Sang Chul Choi

Works (4)

Updated: July 5th, 2023 15:54
Download BibTeX Download Plain Text View JSON

2009 journal article

Estimates of natural selection due to protein tertiary structure inform the ancestry of biallelic loci

Gene, 441(1-2), 45–52.

By: S. Choi n, E. Stone n, H. Kishino * & J. Thorne n

co-author countries: Japan 🇯🇵 United States of America 🇺🇸
MeSH headings : Evolution, Molecular; Gene Frequency; Humans; Polymorphism, Single Nucleotide; Protein Structure, Tertiary; Proteins / genetics; Selection, Genetic
Source: NC State University Libraries
Added: August 6, 2018

2008 journal article

Basing population genetic inferences and models of molecular evolution upon desired stationary distributions of DNA or protein sequences

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 363(1512), 3931–3939.

By: S. Choi n, B. Redelings n & J. Thorne n

co-author countries: United States of America 🇺🇸
author keywords: variable-length Markov model; profile hidden Markov model; insertion-deletion model; scaled selection coefficient; fitness; Pfam
MeSH headings : Computer Simulation; DNA / genetics; Evolution, Molecular; Genetics, Population; INDEL Mutation / genetics; Markov Chains; Models, Genetic; Population Density; Proteins / genetics; Selection, Genetic
Source: Web Of Science
Added: August 6, 2018

2007 journal article

Population genetics without intraspecific data

MOLECULAR BIOLOGY AND EVOLUTION, 24(8), 1667–1677.

By: J. Thorne n, S. Choi n, J. Yu *, P. Higgs * & H. Kishino *

co-author countries: Canada 🇨🇦 Germany 🇩🇪 Denmark 🇩🇰 Japan 🇯🇵 United States of America 🇺🇸
author keywords: dependence among sites; fixation probability; protein structure; RNA structure
MeSH headings : Animals; Annexin A5 / genetics; Computational Biology; Computer Simulation; Evolution, Molecular; Genetic Variation; Genetics, Population; Likelihood Functions; Mice; Models, Biological; Models, Genetic; Nucleic Acid Conformation; Phenotype; Phylogeny; RNA / chemistry; RNA / genetics; Rats; Selection, Genetic
Source: Web Of Science
Added: August 6, 2018

2007 journal article

Quantifying the impact of protein tertiary structure on molecular evolution

MOLECULAR BIOLOGY AND EVOLUTION, 24(8), 1769–1782.

By: S. Choi*, A. Hobolth, D. Robinson, H. Kishino & J. Thorne*

author keywords: molecular evolution; protein structure impact; Gene Ontology; MCMC; Bayes factor
MeSH headings : Bayes Theorem; Computational Biology; Computer Simulation; Data Interpretation, Statistical; Evolution, Molecular; Protein Structure, Tertiary; Proteins / chemistry; Proteins / genetics; Sequence Alignment
Source: Web Of Science
Added: August 6, 2018