@article{sullivan_parks_cubeta_gallup_melton_moyer_shew_2010, title={An Assessment of the Genetic Diversity in a Field Population of Phytophthora nicotianae with a Changing Race Structure}, volume={94}, ISSN={["1943-7692"]}, DOI={10.1094/pdis-94-4-0455}, abstractNote={ One hundred fifty-three isolates of Phytophthora nicotianae that were collected over a 4-year period from a single field were subjected to amplified fragment length polymorphism (AFLP) analysis to investigate the effect of different types of resistance in tobacco (Nicotiana tabacum) on genetic diversity in the pathogen population. No race 1 isolates were detected in the field prior to initiating the study, but the race was present in multiple plots by the end of the 4-year period. There were 102 race 0 isolates and 51 race 1 isolates characterized. Seventy-six of the 153 isolates had a unique AFLP profile, whereas the remaining 77 isolates were represented by 27 AFLP profiles shared by at least two isolates. Isolates of both races were found in both the unique and shared AFLP profile groups. Twenty-three of the AFLP profiles were detected in multiple years, indicating a clonal component to the pathogen population. Race 1 isolates that were detected over multiple years were always obtained from the same plot. No race 1 profile was found in more than one plot, confirming the hypothesis that the multiple occurrences of the race throughout the field were the result of independent events and not pathogen spread. Three identical race 0 AFLP profiles occurred in noncontiguous plots, and in each case, the plots contained the same partially resistant variety. Cluster analysis provided a high level of bootstrap support for 41 isolates in 19 clusters that grouped primarily by race and rotation treatment. Estimates of genetic diversity ranged from 0.365 to 0.831 and varied depending on tobacco cultivar planted and race. When averaged over all treatments, diversity in race 1 isolates was lower than in race 0 isolates at the end of each season. Deployment of single-gene resistance initially decreased genetic diversity of the population, but the diversity increased each year, indicating the pathogen was adapting to the host genotypes deployed in the field. }, number={4}, journal={PLANT DISEASE}, author={Sullivan, M. J. and Parks, E. J. and Cubeta, M. A. and Gallup, C. A. and Melton, T. A. and Moyer, J. W. and Shew, H. D.}, year={2010}, month={Apr}, pages={455–460} }
 @article{gallup_shew_2010, title={Occurrence of Race 3 of Phytophthora nicotianae in North Carolina, the Causal Agent of Black Shank of Tobacco}, volume={94}, ISSN={["0191-2917"]}, DOI={10.1094/pdis-94-5-0557}, abstractNote={ Black shank, caused by the oomycete Phytophthora nicotianae, causes significant annual yield losses in tobacco. Race 3 of P. nicotianae is reported here for the first time from North Carolina. It was identified from a North Carolina tobacco field with a history of tobacco varieties with Phl gene resistance and numerous field sites with no known deployment of varieties with the Phl gene. Race 3 was originally described from cigar-wrapper tobacco in Connecticut in the 1970s, but has not been reported in any other location since. Race 3 was defined as overcoming the Phl gene from Nicotiana longiflora but not the Php gene from N. plumbaginifolia. Stem and root inoculations were conducted on a set of host differentials to determine the virulence of North Carolina isolates. Stem inoculation was unable to distinguish between races 0 and 3 of P. nicotianae and is not a reliable method of identifying these virulence types. Race 1 gave a unique phenotype using stem inoculation. Root inoculation was the only reliable means of distinguishing between races 0 and 3. This is the first report of race 3 in North Carolina and the first report of damage to seedlings from root inoculations and to plants containing the Phl gene in naturally infested soil. }, number={5}, journal={PLANT DISEASE}, author={Gallup, C. A. and Shew, H. D.}, year={2010}, month={May}, pages={557–562} }
 @article{taylor_pasche_gallup_shew_gudmestad_2008, title={A foliar blight and tuber rot of potato caused by Phytophthora nicotianae: New occurrences and characterization of isolates}, volume={92}, ISSN={["0191-2917"]}, DOI={10.1094/pdis-92-4-0492}, abstractNote={ Phytophthora spp. are pathogenic to many plant species worldwide, and late blight, caused by Phytophthora infestans, and pink rot, caused by P. erythroseptica, are two important diseases of potato. Another Phytophthora sp., P. nicotianae, was recovered from pink-rot-symptomatic tubers collected from commercial fields in Nebraska, Florida, and Missouri in 2005, 2006, and 2007, respectively. P. nicotianae also was recovered from foliage obtained from commercial potato fields in Nebraska and Texas exhibiting symptoms very similar to those of late blight. Isolates of P. cactorum also were recovered from foliar infections in a commercial potato field in Minnesota in 2005. Natural infection of potato foliage by P. cactorum and infection of wounded potato tuber tissue via inoculation with zoospores of P. capsici are reported here for the first time. Isolates of P. nicotianae, regardless of origin, were primarily of the A1 mating type. All isolates of P. nicotianae and P. cactorum were sensitive to the fungicide mefenoxam. Optimum growth of P. nicotianae, P. erythroseptica, and P. cactorum in vitro occurred at 25°C; however, only P. nicotianae sustained growth at 35°C. Regardless of the tissue of origin, all isolates of P. nicotianae and P. cactorum were capable of infecting potato tubers and leaves. However, isolates of P. nicotianae were less aggressive than P. erythroseptica isolates only when tubers were not wounded prior to inoculation. Pink rot incidence varied significantly among potato cultivars following inoculation of nonwounded tubers with zoospores of P. nicotianae, ranging from 51% in Red Norland to 19% in Atlantic. Phytophthora spp. also differed significantly in their ability to infect potato leaves. Highest infection frequencies were obtained with P. infestans and levels of infection varied significantly among P. nicotianae isolates. The rate of foliar lesion expansion was similar among isolates of P. nicotianae and P. infestans. Whereas P. infestans infections yielded profuse sporulation, no sporulation was observed with foliar infections of P. nicotianae. }, number={4}, journal={PLANT DISEASE}, author={Taylor, Raymond J. and Pasche, Julie S. and Gallup, Courtney A. and Shew, H. David and Gudmestad, Neil C.}, year={2008}, month={Apr}, pages={492–503} }