Steve Diener
Works (8)
Updated: July 5th, 2023 15:59
2008 journal article
Sequence and genetic map of Meloidogyne hapla: A compact nematode genome for plant parasitism
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 105(39), 14802–14807.
Contributors: C. Opperman n, D. Bird n , V. Williamson *, D. Rokhsar *, M. Burke n, J. Cohn n, J. Cromer n, n
author keywords: compaction; dauer; development; horizontal gene transfer; gene
MeSH headings : Animals; Base Sequence; Caenorhabditis elegans / genetics; Chromosome Mapping; Evolution, Molecular; Gene Duplication; Gene Transfer, Horizontal; Genome, Helminth; Host-Parasite Interactions / genetics; Molecular Sequence Data; Multigene Family; Operon; Phylogeny; Plants / parasitology; Synteny; Tylenchoidea / genetics
TL;DR:
Meloidogyne hapla is established as a tractable model plant-parasitic nematode amenable to forward and reverse genetics, and a complete genome sequence is presented that defines a platform to elucidate mechanisms of parasitism by what is the largest uncontrolled group of plant pathogens worldwide.
(via Semantic Scholar)
www.pnas.org (publisher PDF)
UN Sustainable Development Goal Categories
Sources: Web Of Science, ORCID
Added: August 6, 2018
2006 journal article
The role of transposable element clusters in genome evolution and loss of synteny in the rice blast fungus Magnaporthe oryzae
Genome Biology, 7(2).
Source: NC State University Libraries
Added: August 6, 2018
2005 journal article
Alkahest NuclearBLAST: a user-friendly BLAST management and analysis system
BMC Bioinformatics, 6.
Source: NC State University Libraries
Added: August 6, 2018
2005 journal article
PACLIMS: A component LIM system for high-throughput functional genomic analysis
BMC Bioinformatics, 6.
Source: NC State University Libraries
Added: August 6, 2018
2004 journal article
Characterization of the protein processing and secretion pathways in a comprehensive set of expressed sequence tags from Trichoderma reesei
FEMS MICROBIOLOGY LETTERS, 230(2), 275–282.
author keywords: secretion; protein processing; Trichoderma reesei; expressed sequence tag
MeSH headings : Computational Biology; Expressed Sequence Tags; Fungal Proteins / genetics; Fungal Proteins / metabolism; Gene Library; Protein Processing, Post-Translational; Protein Transport; Sequence Analysis, DNA; Trichoderma / genetics
TL;DR:
In an attempt to identify genes involved in protein folding and ornamentation steps in Trichoderma reesei, the 5' ends of 21888 cDNA clones were sequenced from which a unique set of over 5000 were also 3' sequenced.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2004 article
Characterization of the protein processing and secretion pathways in a comprehensive set of expressed sequence tags from Trichoderma reesei (vol 230, pg 275, 2004)
FEMS Microbiology Letters, Vol. 235, p. 209.
Sources: NC State University Libraries, ORCID
Added: August 6, 2018
2004 journal article
Insight into Trichoderma reesei's genome content, organization and evolution revealed through BAC library characterization
FUNGAL GENETICS AND BIOLOGY, 41(12), 1077–1087.
author keywords: Trichoderma reesei; bacterial artificial chromosome (BAC); physical map; genome organization; secretion; biomass degradation; repetitive element
MeSH headings : Chromosome Mapping; Chromosomes, Artificial, Bacterial; Contig Mapping; DNA Fingerprinting; DNA Transposable Elements / genetics; DNA, Fungal / chemistry; DNA, Fungal / genetics; DNA, Fungal / isolation & purification; Fungal Proteins / genetics; Fungal Proteins / physiology; Genome, Fungal; Genomic Library; Molecular Sequence Data; Nucleic Acid Hybridization; Podospora / genetics; Polymorphism, Restriction Fragment Length; Sequence Analysis, DNA; Sequence Homology; Trichoderma / enzymology; Trichoderma / genetics
TL;DR:
A genomic framework for Trichoderma reesei is created and several copies of an element with similarity to the Podospora anserina transposon, PAT are identified.
(via Semantic Scholar)
UN Sustainable Development Goal Categories
7. Affordable and Clean Energy
(Web of Science)
12. Responsible Consumption and Production
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
2003 journal article
Transcriptional regulation of biomass-degrading enzymes in the filamentous fungus Trichoderma reesei
JOURNAL OF BIOLOGICAL CHEMISTRY, 278(34), 31988–31997.
MeSH headings : Biomass; DNA, Complementary; Enzymes / genetics; Enzymes / metabolism; Expressed Sequence Tags; Gene Expression Regulation, Enzymologic; Gene Expression Regulation, Fungal; Hydrolysis; Molecular Sequence Data; Transcription, Genetic; Trichoderma / enzymology
UN Sustainable Development Goal Categories
7. Affordable and Clean Energy
(Web of Science)
12. Responsible Consumption and Production
(Web of Science)
Sources: Web Of Science, ORCID
Added: August 6, 2018
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