Alon Greenbaum

Moatti, A., Connard, S., De Britto, N., Dunn, W. A., Rastogi, S., Rai, M., … Greenbaum, A. (2024). Surgical procedure of intratympanic injection and inner ear pharmacokinetics simulation in domestic pigs. FRONTIERS IN PHARMACOLOGY, 15. https://doi.org/10.3389/fphar.2024.1348172

Moatti, A., Silkstone, D., Martin, T., Abbey, K., Hutson, K. A., Fitzpatrick, D. C., … Greenbaum, A. (2023). Assessment of drug permeability through an ex vivo porcine round window membrane model. ISCIENCE, 26(6). https://doi.org/10.1016/j.isci.2023.106789

Zhang, X., Xiao, G., Johnson, C., Cai, Y., Horowitz, Z. K., Mennicke, C., … Ghashghaei, H. T. (2023). Bulk and mosaic deletions of Egfr reveal regionally defined gliogenesis in the developing mouse forebrain. ISCIENCE, 26(3). https://doi.org/10.1016/j.isci.2023.106242

Cai, Y., Zhang, X., Li, C., Ghashghaei, H. T., & Greenbaum, A. (2023). COMBINe enables automated detection and classification of neurons and astrocytes in tissue-cleared mouse brains. CELL REPORTS METHODS, 3(4). https://doi.org/10.1016/j.crmeth.2023.100454

Rai, M. R., Li, C., Ghashghaei, H. T., & Greenbaum, A. (2023). Deep learning-based adaptive optics for light sheet fluorescence microscopy. BIOMEDICAL OPTICS EXPRESS, 14(6), 2905–2919. https://doi.org/10.1364/BOE.488995

Newell, A. J., Kapps, V. A., Cai, Y., Rai, M. R., St Armour, G., Horman, B. M., … Patisaul, H. B. (2023). Maternal organophosphate flame retardant exposure alters the developing mesencephalic dopamine system in fetal rat. TOXICOLOGICAL SCIENCES, 191(2), 357–373. https://doi.org/10.1093/toxsci/kfac137

Moatti, A., Cai, Y., Li, C., Popowski, K. D., Cheng, K., Ligler, F. S., & Greenbaum, A. (2023). Tissue clearing and three-dimensional imaging of the whole cochlea and vestibular system from multiple large-animal models. STAR PROTOCOLS, 4(2). https://doi.org/10.1016/j.xpro.2023.102220

LI, C., Moatti, A., Zhang, X., Ghashghaei, H. T., & Greenbaum, A. (2022, January 1). Deep learning-based autofocus method enhances image quality in light-sheet fluorescence microscopy: publishers note (vol 12, pg 5214, 2021). BIOMEDICAL OPTICS EXPRESS, Vol. 13, pp. 373–373. https://doi.org/10.1364/BOE.450829

Li, C., Rai, M. R., Ghashghaei, H. T., & Greenbaum, A. (2022). Illumination angle correction during image acquisition in light-sheet fluorescence microscopy using deep learning. BIOMEDICAL OPTICS EXPRESS, 13(2), 888–901. https://doi.org/10.1364/BOE.447392

Popowski, K. D., Moatti, A., Scull, G., Silkstone, D., Lutz, H., López de Juan Abad, B., … Cheng, K. (2022). Inhalable dry powder mRNA vaccines based on extracellular vesicles. Matter, 5(9), 2960–2974. https://doi.org/10.1016/j.matt.2022.06.012

Moatti, A., Li, C., Sivadanam, S., Cai, Y., Ranta, J., Piedrahita, J. A., … Greenbaum, A. (2022). Ontogeny of cellular organization and LGR5 expression in porcine cochlea revealed using tissue clearing and 3D imaging. ISCIENCE, 25(8). https://doi.org/10.1016/j.isci.2022.104695

Rai, M. R., Li, C., & Greenbaum, A. (2022). Quantitative analysis of illumination and detection corrections in adaptive light sheet fluorescence microscopy. BIOMEDICAL OPTICS EXPRESS, 13(5), 2960–2974. https://doi.org/10.1364/BOE.454561

Cai, Y., Zhang, X., Kovalsky, S. Z., Ghashghaei, H. T., & Greenbaum, A. (2021). Detection and classification of neurons and glial cells in the MADM mouse brain using RetinaNet. PLOS ONE, 16(9). https://doi.org/10.1371/journal.pone.0257426

Carter, A., Popowski, K., Cheng, K., Greenbaum, A., Ligler, F. S., & Moatti, A. (2021, September 24). Enhancement of Bone Regeneration Through the Converse Piezoelectric Effect, A Novel Approach for Applying Mechanical Stimulation. BIOELECTRICITY, Vol. 9. https://doi.org/10.1089/bioe.2021.0019

Kahan, A., Greenbaum, A., Jang, M. J., Robinson, J. E., Cho, J. R., Chen, X., … Gradinaru, V. (2021). Light-guided sectioning for precise in situ localization and tissue interface analysis for brain-implanted optical fibers and GRIN lenses. CELL REPORTS, 36(13). https://doi.org/10.1016/j.celrep.2021.109744

Treweek, J. B., Beres, A., Johnson, N., & Greenbaum, A. (2021). Phenotyping Intact Mouse Bones Using Bone CLARITY. SKELETAL DEVELOPMENT AND REPAIR, 2 EDITION, Vol. 2230, pp. 217–230. https://doi.org/10.1007/978-1-0716-1028-2_13

Ravindra Kumar, S., Miles, T. F., Chen, X., Brown, D., Dobreva, T., Huang, Q., … Gradinaru, V. (2020). Multiplexed Cre-dependent selection yields systemic AAVs for targeting distinct brain cell types. NATURE METHODS, 17(5), 541-+. https://doi.org/10.1038/s41592-020-0799-7

Moatti, A., Cai, Y., Li, C., Sattler, T., Edwards, L., Piedrahita, J., … Greenbaum, A. (2020). Three-dimensional imaging of intact porcine cochlea using tissue clearing and custom-built light-sheet microscopy. BIOMEDICAL OPTICS EXPRESS, 11(11), 6181–6196. https://doi.org/10.1364/BOE.402991