Yang Ju Im

Works (11)

Updated: July 5th, 2023 15:57

2014 journal article

Do phosphoinositides regulate membrane water permeability of tobacco protoplasts by enhancing the aquaporin pathway?

Planta, 241(3), 741–755.

By: X. Ma*, A. Shatil-Cohen*, S. Ben-Dor *, N. Wigoda *, I. Perera n , Y. Im n, S. Diminshtein*, L. Yu * ...

author keywords: BY2; Lipid; Osmotic water permeability coefficient; P-f; Signaling; Synthetic-biology
MeSH headings : Aquaporins / metabolism; Cell Membrane Permeability; Cells, Cultured; Cytosol / metabolism; Hydrogen-Ion Concentration; Phosphatidylinositols / metabolism; Protoplasts; Tobacco; Water / metabolism
TL;DR: Three results demonstrate the differences between the PIPK cells and their controls, and suggest a hitherto unobserved regulation of aquaporins by phosphoinositides, which could occur through direct interaction or indirect phosphoinosis-dependent cellular effects. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries, Crossref
Added: August 6, 2018

2013 journal article

Phosphatidylinositol 4,5-Bisphosphate Influences PIN Polarization by Controlling Clathrin-Mediated Membrane Trafficking in Arabidopsis

The Plant Cell, 25(12), 4894–4911.

By: T. Ischebeck *, S. Werner*, P. Krishnamoorthy *, J. Lerche*, M. Meijón *, I. Stenzel *, C. Löfke *, T. Wiessner* ...

MeSH headings : Arabidopsis / cytology; Arabidopsis / genetics; Arabidopsis / growth & development; Arabidopsis / metabolism; Arabidopsis Proteins / analysis; Arabidopsis Proteins / metabolism; Biological Transport; Cell Polarity; Clathrin-Coated Vesicles / physiology; Endocytosis; Green Fluorescent Proteins / analysis; Indoleacetic Acids / metabolism; Membrane Transport Proteins / analysis; Membrane Transport Proteins / metabolism; Mutation; Phenotype; Phosphatidylinositol 4,5-Diphosphate / physiology; Phosphotransferases (Alcohol Group Acceptor) / genetics
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Sources: Web Of Science, NC State University Libraries, Crossref
Added: August 6, 2018

2012 article

Phosphoinositide Signaling

ANNUAL REVIEW OF PLANT BIOLOGY, VOL 63, Vol. 63, pp. 409–429.

By: W. Boss n & Y. Im*

author keywords: phosphatidylinositol; inositol lipids; plant; PIP modulin; flux; networking
MeSH headings : Cell Nucleus / metabolism; Humans; Light; Phosphatidylinositol Phosphates / metabolism; Phosphatidylinositols / biosynthesis; Phosphatidylinositols / metabolism; Phosphorylation; Plant Development / physiology; Signal Transduction / physiology
TL;DR: In this review, the inositol family of negatively charged phospholipids and their functions as molecular sensors and regulators of metabolic flux in plants are discussed. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2010 journal article

Basal Signaling Regulates Plant Growth and Development

PLANT PHYSIOLOGY, 154(2), 439–443.

By: W. Boss n, H. Sederoff n , Y. Im n, N. Moran  n, A. Grunden n  & I. Perera n 

Contributors: W. Boss n, H. Sederoff n , Y. Im n, N. Moran  n, A. Grunden n  & I. Perera n 

MeSH headings : Plant Development; Plant Physiological Phenomena; Second Messenger Systems
TL;DR: The term signal transduction refers to the classical paradigm where an external stimulus is sensed and initiates an increase in second messengers and each second messenger transmits and amplifies the signal by activating a subset of downstream pathways. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science; OpenAlex)
13. Climate Action (Web of Science)
Sources: Web Of Science, NC State University Libraries, ORCID
Added: August 6, 2018

2009 journal article

Expression of Pyrococcus furiosus Superoxide Reductase in Arabidopsis Enhances Heat Tolerance

PLANT PHYSIOLOGY, 151(2), 893–904.

By: Y. Im n, M. Ji n, A. Lee n, R. Killens n, A. Grunden n  & W. Boss n

MeSH headings : Adaptation, Physiological; Arabidopsis / genetics; Arabidopsis / metabolism; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Ascorbate Peroxidases; Chlorophyll / metabolism; Gene Expression Regulation, Plant; Germination; Heat-Shock Response; Hot Temperature; Hydrogen Peroxide / metabolism; Immunoprecipitation; Oxidoreductases / genetics; Oxidoreductases / metabolism; Peroxidases / metabolism; Plant Extracts / metabolism; Plant Leaves / metabolism; Plant Roots / metabolism; Plants, Genetically Modified; Pyrococcus furiosus / enzymology; RNA, Messenger / genetics; RNA, Messenger / metabolism; Seedlings / enzymology; Seeds / metabolism
TL;DR: It is shown that P. furiosus SOR can be produced as a functional enzyme in planta and that plants producing SOR have enhanced tolerance to heat, light, and chemically induced ROS. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2008 journal article

Phosphatidylinositol (4,5)Bisphosphate Inhibits K+-Efflux Channel Activity in NT1 Tobacco Cultured Cells

PLANT PHYSIOLOGY, 149(2), 1127–1140.

By: X. Ma n, O. Shor  n, S. Diminshtein n, L. Yu  n, Y. Im n, I. Perera n , A. Lomax n, W. Boss n, N. Moran  n

MeSH headings : Abscisic Acid / pharmacology; Calcium / pharmacology; Calcium / physiology; Cells, Cultured; Drosophila Proteins / drug effects; Drosophila Proteins / physiology; Kinetics; Phosphatidylinositol 4,5-Diphosphate / metabolism; Phosphatidylinositol 4,5-Diphosphate / pharmacology; Potassium / physiology; Potassium Channel Blockers / pharmacology; Potassium Channels / drug effects; Potassium Channels / physiology; Potassium Channels, Tandem Pore Domain / antagonists & inhibitors; Potassium Channels, Tandem Pore Domain / physiology; Tobacco / cytology; Tobacco / drug effects; Tobacco / physiology
TL;DR: Short-term manipulations decreasing PtdInsP2 levels in the High PIs, such as pretreatment with the phytohormone abscisic acid or neutralizing the bath solution from pH 5.6 to pH 7, increased IK (i.e. Ntork activity), consistent with NtORK inhibition by the negatively charged PtdinsP2 in the internal plasma membrane leaflet. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
3. Good Health and Well-being (OpenAlex)
13. Climate Action (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2007 article

Arabidopsis phosphatidylinositol phosphate kinase 1 binds F-actin and recruits phosphatidylinositol 4-kinase beta 1 to the actin cytoskeleton (Retracted article. See vol. 284, pg. 16060, 2009)

Davis, A. J., Im, Y. J., Dubin, J. S., Tomer, K. B., & Boss, W. F. (2007, May 11). JOURNAL OF BIOLOGICAL CHEMISTRY, Vol. 282, pp. 14121–14131.

By: A. Davis n, Y. Im n, J. Dubin*, K. Tomer* & W. Boss n

MeSH headings : 1-Phosphatidylinositol 4-Kinase / genetics; 1-Phosphatidylinositol 4-Kinase / metabolism; Actins / metabolism; Arabidopsis / enzymology; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Cytoskeleton / metabolism; Glutathione Transferase / genetics; Glutathione Transferase / metabolism; Immunoblotting; Mass Spectrometry; Phosphatidylinositol Phosphates; Phosphotransferases (Alcohol Group Acceptor) / genetics; Phosphotransferases (Alcohol Group Acceptor) / metabolism; Recombinant Fusion Proteins / genetics; Recombinant Fusion Proteins / metabolism
UN Sustainable Development Goal Categories
Source: Web Of Science
Added: August 6, 2018

2007 journal article

Increasing plasma membrane phosphatidylinositol(4,5)bisphosphate biosynthesis increases phosphoinositide metabolism in Nicotiana tabacum

PLANT CELL, 19(5), 1603–1616.

By: Y. Im n, I. Perera n , I. Brglez n, A. Davis n, J. Stevenson-Paulik*, B. Phillippy n, E. Johannes n, N. Allen n, W. Boss n

MeSH headings : Basal Metabolism; Calcium / metabolism; Cell Membrane / enzymology; Cell Membrane / metabolism; Cell Respiration; Green Fluorescent Proteins / metabolism; Humans; Inositol 1,4,5-Trisphosphate / metabolism; Lipid Metabolism; Phosphatidylinositol 4,5-Diphosphate / biosynthesis; Plant Proteins / metabolism; Plants, Genetically Modified; Protein Transport; Recombinant Fusion Proteins / metabolism; Subcellular Fractions / metabolism; Tobacco / cytology; Tobacco / enzymology; Tobacco / genetics; Tobacco / metabolism; Tritium
TL;DR: It is demonstrated that PIPK is flux limiting and that this high rate of PI metabolism increased the energy demands in transgenic tobacco cells. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
3. Good Health and Well-being (OpenAlex)
13. Climate Action (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2006 journal article

The N-terminal membrane occupation and recognition nexus domain of Arabidopsis phosphatidylinositol phosphate kinase 1 regulates enzyme activity

JOURNAL OF BIOLOGICAL CHEMISTRY, 282(8), 5443–5452.

By: Y. Im n, A. Davis n, I. Perera n , E. Johannes n, N. Allen n & W. Boss n

MeSH headings : Amino Acid Motifs / genetics; Arabidopsis / enzymology; Arabidopsis / genetics; Arabidopsis Proteins / genetics; Arabidopsis Proteins / metabolism; Cell Membrane / enzymology; Cell Membrane / genetics; Escherichia coli / enzymology; Escherichia coli / genetics; Lipids / genetics; Minor Histocompatibility Antigens; Phosphotransferases (Alcohol Group Acceptor) / genetics; Phosphotransferases (Alcohol Group Acceptor) / metabolism; Protein Structure, Tertiary / genetics; Tobacco / enzymology; Tobacco / genetics
TL;DR: It is concluded that the MORN peptide can regulate both the function and distribution of the enzyme in a manner that is sensitive to the lipid environment. (via Semantic Scholar)
UN Sustainable Development Goal Categories
3. Good Health and Well-being (Web of Science; OpenAlex)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2005 journal article

Characterization and comparative analysis of Arabidopsis phosphatidylinositol phosphate 5-kinase 10 reveals differences in Arabidopsis and human phosphatidylinositol phosphate kinases

FEBS LETTERS, 579(16), 3427–3432.

By: I. Perera n , A. Davis n, D. Galanopilou, Y. Im n & W. Boss n

author keywords: phosphatidylinositol phosphate kinase; lipid kinase; Arabidopsis
MeSH headings : Amino Acid Sequence; Arabidopsis / enzymology; Arabidopsis / genetics; Arabidopsis Proteins / chemistry; Arabidopsis Proteins / genetics; Arabidopsis Proteins / isolation & purification; Humans; Kinetics; Molecular Sequence Data; Phosphatidylinositol Phosphates / chemistry; Phosphotransferases (Alcohol Group Acceptor) / chemistry; Phosphotransferases (Alcohol Group Acceptor) / genetics; Phosphotransferases (Alcohol Group Acceptor) / isolation & purification; Phosphotransferases (Alcohol Group Acceptor) / metabolism; Sequence Alignment; Substrate Specificity; Transcription, Genetic
TL;DR: Comparative analysis of recombinant AtPIPK10 and AtPipK1 with recombinant HsPIPKIα reveals that the Arabidopsis enzymes have roughly 200‐ and 20‐fold lower V max/K m, respectively, which reveal one explanation for the longstanding mystery of the relatively low phosphatidylinositol‐(4,5)‐bisphosphate:phosphatidic acid‐4‐ph phosphate ratio in terrestrial plants. (via Semantic Scholar)
UN Sustainable Development Goal Categories
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

2005 journal article

Production of a thermostable archaeal superoxide reductase in plant cells

FEBS LETTERS, 579(25), 5521–5526.

By: Y. Im n, M. Ji n, A. Lee n, W. Boss n & A. Grunden n 

author keywords: archaeal; heat-stress; hyperthermophile; plant; reactive oxygen species; superoxide dismutase; superoxide reductase
MeSH headings : Archaeal Proteins / analysis; Archaeal Proteins / biosynthesis; Archaeal Proteins / genetics; Cells, Cultured; Cytoplasm / chemistry; Enzyme Stability; Green Fluorescent Proteins / analysis; Green Fluorescent Proteins / biosynthesis; Hot Temperature; Oxidoreductases / analysis; Oxidoreductases / biosynthesis; Oxidoreductases / genetics; Plants, Genetically Modified / cytology; Plants, Genetically Modified / genetics; Plants, Genetically Modified / metabolism; Pyrococcus furiosus / enzymology; Recombinant Fusion Proteins / analysis; Recombinant Fusion Proteins / biosynthesis; Superoxides / metabolism; Tobacco / cytology; Tobacco / genetics; Tobacco / metabolism
TL;DR: The Archaeal SOR provides a novel mechanism to reduce superoxide and demonstrates the potential for using archaeal genes to alter eukaryotic metabolism. (via Semantic Scholar)
UN Sustainable Development Goal Categories
2. Zero Hunger (Web of Science)
13. Climate Action (Web of Science)
Sources: Web Of Science, NC State University Libraries
Added: August 6, 2018

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