@article{petrone_bartlett_jiang_korenek_vintila_tenekjian_yancy jr_david_kleiner_2024, title={A pilot study of metaproteomics and DNA metabarcoding as tools to assess dietary intake in humans}, volume={12}, ISSN={["2042-650X"]}, url={https://doi.org/10.1039/D4FO02656J}, DOI={10.1039/d4fo02656j}, abstractNote={In a pilot study of five individuals, we evaluated the concordance between conventional diet records and DNA- and protein-based biomarkers of food intake in their stool.}, journal={FOOD & FUNCTION}, author={Petrone, Brianna L. and Bartlett, Alexandria and Jiang, Sharon and Korenek, Abigail and Vintila, Simina and Tenekjian, Christine and Yancy Jr, William S. and David, Lawrence A. and Kleiner, Manuel}, year={2024}, month={Dec} }
 @article{kleiner_kouris_violette_d'angelo_liu_korenek_tolic_sachsenberg_mccalder_lipton_et al._2023, title={Ultra-sensitive isotope probing to quantify activity and substrate assimilation in microbiomes}, volume={11}, ISSN={["2049-2618"]}, DOI={10.1186/s40168-022-01454-1}, abstractNote={Stable isotope probing (SIP) approaches are a critical tool in microbiome research to determine associations between species and substrates, as well as the activity of species. The application of these approaches ranges from studying microbial communities important for global biogeochemical cycling to host-microbiota interactions in the intestinal tract. Current SIP approaches, such as DNA-SIP or nanoSIMS allow to analyze incorporation of stable isotopes with high coverage of taxa in a community and at the single cell level, respectively, however they are limited in terms of sensitivity, resolution or throughput.}, number={1}, journal={MICROBIOME}, author={Kleiner, Manuel and Kouris, Angela and Violette, Marlene and D'Angelo, Grace and Liu, Yihua and Korenek, Abigail and Tolic, Nikola and Sachsenberg, Timo and McCalder, Janine and Lipton, Mary S. S. and et al.}, year={2023}, month={Feb} }