirmaier_schwartz_hindin_yu_bocian_lindsey_holten_2006, title={Effects of multiple pathways on excited-state energy flow in self-assembled wheel-and-spoke light-harvesting architectures}, volume={110}, ISSN={["1520-6106"]}, DOI={10.1021/jp064001a}, abstractNote={Static and time-resolved optical measurements are reported for three cyclic hexameric porphyrin arrays and their self-assembled complexes with guest chromophores. The hexameric hosts contain zinc porphyrins and 0, 1, or 2 free base (Fb) porphyrins (denoted Zn(6), Zn(5)Fb, or Zn(4)Fb(2), respectively). The guest is a core-modified (O replacing one of the four N atoms) dipyridyl-substituted Fb porphyrin (DPFbO) that coordinates to zinc porphyrins of a host via pyridyl-zinc dative bonding. Each architecture is designed to have a gradient of excited-state energies for excitation funneling among the weakly coupled constituents of the host to the guest. Energy transfer to the lowest-energy chromophore(s) (coordinated zinc porphyrins or Fb porphyrins) within a hexameric host occurs primarily via a through-bond (TB) mechanism, is rapid ( approximately 40 ps), and is essentially quantitative (>or=98%). Energy transfer from a pyridyl-coordinated zinc porphyrin of the host to the guest in the Zn(6)*DPFbO complex has a yield of approximately 75%, a rate constant of approximately (0.7 ns)(-1), and significant Förster through-space (TS) character. In the case of Zn(5)Fb*DPFbO, which has an additional TS route via the Fb porphyrin with a rate constant of approximately (20 ns)(-1), the yield of energy transfer to the guest is somewhat lower ( approximately 50%) than that for Zn(6)*DPFbO. Complex Zn(4)Fb(2)*DPFbO has an identical TS pathway via the Fb porphyrin plus an additional TS pathway involving the second Fb porphyrin (closer to the guest) with a rate constant of approximately (0.5 ns)(-1). This complex exhibits an energy-transfer yield to the guest that is significantly enhanced over that for Zn(5)Fb*DPFbO and comparable to that for Zn(6)*DPFbO. Collectively, the results for the various arrays suggest designs for similar host-guest complexes that are expected to exhibit much more efficient light harvesting and excitation trapping at the central guest chromophore.}, number={39}, journal={JOURNAL OF PHYSICAL CHEMISTRY B}, author={Song, Hee-eun and Kirmaier, Christine and Schwartz, Jennifer K. and Hindin, Eve and Yu, Lianhe and Bocian, David F. and Lindsey, Jonathan S. and Holten, Dewey}, year={2006}, month={Oct}, pages={19131–19139} }
 @article{song_kirmaier_schwartz_hindin_yu_bocian_lindsey_holten_2006, title={Mechanisms, pathways, and dynamics of excited-state energy flow in self-assembled wheel-and-spoke light-harvesting architectures}, volume={110}, ISSN={["1520-6106"]}, DOI={10.1021/jp064000i}, abstractNote={Static and time-resolved optical measurements are reported for two cyclic hexameric porphyrin arrays and their self-assembled complexes with guest chromophores. The hexameric hosts contain zinc porphyrins and 0 or 3 free base (Fb) porphyrins (denoted Zn(6) or Zn(3)Fb(3), respectively). The guests are a tripyridyl arene (TP) and a dipyridyl-substituted free base porphyrin (DPFb), each of which coordinates to zinc porphyrins of a host via pyridyl-zinc dative bonding. Each architecture is designed to have an overall gradient of excited-state energies that affords excitation funneling within the host and ultimately to the guest. Collectively, the studies delineate the various pathways, mechanisms, and rate constants of energy flow among the weakly coupled constituents of the host-guest complexes. The pathways include downhill unidirectional energy transfer between adjacent chromophores, bidirectional energy migration between identical chromophores, and energy transfer between nonadjacent chromophores. The energy transfer to the lowest-energy chromophore(s) within the backbone of a hexameric host (Fb porphyrins in Zn(3)Fb(3) or pyridyl-coordinated zinc porphyrins in Zn(6)*TP and Zn(6)*DPFb) proceeds primarily via a through-bond mechanism; the transfer is rapid (approximately 40 ps depending on the array) and essentially quantitative (>or=98%). The energy transfer from a pyridyl-coordinated zinc porphyrin of the host to the Fb porphyrin guest in the Zn(6)*DPFb complex is almost exclusively Förster through-space in nature; this process is much slower ( approximately 1 ns) and has a lower yield (65%). These studies highlight the utility of cyclic architectures for efficient light harvesting and energy transfer to a designated trapping site.}, number={39}, journal={JOURNAL OF PHYSICAL CHEMISTRY B}, author={Song, Hee-eun and Kirmaier, Christine and Schwartz, Jennifer K. and Hindin, Eve and Yu, Lianhe and Bocian, David F. and Lindsey, Jonathan S. and Holten, Dewey}, year={2006}, month={Oct}, pages={19121–19130} }
 @article{thamyongkit_yu_padmaja_jiao_bocian_lindsey_2006, title={Porphyrin dyads bearing carbon tethers for studies of high-density molecular charge storage on silicon surfaces}, volume={71}, ISSN={["1520-6904"]}, DOI={10.1021/jo0522761}, abstractNote={Redox-active molecules that afford high charge density upon attachment to an electroactive surface are of interest for use in molecular-based information-storage applications. One strategy for increasing charge density is to covalently link a second redox center to the first in an architecture that uses the vertical dimension in essentially the same molecular footprint. Toward this end, a set of four new porphyrin dyads have been prepared and characterized. Each dyad consists of two zinc porphyrins, an intervening linker (p-phenylene or 4,4'-diphenylethyne), and a surface attachment group (ethynyl or triallyl group). The porphyrin dyads were attached to an electroactive Si(100) surface and interrogated via electrochemical and FTIR techniques. The charge density obtainable for the ethynyl-functionalized porphyrin dyads is approximately double that observed for an analogously functionalized monomer, whereas that for the triallyl-functionalized dyads is at most 40% larger. These results indicate that the molecular footprint of the former dyads is similar to that of a monomer while that of the latter dyads is larger. For both the ethynyl- and triallyl-functionalized porphyrin dyads, higher charge densities (smaller molecular footprints) are obtained for the molecules containing the 4,4'-diphenylethyne versus the p-phenylene linker. This feature is attributed to the enhanced torsional flexibility of the former linker compared with that of the latter, which affords better packed monolayers. The FTIR studies indicate that the adsorption geometry of all the dyads is qualitatively similar and similar to that of monomers. However, the dyads containing the 4,4'-diphenylethyne linker sit somewhat more upright on the surface than those containing the p-phenylene linker, generally consistent with the smaller molecular footprint for the former dyads. Collectively, the high surface charge density (34-58 muC.cm(-)(2)) of the porphyrin dyads makes these constructs viable candidates for molecular-information-storage applications.}, number={3}, journal={JOURNAL OF ORGANIC CHEMISTRY}, author={Thamyongkit, P and Yu, LH and Padmaja, K and Jiao, JY and Bocian, DF and Lindsey, JS}, year={2006}, month={Feb}, pages={1156–1171} }
 @misc{lindsey_tamaru_yu_2005, title={Facile synthesis of 1,9-diacyldipyrromethanes}, volume={6,924,375}, publisher={Washington, DC: U.S. Patent and Trademark Office}, author={Lindsey, J. S. and Tamaru, S.-I. and Yu, L.}, year={2005} }
 @misc{methods of making porphyrins and related compounds with lewis acids_2005, volume={6,849,730}, number={2005 Feb. 1}, publisher={Washington, DC: U.S. Patent and Trademark Office}, year={2005} }
 @article{kee_kirmaier_yu_thamyongkit_youngblood_calder_ramos_noll_bocian_scheidt_et al._2005, title={Structural control of the photodynamics of boron-dipyrrin complexes}, volume={109}, ISSN={["1520-5207"]}, DOI={10.1021/jp0525078}, abstractNote={Boron-dipyrrin chromophores containing a 5-aryl group with or without internal steric hindrance toward aryl rotation have been synthesized and then characterized via X-ray diffraction, static and time-resolved optical spectroscopy, and theory. Compounds with a 5-phenyl or 5-(4-tert-butylphenyl) group show low fluorescence yields (approximately 0.06) and short excited-singlet-state lifetimes (approximately 500 ps), and decay primarily (>90%) by nonradiative internal conversion to the ground state. In contrast, sterically hindered analogues having an o-tolyl or mesityl group at the 5-position exhibit high fluorescence yields (approximately 0.9) and long excited-state lifetimes (approximately 6 ns). The X-ray structures indicate that the phenyl or 4-tert-butylphenyl ring lies at an angle of approximately 60 degrees with respect to the dipyrrin framework whereas the angle is approximately 80 degrees for mesityl or o-tolyl groups. The calculated potential energy surface for the phenyl-substituted complex indicates that the excited state has a second, lower energy minimum in which the nonhindered aryl ring rotates closer to the mean plane of the dipyrrin, which itself undergoes some distortion. This relaxed, distorted excited-state conformation has low radiative probability as well as a reduced energy gap from the ground state supporting a favorable vibrational overlap factor for nonradiative deactivation. Such a distorted conformation is energetically inaccessible in a complex bearing the sterically hindered o-tolyl or mesityl group at the 5-position, leading to a high radiative probability involving conformations at or near the initial Franck-Condon form of the excited state. These combined results demonstrate the critical role of aryl-ring rotation in governing the excited-state dynamics of this class of widely used dyes.}, number={43}, journal={JOURNAL OF PHYSICAL CHEMISTRY B}, author={Kee, HL and Kirmaier, C and Yu, LH and Thamyongkit, P and Youngblood, WJ and Calder, ME and Ramos, L and Noll, BC and Bocian, DF and Scheidt, WR and et al.}, year={2005}, month={Nov}, pages={20433–20443} }
 @article{muthukumaran_zaidi_yu_thamyongkit_calder_sharada_lindsey_2005, title={Synthesis of dipyrrin-containing architectures}, volume={9}, ISSN={["1099-1409"]}, DOI={10.1142/S108842460500085X}, abstractNote={ Dipyrrins are valuable precursors to dyes [dipyrrinatoboron difluoride, bis(dipyrrinato)-zinc(II) complexes] and serve as ligands in a variety of self-assembled materials. Six new dipyrrin-containing architectures have been synthesized. The architectures include bis(dipyrrinato) complexes containing copper(II) or palladium(II), a dipyrrin bearing a protected phosphonic acid unit, a porphyrin bearing two dipyrrins in a trans configuration, a linear diphenylethyne-linked dipyrromethane-dipyrrin building block, and a triad composed of two zinc porphyrins joined via an intervening bis(dipyrrinato)copper(II) complex. Two porphodimethenatozinc complexes were prepared and found to have Φ f  ≤ 0.002 (in toluene at room temperature), which is substantially less than the analogous bis(dipyrrinato)zinc complexes. Taken together, the syntheses described herein should broaden access to dipyrrins for use as complexation motifs in supramolecular chemistry and as pigments in light-harvesting applications. }, number={10-11}, journal={JOURNAL OF PORPHYRINS AND PHTHALOCYANINES}, author={Muthukumaran, Kannan and Zaidi, Syeda Huma H. and Yu, Lianhe and Thamyongkit, Patchanita and Calder, Matthew E. and Sharada, Duddu S. and Lindsey, Jonathan S.}, year={2005}, pages={745–759} }
 @article{tamaru_yu_youngblood_muthukumaran_taniguchi_lindsey_2004, title={A tin-complexation strategy for use with diverse acylation methods in the preparation of 1,9-diacyldipyrromethanes}, volume={69}, ISSN={["0022-3263"]}, url={http://www.scopus.com/inward/record.url?eid=2-s2.0-0842285782&partnerID=MN8TOARS}, DOI={10.1021/jo035622s}, abstractNote={The acylation of dipyrromethanes to form 1,9-diacyldipyrromethanes is an essential step in the rational synthesis of porphyrins. Although several methods for acylation are available, purification is difficult because 1,9-diacyldipyrromethanes typically streak extensively upon chromatography and give amorphous powders upon attempted crystallization. A solution to this problem has been achieved by reacting the 1,9-diacyldipyrromethane with Bu(2)SnCl(2) to give the corresponding dibutyl(5,10-dihydrodipyrrinato)tin(IV) complex. The reaction is selective for dipyrromethanes that bear acyl groups at both the 1- and 9-positions but otherwise is quite tolerant of diverse substituents. The diacyldipyrromethane-tin complexes are stable to air and water, are highly soluble in common organic solvents, crystallize readily, and chromatograph without streaking. Four methods (Friedel-Crafts, Grignard, Vilsmeier, benzoxathiolium salt) were examined for the direct 1,9-diacylation of a dipyrromethane or the 9-acylation of a 1-acyldipyrromethane. In each case, treatment of the crude reaction mixture with Bu(2)SnCl(2) and TEA at room temperature enabled facile isolation of multigram quantities of the 1,9-diacyldipyrromethane-tin complex. The diacyldipyrromethane-tin complexes could be decomplexed with TFA in nearly quantitative yield. Alternatively, use of a diacyldipyrromethane-tin complex in a porphyrin-forming reaction (reduction with NaBH(4), acid-catalyzed condensation with a dipyrromethane, DDQ oxidation) afforded the desired free base porphyrin in yield comparable to that obtained from the uncomplexed diacyldipyrromethane. The acylation/tin-complexation strategy has been applied to a bis(dipyrromethane) and a porphyrin-dipyrromethane. In summary, the tin-complexation strategy has broad scope, is compatible with diverse acylation methods, and greatly facilitates access to 1,9-diacyldipyrromethanes.}, number={3}, journal={JOURNAL OF ORGANIC CHEMISTRY}, publisher={American Chemical Society (ACS)}, author={Tamaru, S and Yu, LH and Youngblood, WJ and Muthukumaran, K and Taniguchi, M and Lindsey, JS}, year={2004}, month={Feb}, pages={765–777} }
 @article{li_mathur_gowda_surthi_zhao_yu_lindsey_bocian_misra_2004, title={Multibit memory using self-assembly of mixed ferrocene/porphyrin monolayers on silicon}, volume={16}, ISSN={["1521-4095"]}, DOI={10.1002/adma.200305680}, abstractNote={An alternative strategy for achieving multi‐bit functionality, which uses mixed self‐assembled monolayers of a benzyl alcohol‐tethered ferrocene (Fc‐BzOH) and a benzyl alcohol‐tethered porphyrin (Por‐BzOH) on silicon surfaces to achieve a four‐state (2‐bit) memory element, is presented. The four states include the neutral state and three distinct cationic states obtained upon oxidation of Fc‐BzOH (monopositive) and Por‐BzOH (monopositive, dipositive) molecules. Conventional cyclic voltammetry, capacitance, and conductance methods have been used to characterize the mixed monolayer.}, number={2}, journal={ADVANCED MATERIALS}, author={Li, QL and Mathur, G and Gowda, S and Surthi, S and Zhao, Q and Yu, LH and Lindsey, JS and Bocian, DF and Misra, V}, year={2004}, month={Jan}, pages={133-+} }
 @article{tiede_zhang_chen_yu_lindsey_2004, title={Structural characterization of modular supramolecular architectures in solution}, volume={126}, ISSN={["1520-5126"]}, DOI={10.1021/ja048209q}, abstractNote={Structures of modular supramolecular architectures consisting of a hexameric, diphenylethyne-linked porphyrin macrocyclic array and the corresponding host-guest complex formed by inclusion of a tripyridyl guest molecule were characterized in solution using high-angle X-ray scattering. Scattering measurements made to 6 A resolution coupled with pair distance function (PDF) analyses demonstrated that (1) the porphyrin architectures are not rigid but are distributed across a conformational ensemble with a mean diameter that is 1.5 A shorter than the diameter of a symmetric, energy-minimized model structure, (2) the conformational envelope has limits of 3 A positional dispersion and full rotational freedom for all six porphyrin groups, and (3) insertion of the tripyridyl guest molecule expands the diameter of the host conformer by 0.6 A and decreases the configurational dispersion by approximately 2-fold. These results validate the molecular design, provide a new measure of conformational ensembles in solution that cannot be obtained by other techniques, and establish a structural basis for understanding the photophysical and guest-hosting functions of the hexameric porphyrin architectures in liquids.}, number={43}, journal={JOURNAL OF THE AMERICAN CHEMICAL SOCIETY}, author={Tiede, DM and Zhang, RT and Chen, LX and Yu, LH and Lindsey, JS}, year={2004}, month={Nov}, pages={14054–14062} }
 @article{sazanovich_kirmaier_hindin_yu_bocian_lindsey_holten_2004, title={Structural control of the excited-state dynamics of bis(dipyrrinato)zinc complexes: Self-assembling chromophores for light-harvesting architectures}, volume={126}, ISSN={["1520-5126"]}, DOI={10.1021/ja038763k}, abstractNote={The replacement of the phenyl rings at the 5,5'-positions of a bis(dipyrrinato)zinc complex with mesityl groups transforms the molecule from a very weak emitter that deactivates rapidly after photoexcitation (Phif = 0.006; tau approximately 90 ps) to a highly fluorescent chromophore with a long-lived singlet excited state (Phif = 0.36; tau approximately 3 ns). The results demonstrate that steric constraints on aryl-ring internal rotation dramatically alter the excited-state properties of 5,5'-substituted bis(dipyrrinato)metal complexes. The insights establish the foundation for tuning the photophysical properties of these chromophores for use in diverse photochemical applications.}, number={9}, journal={JOURNAL OF THE AMERICAN CHEMICAL SOCIETY}, author={Sazanovich, IV and Kirmaier, C and Hindin, E and Yu, LH and Bocian, DF and Lindsey, JS and Holten, D}, year={2004}, month={Mar}, pages={2664–2665} }
 @article{yu_muthukumaran_sazanovich_kirmaier_hindin_diers_boyle_bocian_holten_lindsey_2003, title={Excited-state energy-transfer dynamics in self-assembled triads composed of two porphyrins and an intervening bis(dipyrrinato)metal complex}, volume={42}, ISSN={["1520-510X"]}, DOI={10.1021/ic034559m}, abstractNote={The synthesis and characterization of various triads composed of a linear array of two zinc porphyrins joined via an intervening bis(dipyrrinato)metal(II) complex are reported. The preparation exploits the facile complexation of dipyrrins with divalent metal ions to give bis(dipyrrinato)metal(II) complexes [abbreviated (dp)(2)M]. Copper(II) and palladium(II) chelates of dipyrrins (available by oxidation of dipyrromethanes) were prepared in 50-80% yield. A one-flask synthesis of bis(dipyrrinato)zinc(II) complexes was developed by oxidation of a dipyrromethane with DDQ or p-chloranil in the presence of Zn(OAc)(2).2H(2)O in THF ( approximately 80% yield). Three routes were developed for preparing porphyrin-dipyrrins: (1). Suzuki coupling of a boronate-substituted zinc porphyrin (ZnP) and bis[5-(4-iodophenyl)dipyrrinato]Pd(II) to give the (ZnP-dp)(2)Pd triad (50% yield), followed by selective demetalation of the (dp)(2)Pd unit by treatment with 1,4-dithiothreitol under neutral conditions (71% yield); (2). oxidation of a porphyrin-dipyrromethane with p-chloranil in the presence of Zn(OAc)(2).2H(2)O followed by chromatography on silica gel (71% yield); and (3). condensation of a dipyrrin-dipyrromethane and a dipyrromethane-dicarbinol under InCl(3) catalysis followed by oxidation with DDQ (10-16% yield). Four triads of form (ZnP-dp)(2)Zn were prepared in 83-97% yield by treatment of a porphyrin-dipyrrin with Zn(OAc)(2).2H(2)O at room temperature. Free base dipyrrins typically absorb at 430-440 nm, while the bis(dipyrrinato)metal complexes absorb at 460-490 nm. The fluorescence spectra/yields and excited-state lifetimes of the (ZnP-dp)(2)Zn triad in toluene show (1). efficient energy transfer from the bis(dipyrrinato)zinc(II) chromophore to the zinc porphyrins (98.5% yield), and (2). little or no quenching of the resulting excited zinc porphyrin relative to the isolated chromophore. Taken together, these results indicate that bis(dipyrrinato)zinc(II) complexes can serve as self-assembling linkers that further function as secondary light-collection elements in porphyrin-based light-harvesting arrays.}, number={21}, journal={INORGANIC CHEMISTRY}, author={Yu, LH and Muthukumaran, K and Sazanovich, IV and Kirmaier, C and Hindin, E and Diers, JR and Boyle, PD and Bocian, DF and Holten, D and Lindsey, JS}, year={2003}, month={Oct}, pages={6629–6647} }
 @article{speckbacher_yu_lindsey_2003, title={Formation of porphyrins in the presence of acid-labile metalloporphyrins: A new route to mixed-metal multiporphyrin arrays}, volume={42}, ISSN={["1520-510X"]}, DOI={10.1021/ic026206d}, abstractNote={The ability to incorporate distinct metalloporphyrins at designated sites in multiporphyrin arrays is essential for diverse applications in materials and biomimetic chemistry. The synthesis of such mixed-metal arrays via acid catalyzed reactions has largely been restricted to metalloporphyrins of stability class II (e.g., Cu, Co, Ni) or I. We describe routes for the rational synthesis of mixed-metal arrays via acid-catalyzed condensations that are compatible with metalloporphyrins of stability class III (e.g., Zn) and IV (e.g., Mg). The routes are demonstrated for p-phenylene-linked arrays. The key finding is that several mild Lewis acids [InCl(3), Sc(OTf)(3), Yb(OTf)(3), and Dy(OTf)(3)], which are known to catalyze the dipyrromethane + dipyrromethane-dicarbinol condensation in CH(2)Cl(2) at room temperature without acidolysis, do not demetalate zinc or magnesium porphyrins under the same conditions. Rational routes to porphyrin dyads and triads employ reaction of a (porphyrin)-dipyrromethane and a (porphyrin)-dipyrromethane-dicarbinol. The porphyrin-forming reactions (six examples) proceed in yields of 18-28%. The metalation states of the arrays prepared in this manner include Zn-free base (ZnFb), MgFb, ZnFbMg, ZnFbZn, and ZnFbFb. Studies of the catalysis process indicate that the dipyrromethane + dipyrromethane-dicarbinol condensation is catalyzed by both the Lewis acid and a Brønsted acid derived in situ from the Lewis acid. Taken together, the ability to employ otherwise "acid-labile" metalloporphyrins as precursors in condensation procedures should broaden the scope of accessible mixed-metal multiporphyrin arrays and motivate further studies of the application of mild Lewis acid catalysts in porphyrin chemistry.}, number={14}, journal={INORGANIC CHEMISTRY}, author={Speckbacher, M and Yu, LH and Lindsey, JS}, year={2003}, month={Jul}, pages={4322–4337} }
 @article{tomizaki_yu_wei_bocian_lindsey_2003, title={Synthesis of cyclic hexameric porphyrin arrays. Anchors for surface immobilization and columnar self-assembly}, volume={68}, ISSN={["1520-6904"]}, DOI={10.1021/jo034861c}, abstractNote={To investigate new architectures for the self-assembly of multiporphyrin arrays, a one-flask synthesis of a shape-persistent cyclic hexameric array of porphyrins was exploited to prepare six derivatives bearing diverse pendant groups. The new arrays contain 6-12 carboxylic acid groups, 12 amidino groups, 6 thiol groups, or 6 thiol groups and 6 carboxylic acid groups in protected form (S-acetylthio, TMS-ethyl, TMS-ethoxycarbonyl). The arrays contain alternating Zn and free base (Fb) porphyrins or all Zn porphyrins. The one-flask synthesis entails a template-directed, Pd-mediated coupling of a p/p'-substituted diethynyl Zn porphyrin and a m/m'-substituted diiodo Fb porphyrin. The porphyrin building blocks (trans-A(2)B(2), trans-AB(2)C) contain the protected pendant groups at nonlinking meso positions. A self-assembled monolayer (SAM) of a Zn(3)Fb(3) cyclic hexamer containing one thiol group on each porphyrin was prepared on a gold electrode and the surface-immobilized architecture was examined electrochemically. Together, the work reported herein provides cyclic hexameric porphyrin arrays for studies of self-assembly in solution or on surfaces.}, number={21}, journal={JOURNAL OF ORGANIC CHEMISTRY}, author={Tomizaki, KY and Yu, LH and Wei, LY and Bocian, DF and Lindsey, JS}, year={2003}, month={Oct}, pages={8199–8207} }
 @article{roth_yasseri_liu_dabke_malinovskii_schweikart_yu_tiznado_zaera_lindsey_et al._2003, title={Measurements of electron-transfer rates of charge-storage molecular monolayers on Si(100). Toward hybrid molecular/semiconductor information storage devices}, volume={125}, ISSN={["0002-7863"]}, DOI={10.1021/ja021169a}, abstractNote={Redox kinetics were measured for two electroactive molecules attached to Si(100) surfaces, a ferrocene (Fc-BzOH) and a Zn(II) trimesitylporphyrin (Por-BzOH). Each molecule was derivatized with a benzyl alcohol linker for attachment to the Si surface via the formation of a Si-O bond. A complete protocol was developed for the preparation of stable Si(100) surfaces derivatized with the electroactive molecules. The redox-kinetic measurements were performed on the resulting Fc-BzOH and Por-BzOH monolayers to probe (1) the rate of electron transfer (k0) for oxidation in the presence of applied potentials and (2) the rate of charge dissipation after the applied potential is disconnected (in the form of a charge-retention half-life t1/2). The k0 values for the two types of monolayers were found to be similar to one another as were the t1/2 values. Perhaps more importantly, the electron-transfer rates for both the Fc-BzOH and the Por-BzOH monolayers differ from the charge-dissipation rates by approximately 6 orders of magnitude and are strongly dependent on the surface concentration of the electroactive species. For the Por-BzOH monolayers on Si(100), the k0 and t1/2 values and their trends as a function of surface coverage were determined to be similar to those previously measured for the analogous thiol-derivatized molecule assembled on Au(111). In contrast, the Fc-BzOH monolayers on Si(100) were found to exhibit much slower electron-transfer and charge-dissipation rates than those in the corresponding thiol-Au(111) case. Two alternative hypotheses are advanced to explain both the diminution in rates with increased surface coverage and the contrasting behavior with the analogous thiols on Au, one based on space-charge effects at the monolayer-solution interface, and a second relying on changes in distance of the redox centers from the surface as modulated by the orientation of the linking chains. Collectively, the ability to prepare and study stable, electroactive molecular media on Si(100) is likely to be key in the development of hybrid molecular/semiconductor devices.}, number={2}, journal={JOURNAL OF THE AMERICAN CHEMICAL SOCIETY}, author={Roth, KM and Yasseri, AA and Liu, ZM and Dabke, RB and Malinovskii, V and Schweikart, KH and Yu, LH and Tiznado, H and Zaera, F and Lindsey, JS and et al.}, year={2003}, month={Jan}, pages={505–517} }