@article{shimizu_reininga_caicedo_mays_moore_olsen_ruzsa_coop_bustamante_purugganan_2008, title={Darwinian selection on a selfing locus (vol 306, pg 2081, 2004)}, volume={320}, number={5873}, journal={Science}, author={Shimizu, K. K. and Reininga, J. M. and Caicedo, A. L. and Mays, C. A. and Moore, R. C. and Olsen, K. M. and Ruzsa, S. and Coop, G. and Bustamante, C. D. and Purugganan, M. D.}, year={2008}, pages={176–176} } @article{moore_grant_purugganan_2005, title={Molecular population genetics of redundant floral-regulatory genes in Arabidopsis thaliana}, volume={22}, number={1}, journal={Molecular Biology and Evolution}, author={Moore, R. C. and Grant, S. R. and Purugganan, M. D.}, year={2005}, pages={91–103} } @misc{moore_purugganan_2005, title={The evolutionary dynamics of plant duplicate genes}, volume={8}, ISSN={["1879-0356"]}, DOI={10.1016/j.pbi.2004.12.001}, abstractNote={Given the prevalence of duplicate genes and genomes in plant species, the study of their evolutionary dynamics has been a focus of study in plant evolutionary genetics over the past two decades. The past few years have been a particularly exciting time because recent theoretical and experimental investigations have led to a rethinking of the classic paradigm of duplicate gene evolution. By combining recent advances in genomic analysis with a new conceptual framework, researchers are determining the contributions of single-gene and whole-genome duplications to the diversification of plant species. This research provides insights into the roles that gene and genome duplications play in plant evolution.}, number={2}, journal={CURRENT OPINION IN PLANT BIOLOGY}, author={Moore, RC and Purugganan, MD}, year={2005}, month={Apr}, pages={122–128} } @article{shimizu_cork_caicedo_mays_moore_olsen_ruzsa_coop_bustamante_awadalla_et al._2004, title={Darwinian selection on a selfing locus (Retracted Article. See vol 320, pg 176, 2008)}, volume={306}, ISSN={["1095-9203"]}, DOI={10.1126/science.1103776}, abstractNote={ The shift to self-pollination is one of the most prevalent evolutionary transitions in flowering plants. In the selfing plant Arabidopsis thaliana , pseudogenes at the SCR and SRK self-incompatibility loci are believed to underlie the evolution of self-fertilization. Positive directional selection has driven the evolutionary fixation of pseudogene alleles of SCR , leading to substantially reduced nucleotide variation. Coalescent simulations indicate that this adaptive event may have occurred very recently and is possibly associated with the post-Pleistocene expansion of A. thaliana from glacial refugia. This suggests that ancillary morphological innovations associated with self-pollination can evolve rapidly after the inactivation of the self-incompatibility response. }, number={5704}, journal={SCIENCE}, author={Shimizu, KK and Cork, JM and Caicedo, AL and Mays, CA and Moore, RC and Olsen, KM and Ruzsa, S and Coop, G and Bustamante, CD and Awadalla, P and et al.}, year={2004}, month={Dec}, pages={2081–2084} } @article{moore_2004, title={Evolutionary genetics - Autosomes behaving badly}, volume={93}, ISSN={["0018-067X"]}, DOI={10.1038/sj.hdy.6800501}, number={2}, journal={HEREDITY}, author={Moore, RC}, year={2004}, month={Aug}, pages={126–127} } @misc{friedman_moore_purugganan_2004, title={The evolution of plant development}, volume={91}, ISSN={["1537-2197"]}, DOI={10.3732/ajb.91.10.1726}, abstractNote={The last decade has witnessed a resurgence in the study of the evolution of plant development, combining investigations in systematics, developmental morphology, molecular developmental genetics, and molecular evolution. The integration of phylogenetic studies, structural analyses of fossil and extant taxa, and molecular developmental genetic information allows the formulation of explicit and testable hypotheses for the evolution of morphological characters. These comprehensive approaches provide opportunities to dissect the evolution of major developmental transitions among land plants, including those associated with apical meristems, the origins of the root/shoot dichotomy, diversification of leaves, and origin and subsequent modification of flower structure. The evolution of these major developmental innovations is discussed within both phylogenetic and molecular genetic contexts. We conclude that it is the combination of these approaches that will lead to the greatest understanding of the evolution of plant development.}, number={10}, journal={AMERICAN JOURNAL OF BOTANY}, author={Friedman, WE and Moore, RC and Purugganan, MD}, year={2004}, month={Oct}, pages={1726–1741} }